Larimichthys crocea (large yellow croaker): 104931049
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Entry
104931049 CDS
T04659
Name
(RefSeq) collagen alpha-1(XXVIII) chain isoform X1
KO
K23619
collagen type XXVIII alpha
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lco01002
]
104931049
Peptidases and inhibitors [BR:
lco01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
104931049
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GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Kunitz_BPTI
VWA_3
PCC_BT
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
104931049
NCBI-ProteinID:
XP_019110757
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Position
XVIII:14230141..14245550
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AA seq
1235 aa
AA seq
DB search
MLPSVTSVLLVTALTSVWAQDLYDERKTNKKSRVRPVAANLHDGQAILDEDCGLELSFLL
DSSESAKDNHEQEKQFSMNVVDRLQGLRLQTGRTLSLRVALLQYSSHVITEQTFREWRGT
ENFKTRITPIIYIGHGTYTTYAITNMTRIYLEESSPGSIKVAVLLTDGISHPRNPDIFSA
VADAKNQGIKFFTLGITRAANEPANVAQLRLLASSPASQFLHNLQDEDIVEKIVTEITGL
ADEGCPLAQRCSCEKGERGPSGSAGKKGRPGDDGAPGLRGQKGEAGLSGLPGREGSEGKP
GYKGEKGERGECGTPGIKGDRGLEGSVGARGVRGLQGLPGPHGDVGPEGTQGKQGERGPP
GPPGIQGETGIGLPGPKGDMGFQGRAGPPGPHGVGEPGPPGPQGPQGVQGDKGPQGEGFP
GPKGDRGLAGPRGPRGQQGVGIKGERGELGPPGLPGPTGPIGVGIQGEKGVEGPRGPPGS
RGIPGEGLPGPKGDQGLPGEQGGPGERGIGEPGSKGEPGASGVSGLHGLPGEDGAPGQKG
EPGLPGSRGPEGAQGIGTQGEKGDQGLRGIRGLHGPPGIAGPSGPKGERGIPGNQGMPGQ
PGRSISGPKGDLGPAGPPGHIGETGHGLPGPKGDRGHPGPSGPAGPKGEGLVGPLGPPGL
PGLPGEPGSEGIGIPGPKGDIGFRGLPGLPGPPGEGTKGPPGNIGRPGPAGSIGPPGQGI
QGPKGEPGSQGMTGPRGPQGDGFPGAKGDRGLQGERGMKGTKGDLGDAGVPGEAGRPGAK
GEQGLTREDIIKLIKEICGCGVKCKERPMELVFVIDSSESVGPENFEIIKDFVTRLVDRT
TVGRNATRIGLVLYSLDVHLEFNLVRYMNKQDVKQAIRKMPYMGEGTYTGTAIRKATQEA
FFSARPGVRKVAIVITDGQTDKREPVKLDIAVREAHAANIEMYALGIVNSSDPTQAEFLQ
ELNLIASDPDSEHMYLIDDFNTLTALESKLVSQFCEDENGALIYNRVTNGHWNGNNGHGH
GNNGNNGHGEKTDGYNGNGNNGYVFGNNGYWNNGHNFQEEIENQRRTNSRGRGDTFTLPI
SADPLPFQVVEDDEGEDLDLRVHARGSSTVAVVNKSTSLSPVAEASVSNEAVVTSASSST
SSSSSATSTLGSVSSLNQLQPVVSPVQPQVAVPLDPRCNFSLSQGSCRNYSIRWYYDKQA
NACAQFWYGGCGGNDNRFETEDECKKTCVLFRTAA
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgctcccctccgttacctcagtgctgctggtcacagcactgaccagtgtctgggcccaa
gacctttatgacgagaggaaaacaaacaagaaatccagggtcagacctgtggctgcaaac
cttcatgatggacaagccatcctcgatgaggactgtggcttggagctctccttcctgttg
gacagctctgaaagtgccaaggacaatcatgagcaagaaaagcagttttctatgaacgtg
gtggacagactccaaggtttacggctgcaaactggccgcactttgagcttgagggtggca
ttgctgcagtacagcagtcacgttatcacagagcagaccttcagagaatggaggggcaca
gagaacttcaagacaagaataactcccatcatctacatcgggcatggcacctacaccacc
tacgccatcaccaacatgaccaggatctacctggaggaatccagccctggcagcatcaaa
gtagccgtgctgctcacagatggtatttcccacccgaggaaccctgacattttctctgct
gttgctgatgcaaagaaccagggcatcaaattcttcactttgggcatcacccgtgcagcc
aacgagccagccaacgtagcccaactccgtctgcttgccagctctccggcctcacagttc
ctccataacttacaggacgaagacattgttgaaaaaatcgtcactgagattactggtttg
gctgatgaagggtgccctctggctcagagatgctcttgtgagaaaggagagagggggcca
agtgggtctgcggggaaaaaaggacggcctggagatgacggagccccggggcttagaggg
