Larimichthys crocea (large yellow croaker): 104931101
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Entry
104931101 CDS
T04659
Symbol
nup98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104931101 (nup98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lco03019
]
104931101 (nup98)
03036 Chromosome and associated proteins [BR:
lco03036
]
104931101 (nup98)
Messenger RNA biogenesis [BR:
lco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104931101 (nup98)
Chromosome and associated proteins [BR:
lco03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
104931101 (nup98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
104931101
NCBI-ProteinID:
XP_027129311
LinkDB
All DBs
Position
XXII:22460103..22479774
Genome browser
AA seq
1845 aa
AA seq
DB search
MFNKSFGTPFGGGTGGFGTSSTFGQQNAGFGAAGGFGTSAFGTTTNAGGLFGATQNKPGG
LFGSSTFSQPATSSTSTGFGFGAASGTSTSLFGNTGAGTTGGLFSQPNNAFGANKPTSFG
KVSLTSCPPGFGTSTSSGGLFGTTNTTANPFGGTTSLFGGGSGFSAAQQPGTTVKFNPPT
GSDTMVKAGVTTSINTKHQCITAMKEYENKSLEELRLEDYQAGRKGPSNPMAAGTASLFG
PATATSSATTGLFGSAAPNTNFSFGQNKSTFGAAPAATGGFGTATGGLFGQQTPQQAASL
FKPFGQATTTQSTGFSFGNTNTMGQANTSSMGLFGNTAASQSGGLFGAAQTSTATGFGTG
TGLFGQTNTGFGNVGTQQSLFGNKTAGFGTTTTSAPSFGTGTGLFGNKPALTLGTGTNTS
TFGFGANPAAGSLFGNKPATGGLGAGLGTSFGTAVGTGQTSLFGNNQNKLGTALGTMGTF
GTAGFNTGTSTLGFGAPQQPVALTDPSAAAAQQAMLQQQLSVLAYSPYGDSPLFRNQLSD
PKKKEERLKPTNPTAQKALTTPTHYKLTPRPATRVRPKALSSSGASKSQLFDGLDDDEPS
LTNGAFIPRKSIKKLVLKNLNSSQYSSPINKETDDLASPSEYPQNGHSHMEDEDELRDMP
GPSSRPDDDPEVTQFYVNPIAKPIPQGRVNTSLQDTINDLNMHKPARNGLELSSEDMSAS
LGEDSLQEDRGEEQQESQQSPHPAGIVLNRVGYYTIPSMEDLADMVDENGECVVENFSVG
RKGYGSIFFHGEVNVTGLNLDEIVHFRRKEVIVYPDDKIKPPEGEGLNRRAEVTLDGVWP
NDKTTCTQIRSPERLTEMNYEGRLEKASRKQGARFLEYRPETGSWVFEVAHFSKYGLQDS
DEEEDVPPKTDPKKLKTMMPPPSRLQQLQQQLPPSQQQVVPQAQSTIVMDLPGGDELDSD
MADITQSILGGEEDVELPAVEMDTFSGKLDGLISAEHDGISASSHIASSLGINPHTLQIM
KASLFAEDEEESDMFQDHGAVKVSTDVSSPRLVLPGAQSRPSVGGLLQARFTSGLFSQLS
DSSRPPPSLSRASPAAVEPSCPLQWAGPSPSSFLLPPRTVEPSIRTVGVRRLGGPVPLKE
SVTHGKGSLMMDAGLFAGRSFRVGWGPGWTLAHCGHRLSSPPGKQFEHQELMAKTDFSFL
PKPARTKPLIESPYKVVLEQLVGLETPSTKSMEEEDEESQAVLQRPLEICLKHSTVNITD
ASTCPLVRPQPGVAALHEYAEWITEVNDKQGEADPVLGYWSEVWTLCEALWGRLGPSDQE
PDMETPDEYKQQLERRRTFSAWLSRGATCRVEEEVALAGKGSHTEAIFSYLTGNRISEAC
RLAQKEGDHRLSLLLSQAMGSQYCRDLLALQLADWNRMQTDSYLPEERLRIFTLLAGKPV
WQSSDSVVNVCSELDWKRCVAVHLWFMLPPTASVADALAKYEAAFQGSCEGGKYACAPLP
PYLDHEQPDMEEEEEQESKRPLHDLCFHLLKLYSDRHYSLQQLLDPLTVTWERLDYRLSW
HLWGVLQALHYSHLSASRQGLLHTSYAAQLESAGLWHMAVFILLHIPDHIQRERAVRELL
TLHCPLQETDESVRRERFLTERLLIPEQWIHEAKATRARRDADRHQEALHLYRAGYWSQC
HRLLIQHLASDCIINDNHDYLLEFLEGLAVPEHSATIQDWDIAGRVYLDYIRVIKTLQDI
QQMENAGYELERLYTDVTSLCSRIELLPCSTARDRLAQSEMAKRVANILRVVLSLQQGDA
ASDSLSIPLTQLAPHITRLPMPEDYTLEELRGLTQSYLRQLIISQ
NT seq
5538 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaagtcatttggtactcccttcggtggaggaacgggagggttcggcacctcg
