Larimichthys crocea (large yellow croaker): 104931079
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Entry
104931079 CDS
T04659
Symbol
vars2
Name
(RefSeq) valine--tRNA ligase, mitochondrial
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
104931079 (vars2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lco01007
]
104931079 (vars2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lco03016
]
104931079 (vars2)
Enzymes [BR:
lco01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
104931079 (vars2)
Amino acid related enzymes [BR:
lco01007
]
Aminoacyl-tRNA synthetase
Class I (U)
104931079 (vars2)
Transfer RNA biogenesis [BR:
lco03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
104931079 (vars2)
Prokaryotic type
104931079 (vars2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
Val_tRNA-synt_C
SR-25
tRNA-synt_1e
DUF5630
Motif
Other DBs
NCBI-GeneID:
104931079
NCBI-ProteinID:
XP_019108898
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All DBs
Position
XIII:complement(7722150..7738280)
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AA seq
1076 aa
AA seq
DB search
MLLRMWRAGQLLRLTGRGGRLCSSSSSSSSSSSSSSSQSNSSLRPQKEKQRRRRERDEAI
LSKQPSAAEDEAVTWSEKQKIVYTAQTPAGTKKDTSLPFPSEYSPDYVEASWYQWWEKEG
FFRPEQHETLPHSVDRTFSLCIPPPNVTGTLHIGHALTVAVEDALVRWRRMQGHRVLWVP
GCDHAGIATQAVVERKLLREQGKRRHDFTRQEFLQQVWKWKNEKGDEIYHQLRRLGASLD
WSRACFTMDPDFSRAVTEAFVRLCDSGLIYRSEGLVNWSCALESAISDIEVDSKELSGQT
ALSVPGYENKVEFGTMLTFAYPIDGQDGEVAVSTTRPETMLGDVAIAVHPDDPRYQAVHG
KHCRHPFTHRLLPIITDSLVDMELGTGAVKVTPAHDHTDFLLSQRHSLPRLTVIGGDGTM
THPCGQWLEGVKRFDARQLVVDALVEKKLFRGKKSHAMTLPVCSRSGDIIEPLLKKQWFV
HCEEMAKKAVQAVEDGQLEIIPHFYTKTWKNWLSNISDWCVSRQLWWGHQVPAYQVELPN
PTDRHEERWVWGRSDDEARQRAAVKYGVKPEDVTLTRDPDVLDTWFSSGLFPFAMLGWPK
QTADLQRFYPNSILETGSDLIFFWVARMVMLGTELTGQLPFRQVLLHSLVRDKHGRKMSK
SLGNVIDPLDFIHGVSLERLQEKVKEGNLDPREQLVAMEAQRRDFPKGIPQCGTDALRFA
LCSHRTQGEDISLSVSQVLSCRNFCNKMWQTLRFTLGVLGDNTTPVTTLEETAPLSSMDQ
WICSRLYSTAVQCEEAFEAYELHAVTSALYSFWVHSLCDVYMEYMKPVLLQQDDSGRSRQ
VASSVLYHCVSMSLALLSPFMPFITEELWQRLQPFRPGPAAQTNSLCLQPYPSSSQLAHW
NFPETERDFLLVQEVIRVARSLRAQCGMTKEKPVMWAVCSPSQAQVLLQFGSAVWTLSRI
SNLHLYCPHGADDLLSTHSAPPPPEGSLLGVVDHTCQLHLHVQSGINVDKQILQLSRRRD
KLVPKLEKILCRVRSPDYLTKAPAHVREQIDSKMSALQQELKTVEDQLRVLQETQN
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgaggatgtggcgggcaggtcagctcctgaggctgacaggcagaggaggcaga
ctctgctcctcctcctcctcttcatcttcatcttcatcttcatcttcatctcagtcaaac
tcctctctgcggccccagaaagagaaacagaggcgaagacgagagcgagatgaggccata
ctgtcaaagcaacccagtgctgctgaagacgaagcagtgacctggagcgagaagcagaag
atcgtgtacaccgctcagacacctgctgggacaaagaaagacaccagtttgccgttccca
tccgaatacagtccagattatgtggaggccagctggtatcagtggtgggagaaagaggga
ttcttcagaccagagcaacacgagacgttacctcactctgtggatcggaccttctctctg
tgtattcctcctccaaacgtgacgggaactctgcacataggccacgctctgaccgtcgct
gtggaagacgctctggttcgatggagaaggatgcaaggccacagagtgctgtgggtccct
