Larimichthys crocea (large yellow croaker): 104931249
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Entry
104931249 CDS
T04659
Symbol
usp19
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 19 isoform X3
KO
K11847
ubiquitin carboxyl-terminal hydrolase 19 [EC:
3.4.19.12
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lco01002
]
104931249 (usp19)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lco04121
]
104931249 (usp19)
Enzymes [BR:
lco01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104931249 (usp19)
Peptidases and inhibitors [BR:
lco01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
104931249 (usp19)
Ubiquitin system [BR:
lco04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
104931249 (usp19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
USP19_linker
UCH_1
zf-MYND
CS
MYND_ZMYND11_ZMYD8
USP7_C2
ISP3_C
Motif
Other DBs
NCBI-GeneID:
104931249
NCBI-ProteinID:
XP_010744509
LinkDB
All DBs
Position
XV:complement(5144148..5165897)
Genome browser
AA seq
1523 aa
AA seq
DB search
MASSGGGGGGETVGRRGGAQQRGGGGGGGGGGGDGRDNSSELSSSTSKKKQKDRANQESR
EAKRAAAAVDGVIAEVKKDVFVDWKQNVNEVTVRLRCGEGVQRIEDINTTFTDTHCHVCF
PDGRQWSCQLQEEIEASCSRVQYKEKGGFLHVIMQKKIPFHIWPSLKSNKKEKEAAPPET
KYVKELALDSSEKSKPSSSQPHLQPQPPSSPAPGESKRSGGKGERGAKRCLKNKAACDKA
ATDSVGGKGGAGDGSATTGKPATVTTGEQQPQEPSAKRTIVRPPKTTKEAASPADRGAHT
VKSTVANGKAQHTHEPAGRSPQTQRRDGDNRAERLSSDQEHKTAASHTNKTQVAEKRSQS
SDGSGATAHGSDSQPAAPVGTSDCFDNEAHSASLETVGDRTDSEPEKKPVEQESEQDTLT
RQQLESRETGPIPAAGVPAKRGESPGLSPRRGSCDGEEKRDQSKEEPPLELKQQEAPEPM
VNLQFVKNDSYEKGTDLMVVNVYMKGICRDTARVIFREQDFTLIFQTSDTNFLRLHSDCG
PNTVFKWQVKLRNLIQPEQCSYSFTPSRLDITLKKRHSQRWGGLEAPATQGAVGGAKVAV
PSSPGCMEKSQPGSSQHSLPAKEEPPRVGEEKPKAPKASSRVEDGGLDTVAPRTVSEHVT
ITKTEPAVTTPKPTCMVQPMTHAPPASNERHEEEEEKKVCLPGFTGLVNLGNTCFMNSVI
QSLSNTRELRDYFHDRAFEAEINCNNPLGTGGRLAIGFAVLLRALWKGTHHAFQPSKLKA
IVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTETVDSDGRLDEVVAEEAWQ
RHKMRNDSFIVDLFQGQFKSKLVCPTCSKVSITFDPFLYLPVPLPQKQKVLSVFYFAKEP
HKKPIKFLVSVSKENSSTAEVLESISRSVRIKAENLRLAEVGKNRFQRMFLPSHSLDTVS
SSDMLFCFEVLSKDMAKERVVLLRVQQRLQVPNIPISKCAACMKPPGSEEDKLKRCTRCY
RVGYCNQACQRTHWPNHKGLCRPNTESVGLPFLVSVPESRLSYSRLTQLLEGYSRFSVNV
FQPPFQSGRTSPETSQCRADLPPVPAGSPDVPKDEAMGGSGTVGAADVEPESPSLLPESQ
ADCAQASAPHSGESDSLSSSQTSLSTTRTTDSGFSEPVSSMSCSLDPHAEKETSCEKAVR
PEAAVTGYQHPSESASGHGSQFYIALLDSDNKEQRLDEREDLLADLPEDATLELVWKNKE
RLKEYVLVSSKELEYEEDPGSLSETARAGHFTLEQCLNLFTKPEVLAPEEAWYCPKCQQH
REASKQLLLWRLPNVLIIQLKRFSFRSFIWRDKINDMVDFPVRNLDLSNFCIGQKDEMQQ