tcgacctttggacaacaaaatgctggttttggggcggccggaggctttgggacatctgcg
ttcgggaccaccaccaacgctggaggattgtttggtgccacacagaataaacctggagga
ctctttggctcgagtacattcagccagccggcaacttcttcaaccagcaccggcttcggt
tttggtgcagcgagcggcacttcaacgagcctgtttggcaacaccggagcgggcaccacc
ggcggactcttctcgcagccgaacaatgctttcggtgccaacaaacccacttctttcgga
aaagtctccctcacatcgtgtcctccaggctttgggacaagcaccagcagtggcgggctg
tttgggacgaccaacaccaccgctaacccgtttggtggaacaacctccctgtttggaggt
ggctctgggttctctgccgcacagcagccaggaacgaccgtgaaattcaaccctccaaca
ggaagtgacacaatggttaaagcaggcgtgaccacaagcatcaacacgaagcatcagtgc
atcacagccatgaaggagtatgagaacaaatccctggaggagttgaggttggaggactac
caggcgggcaggaagggcccgagcaacccgatggctgcggggacagctagtttgtttgga
ccggcaacggccacatccagtgccaccaccggcctgtttggctctgccgcccccaacacc
aacttctccttcggacagaacaagagcacttttggagcagcaccagcagccactggtggt
tttggtacagccacaggtggtctgttcggtcagcagaccccacaacaagctgccagcctc
ttcaagccgtttggtcaggctaccaccacacagagcacgggcttctccttcggcaacacc
aacactatgggacaggccaacaccagcagcatgggtttgtttgggaacacggcagcatct
cagtcaggtgggttgttcggcgctgctcagacgagcactgctactggctttgggactggc
accgggctgttcggccaaaccaacactggatttggaaacgttggcactcagcagagttta
ttcggtaataagacagccgggttcggcaccacgaccaccagcgcaccgtcctttggaacc
ggcaccggactgtttggaaacaagccagccctcacactggggaccggaactaacacttcc
accttcggatttggtgcgaaccctgctgcagggagtctgtttggtaacaagccagccaca
ggaggactgggagctggacttggaacgagctttggaacagcagtgggcacaggacagacg
tctctgtttgggaataaccagaacaaactaggcaccgcactgggaacaatgggaacgttc
ggaacagccgggttcaacaccggaaccagcaccctgggtttcggagctccacagcagcct
gtcgctctcacagatccgagtgcggcggctgcccagcaggccatgcttcagcagcagctc
agtgtcctggcatactccccgtacggagactcgccactgttcagaaaccagctgtccgac
cccaagaagaaagaggagcgtttaaaaccaaccaatccgacggctcagaaggctctgacc
actcccactcactacaagctcaccccccgacctgcgaccagagtccgccccaaagcgctg
tcatcatcaggagcctccaagtctcagctcttcgacgggctggatgacgacgaaccctcg
ctcactaacggagctttcatacccaggaagagcatcaagaaacttgtgctgaagaacctg
aacagcagtcagtacagcagtcccatcaacaaagagacagacgacctcgcatcgccttca
gagtacccgcagaatggacacagccacatggaggatgaggatgagctgagggatatgccg
ggcccgagcagccggccagacgacgacccggaggtcacacagttctacgtcaaccccatc
gctaagccaatcccacaaggccgcgtcaacaccagcctacaggacaccatcaatgacctc
aacatgcacaaaccggcgagaaatggattagagctgagcagcgaggacatgtcagcgtct
ttgggggaggattctctgcaggaggacagaggggaggagcagcaggagtcccaacagtct
cctcacccagcaggcatcgtcctgaaccgtgttggttactacaccatcccctccatggag
gatctggctgacatggtggatgaaaatggagagtgtgtggtggagaacttctccgttggc
aggaaaggttacggctctatcttcttccatggtgaggtgaacgtgacgggactgaacctt
gacgagatcgtccacttcagacgcaaagaggtcattgtgtacccggatgataaaatcaag
ccacccgagggggaggggcttaacaggcgagctgaggtgactctggacggcgtttggcca
aatgacaagacgacctgcactcagatcaggagcccagagcgcctgacagagatgaactac
gagggtcggctggagaaagcctcacgcaaacagggagctcgtttcctggaatacagacct
gagaccggatcctgggtgttcgaggtggcgcatttctccaaatacggcctccaggactct
gatgaagaagaggacgtcccgcccaaaactgacccgaagaagctgaagacgatgatgcca
cctccctccaggctgcagcagctacagcagcagcttcccccctcccagcagcaggtggtg
