KEGG   Larimichthys crocea (large yellow croaker): 104930845
Entry
104930845         CDS       T04659                                 
Name
(RefSeq) vertebrate ancient opsin
  KO
K04256  c-opsin
Organism
lco  Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:lco00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:lco01009]
    104930845
  09183 Protein families: signaling and cellular processes
   04030 G protein-coupled receptors [BR:lco04030]
    104930845
Protein phosphatases and associated proteins [BR:lco01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     104930845
G protein-coupled receptors [BR:lco04030]
 Rhodopsin family
  Vision
   Opsin
    104930845
SSDB
Motif
Pfam: 7tm_1 7TM_GPCR_Srw 7TM_GPCR_Srv 7TM_GPCR_Srx 7TM_GPCR_Srsx DUF2975 PMT_4TMC
Other DBs
NCBI-GeneID: 104930845
NCBI-ProteinID: XP_010744034
LinkDB
Position
XII:19872913..19925482
AA seq 407 aa
MIVSNVSLSGCAEVDGALCAGGAAEGQLRGTSYRTTLTPTGNLVVSVCLGFIGTFGLLNN
LLVLVLFCRYKMLRSPINLLLINISISDLLVCVLGTPFSFAASTQGRWLIGDAGCVWYGF
ANSLFGIVSLISLAVLSYERYSTMMTPTEADSTNYCKVSLGIALSWVYSFIWTMPPLFGW
SSYGPEGPGTTCSVNWKAKTTNNISYIICLFIFCLLLPFLVIMLCYGKLLCAIRQVSGIN
SSMSRKREQRVLFMVVIMVICYLLCWLPYGIMALLATFGPPGFVTPEASIIPSVFAKTST
VINPVIYVFMNKQFYRCFQGLLRCEPPRRGSSIKSSSRVATKAGRGQAVSGHRRTNHFPL
MVASLGQPVTTVPQLGPFFEATNDVSKAPSSDTNKPVEVSLEAHFDV
NT seq 1224 nt   +upstreamnt  +downstreamnt
atgatcgtgtccaacgtgagcctgagcggctgcgcggaggtcgacggcgcgctctgcgct
ggaggagcggcggaagggcagctgagggggacctcataccggacaaccctcaccccgaca
gggaacttggtcgtgtctgtgtgcctggggttcatcggcactttcggacttctgaacaac
ctgctggttctcgtcctcttctgccgctacaagatgctgcgatcgcccatcaacctgctc
ctgattaacatttccatcagcgacctgctggtgtgcgtattggggactccgttcagcttc
gcagccagcacgcagggaaggtggctcataggagatgcgggatgcgtgtggtacggcttc
gccaactccctctttggcattgtgtcgctgatctccctggctgtcctctcttacgagcgc
tacagcacaatgatgacccccactgaggcggactccaccaactactgcaaggtctccctg
ggcatcgccctgtcctgggtctactccttcatctggacaatgccaccactctttggatgg
agtagctatggcccagagggtcctggtaccacctgctctgtcaactggaaggccaagacg
acaaataacatatcttacatcatctgcctgtttatcttctgcctccttttgccgttcctg
gtgatcatgttatgctatgggaagctgctgtgcgccatcagacaggtcagcgggatcaat
tcatcaatgagcaggaaacgtgagcagcgcgtgctattcatggtcgtgattatggtgata
tgctacctgttgtgctggctgccgtatggcattatggctctgctggccactttcgggcca
ccaggcttcgtcacgcctgaggcgagcatcatcccctcagtcttcgccaagacgagcaca
gtcatcaacccagtcatctatgtcttcatgaataaacagttttacagatgtttccaaggc
ctgctgcgttgtgagcctcctcgacgaggatcaagcataaagagctcctccagggttgcc
accaaggctggtagaggtcaagcagtctctggtcaccgccgtaccaaccacttcccgtta
atggtagcttcccttggtcaaccggtgaccactgtgccccaattgggccccttctttgaa
gcaacaaatgatgtctccaaagccccctcttcagacaccaacaaacctgtcgaggtatca
ttagaggcccacttcgacgtctga

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