ggatgtgaccatgcaggtatcgcaacacaggccgtggtggagaggaagctcctgagagaa
caagggaagcgcagacacgacttcaccagacaagagtttctgcagcaggtgtggaaatgg
aagaacgagaaaggagacgagatctaccaccagctgaggaggcttggggcgtctctggat
tggagcagagcgtgtttcacaatggacccagatttcagccgggctgtaactgaggccttc
gtcaggctgtgtgactccggtctgatttatcgctcggagggtttggtcaactggagctgt
gctctggagtctgccatctctgacatagaggtggattcgaaggagctctctggacagaca
gcgttgtctgttcctggttatgaaaacaaagtggagtttggaacgatgctcacctttgcg
tacccgatagatggacaggatggagaggtggcggtgtccaccacccgtcccgagactatg
ctgggagacgtggctatagccgtccaccctgacgatcctcgatatcaggctgttcacggg
aagcactgcagacaccccttcacccacaggctcctgcccatcatcactgattccctggtg
gacatggagctaggaactggcgcagtgaaggtgactcctgctcacgaccacaccgacttc
ctgctgtcacagagacactcgctgccgcgcctcaccgtgatcggaggagacggcaccatg
acgcacccctgtggacaatggctggagggagtgaagcgttttgatgcccggcagcttgtt
gtggacgctctggttgagaagaagctgttcagaggaaagaagagtcacgcaatgacttta
cccgtctgcagtcgctcaggagatatcatcgaacctcttctaaagaagcagtggttcgtc
cactgtgaggaaatggctaaaaaagccgtacaggctgtggaggacggacagctggaaatc
atcccgcacttctacaccaagacatggaagaactggttgtccaacatcagcgattggtgc
gtttccaggcagctttggtggggtcatcaggtccctgcttaccaagtggagcttcctaat
cctactgacagacacgaggagcgttgggtttggggacggagcgatgacgaggcccgacag
agagctgctgtcaaatatggagtgaagccggaagacgtcactttgactcgggaccctgac
gtcctggatacgtggttctcctctgggttgtttcccttcgccatgctcggctggcctaag
cagaccgccgacctccagcgcttctaccccaactccatcctggagacgggcagcgacctg
atattcttctgggttgcaaggatggtgatgctcggtacagagctgacaggacagctgcct
tttagacaggttctactccactctctggtgagagacaaacacggcaggaaaatgagcaaa
tctctgggaaatgtcatcgacccattagatttcatacacggagtctctctggagagactt
caagagaaagtgaaggaggggaaccttgaccccagggagcaactggttgccatggaagca
cagaggagagacttccccaaggggatccctcagtgcgggaccgatgctctgagattcgcc
ctttgctctcacaggacgcagggtgaagacatcagtttgtccgtctctcaggtcctgagc
tgcaggaacttctgtaataaaatgtggcagacgctgagattcacactgggagtgctcggc
gacaacacgacaccagtgacaacactggaagagacagctcctctgagcagcatggaccag
tggatctgctccagactctacagcacagcagtgcagtgtgaggaagcttttgaagcctac
gagctgcacgctgtcacgtctgccctgtactcattctgggtccacagcctgtgtgacgtc
tacatggagtacatgaagcctgtgctgctccagcaggatgacagcggcagatcgaggcag
gtggccagcagtgtcctctatcactgtgtgtcgatgtctctggccctgctctcccctttc
atgcccttcatcactgaggagctgtggcagagactccaaccgttcagacccggacctgct
gcccagaccaacagcctgtgtttacagccgtatccctcctcctctcaactggcacactgg
aatttccctgaaacagagagagacttcttgctagtccaggaagtgatccgagtcgcccgc
tcgctacgagcccagtgcggcatgaccaaagaaaaacctgtcatgtgggcagtgtgttca
cccagccaggctcaagtcctccttcagttcgggtcagctgtttggactttgagccggatc
tccaacctccacctctactgtcctcacggagcagacgacctcctctccacacactccgct
cctcctccacctgaaggaagcctcctcggcgtggtggatcacacctgtcagttacacctt
catgttcagagtgggataaacgtcgacaaacagatcctgcagctctctcggcgcagagac
aagcttgtcccaaagctggagaaaatcctctgcagagtccgatctccggactatctgacc
aaagctcccgctcatgtcagagagcagatagacagcaagatgtcagccctgcagcaggaa
ctgaagaccgttgaggaccagctgagagtccttcaagagacccaaaactga
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