caaaagggtgaagcaggactaagtggtctacccgggcgagagggtagtgagggaaaacca
ggttacaaaggagagaagggtgagaggggtgagtgtggcactccaggaatcaaaggagac
aggggtcttgagggatcagttggcgcaagaggcgttagaggtctacaggggttgccagga
ccacatggggacgttggaccagagggcactcaggggaagcagggtgaacgtggcccacct
ggacctccaggaattcaaggggaaactggtattggacttccaggaccaaaaggtgacatg
ggattccagggtcgggctggtcctcctggtcctcatggagtgggtgaacccggccctcct
ggacctcaaggaccacaaggtgttcaaggggataaaggaccgcaaggcgaaggctttcct
ggaccaaagggggatcgggggcttgctggaccgagggggccaagaggacagcagggtgta
ggaatcaaaggagaaaggggtgaattggggcctccaggtcttccagggccaactggaccg
ataggagtgggcatacagggagagaagggagtcgagggtccaagaggtccaccaggaagc
agaggaattccaggagagggtttacctggacctaagggagaccaaggattaccaggagag
cagggaggtccaggagagagaggcattggtgaacctggttcaaagggagagcctggagca
tctggtgtgagtggcctgcatggtctcccaggagaggatggagctccagggcagaagggt
gagcctggtttacctggttcaagaggccctgagggagcacaaggaattggcactcaaggg
gagaagggtgaccagggtctgaggggcattcgtggattacatgggcctcctgggattgca
ggaccctctgggccaaagggtgaacgtggaataccaggcaatcagggcatgccagggcag
ccaggacggtccatatcaggtccaaagggtgatttaggccctgctggtcctcctggtcat
attggggaaacaggccacggattacccggtccaaagggtgatcgtggtcatccaggtcca
tcaggtccagctggtccaaaaggcgaaggcctcgtcggtcctttgggtcctccaggcctg
ccaggcttaccgggcgagccgggatcagaaggaataggaattcctggtcctaagggtgac
attggctttagaggattgccaggtttgcccggcccacctggagagggtacaaaaggacca
cctggtaatattggaaggcccggacctgctggttcaattggacctccaggacagggtatt
caaggcccaaagggtgagccaggatctcaaggtatgactgggcctagagggcctcaagga
gatggatttccaggagctaagggtgatcgtggattacagggtgagcggggcatgaaaggt
acaaaaggagacttgggagatgctggagtccccggtgaagcggggagaccaggagcgaaa
ggagaacaaggcctcacgagagaagacatcattaagctgatcaaagaaatctgtggatgt
ggcgtcaagtgtaaagaaaggcccatggaacttgtgttcgtcatcgacagctcagagagt
gtcggccctgagaactttgaaatcatcaaggactttgtcaccagattggtggaccggacc
acagtcggacgcaacgccaccagaattggactggtcctgtacagtctggatgtccatttg
gagttcaacttggttcgctacatgaacaaacaagacgtcaagcaggcaatcagaaaaatg
ccttacatgggcgagggcacctacactggcaccgccatcagaaaggcgactcaggaggct
ttcttcagcgctcggcctggagtcagaaaagtagcgatcgtcatcacagacggtcaaact
gacaaacgagagcctgtcaaacttgacatagctgtgagggaagctcatgctgcaaacatt
gagatgtacgccttggggattgtcaattcctccgatcctacacaggccgagttcttgcaa
gaactcaacctcattgcttcagatcccgacagtgaacacatgtacctcattgatgacttc
aatactctaacagcactggagtctaaacttgtcagccagttctgtgaagatgaaaatggc
gcccttatttacaaccgcgtcacaaatggacactggaatggcaacaatgggcatgggcat
ggcaacaacggaaataatgggcacggagagaagactgatggatacaatggcaatggcaat
aatggttatgtttttggaaacaatggatattggaacaacggtcacaatttccaagaggag
attgaaaatcagagacgcaccaacagccgaggccgcggagacactttcacgctgcccatc
agtgctgatcctcttccttttcaggtggtggaagacgatgaaggtgaagatttagactta
cgagtccatgcacggggcagcagtactgtagctgtagtaaacaaatcaacatctttatca
cctgtggcagaagcctccgtgtccaatgaagcagtcgtaacatctgcatcgtcttctaca
tcttcatcctcatctgcaacatcaacactgggctcagtttcatctttgaatcagttgcag
cccgtggtgagtcccgtccagcctcaagtggccgttccacttgatccccgctgtaacttc
agcttgagccaaggcagctgcagaaattatagcatccgctggtattatgacaagcaggcc
aatgcctgtgcgcagttttggtatggaggctgtggtggtaatgacaaccgcttcgaaaca
gaagatgaatgcaagaagacttgtgttttattcagaacagcagcgtaa
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