Larimichthys crocea (large yellow croaker): 104930692
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Entry
104930692 CDS
T04659
Symbol
rbbp5
Name
(RefSeq) retinoblastoma-binding protein 5 isoform X1
KO
K14961
COMPASS component SWD1
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lco03036
]
104930692 (rbbp5)
Chromosome and associated proteins [BR:
lco03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
104930692 (rbbp5)
COMPASS/SET1 complex (yeast)
104930692 (rbbp5)
MLL-HCF complex
104930692 (rbbp5)
MLL3/MLL4 complex
104930692 (rbbp5)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40
Beta-prop_EML
WDR55
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_IFT140_1st
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
Beta-prop_SPT8
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_LRRK2
Beta-prop_WDR75_1st
WDR54
Beta-prop_NUP159_NUP214
Beta-prop_SCAP
Beta-prop_WDR11_1st
Beta-prop_TEP1_C
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
104930692
NCBI-ProteinID:
XP_027134972
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Position
VI:19730820..19739484
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AA seq
560 aa
AA seq
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MNLELLESFGQNYPEEADGTLDCISMALTCTFNRWGTLLAVGCNDGRIVIWDFLTRGIAK
IISAHIHPVCSLCWSRDGHKLVSASTDNIVSQWDVLTGDCDQRFRFPSPILKLQCHPRDM
DKVLVCPMKSAPVLLTLSDSKHVVLPVDDDSDLNVVAAFDRRGEYIYTGNAKGKILVLNT
NTQELVASFRVTTGTSNTTAIKSIEFARKGSCFLINTADRIIRVYDGREILTCGRDGEPE
PMQKLQDLVNRTPWKRCCFSGDGEYIVAGSARQHALYIWEKSIGNLVKILHGTRGELLLD
VAWHPVRPIIASISSGVVSIWAQNQVENWSAFAPDFKELDENVEYEERESEFDIEDEDKS
EPEQTGADAAEDEEVDVTTVDPIVAFCSSDEELEDYKALLYLPIAPEVEDPEENPFGPPP
EASVQAAGPEDALAGGEKKQRQPSSEGGPAKKKARTTTIELQGVPSDEVHPLLGVKGDGK
SKKKTAGRPKGSKGKDKDFPFRPKPYRGDRPSFPVEALGSSGPGGGGGGGGMKGRAEGGL
ATAGSLVAQAYKQHDIGGMD
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgaacctcgagctgctcgaatcgttcgggcagaactatccagaggaggcagatggcacc
ctggactgcatcagcatggccctcacctgcaccttcaaccgctggggcaccctgctggct
gtgggctgcaacgatggccgcatcgtcatctgggacttcctcacacggggcatcgccaaa
atcatcagcgcacacattcacccagtctgctctttatgttggagtcgagacggacacaag
ctggtgagtgcctccacagacaacattgtctcgcagtgggacgtcctcactggagactgc
gaccagaggtttcgcttcccctcacccatcctgaaactgcagtgccaccccagagacatg
gacaaggtgctggtgtgtcccatgaagtcggctcccgtcctgctgactctgtcagactcc
aaacacgtcgtcctgcctgtggacgacgactctgacctgaacgtcgtggcagcctttgac
aggcggggcgagtacatctacactggcaacgccaaaggaaagattctggtgttgaacaca
aacactcaggagttggtggcttctttcagagtgacaactggcaccagcaacaccaccgcc
atcaaatcgattgaatttgctcgcaagggcagttgcttcctcataaacacagcagaccga
atcatcagggtgtatgacggcagggagattctgacctgtggcagagacggtgaacctgaa
cccatgcagaaactacaggacttggtcaacaggactccgtggaagcgctgctgtttctcc
ggcgatggcgagtacatcgtggccggttcagccaggcagcacgccctctacatctgggag
aagagcattggcaacctggtgaagatcctgcatgggaccagaggagagctgctgctggat
gtggcttggcatcctgtccgtccaatcatcgcctccatctccagtggagtggtctccatc
tgggctcagaaccaagtggaaaactggagtgcttttgctccggacttcaaagagctggat
gagaacgtggaatacgaggagcgagagtctgaatttgacattgaggacgaagacaagagt
gaacccgagcagacaggtgcagatgctgcagaggatgaagaggtggatgtcaccactgtt
gaccccatagttgctttttgcagcagcgatgaggagcttgaggactataaggccctcctg
tacctgcctatcgcccctgaggtcgaagatccagaggaaaaccccttcggccccccgcca
gaagcctccgtccaggctgcgggcccggaggacgcgttggctggcggcgagaagaagcag
aggcagccttcgtctgaaggagggccggccaagaagaaggctcgcaccaccaccattgaa
ctgcagggggtgccgagtgatgaggtgcaccccctactgggcgtgaaaggggatggcaag
tccaagaagaagacagcaggccggcccaaaggttccaaaggtaaagacaaagacttcccc
ttcaggccgaagccctacaggggcgatcggccctccttccccgtggaggccctgggcagc
tctggcccaggtggaggaggaggaggaggagggatgaagggcagagcagaggggggcctg
gccacagcagggagtctggtcgcacaggcgtacaaacaacacgacattggagggatggac
tga
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