ccacaggctcagtccaccattgtcatggatcttccgggtggagacgagttggacagtgac
atggccgacatcacccaaagtatcctgggaggagaggaggacgtcgagctgccagcggtt
gagatggacacgttcagcgggaagcttgacggtttgatctccgccgagcatgatggcatc
tctgcgtccagccacattgcgtcctcgctgggcatcaacccgcacaccctccagatcatg
aaggcgtctctgtttgctgaggatgaggaggagagcgacatgttccaggatcacggagca
gtgaaggtctccactgacgtctcgtcccctcgtcttgtcctgccgggagctcagagccga
ccctctgtcggtggtctccttcaggctcgttttacatccggcctcttctctcagctatca
gactcttcccgccctcctccttcactgtctcgggcgtctccagcagccgtcgaaccgtcc
tgtccattacagtgggcggggccgtccccctcgtccttcctgctgccccccagaactgtc
gagccttcgatcaggacggtcggtgtacggcggctgggtggccccgtccccctgaaagag
tctgtcactcatggaaaggggagtttaatgatggacgcggggctgtttgcgggtcgttct
tttcgggtcggctggggtcccggttggacgttggcacactgcggccaccggctgagctca
ccgccaggaaaacagttcgagcaccaagaactgatggctaaaacagacttcagcttcctg
ccaaagcccgccaggaccaaaccgctgatcgaaagcccctataaggtggtgctggagcag
ctggtgggtctggagactccatcaacgaagagcatggaggaggaggatgaggaaagccag
gcggtgctgcagcgccccctggagatctgtctgaagcacagcacggtcaacatcacagat
gcctccacctgccctttggtccgaccacagcccggtgtggcggccctgcacgaatatgcc
gagtggatcaccgaagtgaacgataagcagggagaggcagaccctgtcttgggttactgg
tctgaggtctggaccttgtgtgaggccttgtggggccggttgggcccctcagatcaagag
ccagacatggagacgcctgacgagtacaagcagcagctggagaggaggaggaccttctcg
gcctggttgtctcgtggagccacctgcagggtggaggaggaggtagccctggcagggaag
ggtagccacacggaggccatcttcagctacctgacaggaaaccgcatcagtgaggcatgt
cgactcgcacagaaagaaggagaccaccgtctgtccttgctgctgtcacaggccatgggc
tctcagtactgccgggacctgctggcccttcagctcgcagactggaaccgcatgcagacc
gactcctacttgcccgaggagcgacttcgtatcttcacgcttctcgctggcaaacctgtg
tggcagtcgtctgactctgtggtgaacgtgtgctccgagttggactggaagcgctgcgtg
gcggtccacctctggttcatgttgcctccgactgcctcggtggccgacgcccttgccaaa
tatgaggccgccttccagggttcatgtgaggggggcaagtacgcctgcgcccccctgcct
ccttacctggatcatgagcagccagacatggaggaggaggaggagcaggagtctaaacgg
ccactacacgacctctgcttccacctgctcaaactctacagcgacagacattacagcctg
cagcagctgttggaccctctgaccgtcacctgggagcgtctggactatcgtctgagctgg
cacctgtggggagtcctacaggcactacactacagccacctgagcgcctcacgccaggga
ctcctccacaccagctacgcggcacagctagagagcgccggcctttggcacatggctgtc
ttcatcctgctgcacatccccgaccacattcagcgggagcgagcggtcagggagctgctg
accctccactgccccctgcaggagacagacgagtcggtccggagggagcgcttcttgacc
gagaggctgcttatcccggagcagtggattcatgaggccaaggccacccgagcccgccgt
gatgctgacagacaccaggaggccctgcacctgtaccgggctggatactggagccagtgt
caccgactgctgatccaacacctggcctcagactgcatcattaacgacaaccacgactac
ctgctggagttcctggaggggctggcggtccctgaacacagtgccaccatccaggactgg
gacatagcagggagggtttacctagactacatcagagtcatcaagactctgcaggacatc
cagcagatggaaaatgctggttacgagctggagcgtctctacactgatgttacatctctc
tgcagtcgaattgagcttctgccctgcagtactgccagagaccgcctcgcccaatcagaa
atggcaaagcgtgttgccaacatcctgcgcgtggtgctgagcctgcagcagggtgacgca
gcgtctgactccctcagcatcccgctcacccagctggcaccgcatattacccgcctaccg
atgccggaggactacacgctggaggagctgagaggccttacgcagtcatacctacgacag
ctcatcatcagccaatga
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