Larimichthys crocea (large yellow croaker): 104930713
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Entry
104930713 CDS
T04659
Symbol
lrrc4b
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
104930713 (lrrc4b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lco04515
]
104930713 (lrrc4b)
Cell adhesion molecules [BR:
lco04515
]
Immunoglobulin superfamily
NGL family
104930713 (lrrc4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_9
LRR_14
ig
V-set
Ig_2
LRRNT
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
104930713
NCBI-ProteinID:
XP_019111374
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All DBs
Position
XII:complement(29342142..29377133)
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AA seq
734 aa
AA seq
DB search
MRIATLTCLPGPSPFLFLLAQLLLRLLLPGPELVGAASSCPSLCTCSNQASRVICTRQNL
EEVPESISVNTRYLNLQENSIQVIKSDTFKHLRHLEILQLSKNQIRQIEVGAFNGLPNLN
TLELFDNRLTLVPSHAFEYLSKLRELWLRNNPIETLPGYAFHRVPSLRRLDLGELKKLDF
ISDAAFVGLINLRYLNLGMCGLKDIPKLTALVRLEELELSGNRLEIIRPGSFQGLVSLRK
LWLMHSQVSVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLHQLERVHLNHNPWICNC
DVLWLSWWLKETVPSNTTCCARCHAPPVLKGKYIGELDQSHFTCYAPVIVEPPTDLNVTE
GMAAELKCRTSTSTTSVNWITPNGTLMTHGSYRVRISVLHDGTLNFTNVTLRDTGQYTCM
VTNAAGNTTATAVLNVTAADASVNYTYFTTVTVETVETTGEEESALVDINETLIRVHPGP
TPSGHLWPDRVSTTASSLSAGWSSSSPQTTRPTFTVPITEPGFSGLDDVMKTTKIIIGCF
VAITFMAAVMLVVFYKLRKQHQLHKHHGPARAIEIINVEDELGAGASGRGSGISGGSTMT
QSGSSGIGGGQSLRLHHPEIVNLPNLARSEHLNHYYKTHHFNNNMMGLGMSTGTGVGLNN
NNNPSPCSQNTSISCSQVPTSTSGGPTTGGTLPSPVPLPQLGLHSSLKGLMGKSQNEPLL
FKSGSKENVQETQI
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcgccacgctgacctgccttcccggcccttcccccttcctctttctattggcc
cagctgctactgcggctcctcctccctgggccggagttggtgggagccgcctcttcctgc
ccctccctctgcacctgctccaatcaggccagccgagtcatctgcaccaggcaaaacctg
gaggaggtgcccgagagcatatcagtcaacacgcgatacctcaacctgcaggagaactcc
atacaggttatcaagtccgacactttcaagcacttgagacaccttgagatcctccagctc
tccaagaatcagatccgtcagattgaagtcggagcattcaatggcctccccaacctcaat
acactggagctcttcgacaaccgcctcacactggtgccatcacatgccttcgagtacctc
agcaagctgcgagagctgtggctgcgcaacaaccccattgagactctgccaggctatgcc
ttccaccgcgtgccctcgctacgacgcctggacctgggggagctcaagaagttggatttc
atctctgacgcggcctttgttggcctcatcaatctacgatacctgaacctgggcatgtgt
gggctgaaggacattcccaaactgacggctcttgtgcgtttggaggagttggagctgtca
ggaaaccggctggagatcatccgacctggttctttccagggcctggtgtctctccgcaag
ctgtggcttatgcactcacaggtgtccgtcattgagcgcaacgcttttgatgacctgaaa
aacctggaagagctcaacctgtcccataactccttgcactccttgccccatgacctcttc
actccccttcaccagctggagagagtacacctgaaccacaacccctggatctgcaactgt
gatgtgctttggcttagttggtggttgaaagagacggtgcccagcaacaccacctgctgt
gcccgctgccacgctcccccagtcttaaagggcaaatacattggagagcttgaccagagc
cacttcacttgctacgcgcctgtcattgtggagccacctacagacctcaatgtcactgag
ggaatggctgctgagctcaagtgtcgcacaagcacctccacaacatctgtaaattggatc
acacctaatggcactttaatgacccatggctcctaccgggtccggatatccgtcctgcat
gatggcacgctcaacttcacaaatgtcaccctgagagacacgggccagtacacctgcatg
gtcaccaatgctgctggcaataccacggcaaccgctgtcctcaatgtcactgctgctgac
gccagcgtcaactacacctactttacaacagtcaccgtggaaacagtggagacgacggga
gaggaagagtctgcattagtggacatcaatgagactttgatccgtgttcatcctggtccc
actccatcgggccacctgtggccagaccgtgtttccaccacagcctcatctctgtcagcc
ggttggtcctcctcatctcctcagaccacccgacccaccttcactgtgcccatcactgag
ccaggcttctcaggcctggatgatgtgatgaagaccaccaagatcatcatcggctgcttt
gtagccattaccttcatggcagcggtgatgctggtggtgttctacaagctgaggaagcag
caccagctgcataaacaccacggtcccgctcgtgccatcgagatcatcaacgtagaggat
gagctgggggccggggctagcggacggggcagcggcatctccggaggctccaccatgacg
cagagcggaagcagtggaataggaggaggccagagcctcaggctgcaccacccagagata
gtcaacctgccaaacctggcccgatcggagcacctcaaccactactacaaaacccatcac
ttcaacaacaacatgatgggcctgggcatgagcacgggtactggtgttggcctcaacaac
aacaacaacccctcaccttgctctcagaacacgtccatatcctgttcccaggttccaacc
tccaccagtggaggaccaaccacaggtggcaccctgccctctcctgtgcccctgccccag
ttgggtctccacagttctctgaaaggccttatggggaaaagccagaatgagcccctgctt
tttaagagtggctccaaggaaaatgtgcaagagactcaaatttga
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