Larimichthys crocea (large yellow croaker): 104930803
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Entry
104930803 CDS
T04659
Name
(RefSeq) tiggy-winkle hedgehog protein
KO
K11988
sonic hedgehog
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
104930803
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lco01002
]
104930803
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
lco00536
]
104930803
Peptidases and inhibitors [BR:
lco01002
]
Cysteine peptidases
Family C46: hedgehog family
104930803
Glycosaminoglycan binding proteins [BR:
lco00536
]
Heparan sulfate / Heparin
Morphogens
104930803
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Hom_end_hint
Hint_2
Vint
Ribosomal_S6e
Motif
Other DBs
NCBI-GeneID:
104930803
NCBI-ProteinID:
XP_010743984
LinkDB
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Position
II:complement(473784..478227)
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AA seq
412 aa
AA seq
DB search
MVLMRVMMLSVSLCLLLLASVGSGCGPGRGYGKRRHPKKLTPLSLKQFIPNVAEKTLGAS
GKYEGKITRNSERFKDLTPNYNPDIIFKDEEKTNADRLMTQRCKDKLNSLAISVMNQWPG
VKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDKSKYGMLSRLAVEAGFDWVYYESKA
HIHCSVKAENSVAAKSGGCFRGSSMVILADGRTKPLEELQVGNKVLAADRQGNLVPSDFL
MFMDQDRQITREFHVLETDEPRRRLTLTPTHLVFVMNNNSTNSSDIRAVFASNVKLGQWL
LAVGDDRSDHLIPTRVTKISVEHYEGSYAPVTCHGTIIIDQVLASCYAVVEDHDLAHWVF
APVRLWHSFLSLVGMVKELSSIHQADGVHWYPELLYHMGGWLLDSSSFHPQS
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggtcctgatgcgagtgatgatgctgtcggtgtccctctgcctgctgctgctggcgtcc
gtcggctcaggttgtggaccgggcaggggatacgggaagcggaggcaccccaagaagctg
acacccctgtctctgaaacagtttattcccaacgtggcagagaagaccctgggagccagc
ggcaagtatgaaggcaagatcacccgcaactcggagaggttcaaggacctgactccaaac
tacaaccccgacatcatatttaaagatgaggagaagaccaacgcagaccggctcatgaca
caaaggtgtaaggacaagctgaactctctggccatttcagtcatgaatcagtggcccggg
gttaaacttcgggtcacagaaggctgggatgaggacggccatcattctgaggagtctttg
cactatgagggccgagcggtggacatcaccacctcagaccgggataagagcaagtacggc
atgctgtccaggctggctgtggaggcaggcttcgactgggtctactatgagtccaaagct
cacatccactgctctgtgaaagcagaaaactctgtggcagccaaatctggtggttgtttc
cgtggttcgtccatggtgatcctggcagatgggaggactaaaccactagaggagctccag
gttgggaacaaggtgctggcagctgaccgacaaggaaatcttgttcccagtgactttctt
atgttcatggaccaggaccggcagattacacgagaattccatgtcctggagactgacgag
ccacgccgcagactgacgctgactccaactcaccttgtctttgttatgaacaacaacagt
accaacagcagtgacattagagctgtgttcgccagtaatgtaaaactaggacagtggctt
cttgctgttggggatgaccggtcagaccatctcattcctacaagagtgacaaaaatttct
gtggagcattatgaagggtcttatgcacctgtcacatgtcacggaaccatcataatcgac
caggttttggcatcctgctatgcagtggttgaggatcatgaccttgcacactgggttttt
gcaccagtacgactatggcactcattcttgtcactggttgggatggtgaaggagctcagt
agtattcatcaagcggatggggttcactggtatccagagctcctctaccatatgggaggt
tggcttttggacagcagctcttttcacccacaaagctga
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