PPIYDLYAVINHYGGMIGGHYTAYARLPSDKNSQRSDVGWRLFDDSTVTMVEESQVVTRY
AYVLFYRRRNSPVERPPRFLRPVGAESPTAAGATASQASSQSLFGTDLDPEGPPTLTPEV
PSDLFAHSGECTEPSYSNMEEVD
NT seq
4572 nt
NT seq
+upstream
nt +downstream
nt
atggccagcagcggcggcggaggaggtggtgagacggtgggccgtcgtggcggggctcag
cagagaggaggaggtggtggtggaggcggcggtggcggtgacggacgggacaacagctca
gagctgtcgtccagtaccagcaagaagaagcagaaggacagggccaaccaggagagcaga
gaggccaagagggcagctgcagcagtagatggggttatagcagaggtcaagaaagatgtg
tttgtggactggaagcagaatgtcaatgaagtgactgtcaggctgcgctgtggggagggc
gtgcagaggatagaggatatcaacacaaccttcactgacacacactgccacgtgtgcttc
cccgatggacggcagtggagctgccaactgcaggaggaaattgaggcctcatgtagcaga
gttcagtacaaggagaagggaggattcctgcacgtcatcatgcagaagaagattcccttt
cacatctggccttcgcttaagtcaaacaagaaggagaaggaggcagcacccccagagacc
aaatatgtcaaggagctggccttggattcttcggagaaatccaaaccgtcctcctcgcag
ccacacctgcaaccccagcctccctcctcacctgcgcccggcgagtcaaagcgcagcggg
ggcaaaggcgagcgtggcgccaagcgctgcctgaaaaacaaagcggcatgcgacaaggcc
gcaacagactctgtaggggggaaaggtggagctggagacggctcagccaccacaggcaag
cccgctaccgtcacgacaggcgaacagcagcctcaggaacccagtgccaagcgcaccatc
gtacggccgcccaagaccaccaaggaggccgcctcaccagccgacaggggcgcgcacact
gtcaagtccacagtagccaatggtaaagctcaacacacacatgagcccgctggtcggagc
ccacagacacaacgcagagatggagacaaccgagcagagagactcagcagtgaccaggaa
cataaaactgctgccagccataccaacaaaactcaggtggcagagaagcgaagccagtcg
tcagacggatccggagcaacagcacatggcagcgacagccaaccagcagctcccgtcggc
accagtgactgcttcgacaatgaggcgcactccgcttcactggaaactgtgggagacaga
actgactctgagccagagaaaaagcctgttgagcaggaatcagagcaggatactctgacc
cgccagcagcttgaatcaagagagacaggtccaataccagctgctggagtgcctgccaaa
cgaggcgagtcacctggactatcgccgaggcggggcagctgtgacggagaggagaagcgg
gaccagtcgaaggaggagcctcctctggagttaaagcaacaggaagccccggagccgatg
gttaacctgcagtttgtgaagaacgattcatacgagaagggcacggacctgatggtggtt
aatgtttacatgaaggggatctgcagggacacggccagggtcatcttcagggaacaggac
ttcaccctcatcttccagacaagcgataccaactttctgcggcttcattcagactgcggg
ccgaacacggtcttcaagtggcaagtcaaactcaggaacctgatccagcctgagcagtgc
agctactccttcaccccgtcccggctggacatcaccctgaagaagaggcacagccagcgc
tgggggggtctggaggcccctgccacacaaggtgcagtgggtggcgccaaagttgctgtg
ccctccagccctggttgcatggagaagagccagccaggaagcagccagcacagcctgcca
gccaaggaggagcctccgagggtcggggaggagaaacccaaggcccctaaggcttcatcc
agggtggaggatggcggtctggatactgtggctcctcgcaccgtctctgagcatgtcacc
atcaccaagacggagcccgctgtcaccacgcctaaaccgacctgcatggtgcagcccatg
acccacgcacctcctgccagcaatgagcggcacgaagaagaggaggagaagaaggtgtgc
ctgcctggttttacaggattggtcaacctcggcaacacctgctttatgaacagtgtcatc
caatccctgtccaacaccagagaactcagggattacttccacgatcgagcatttgaggca
gaaatcaactgcaataatccgctgggaacaggaggcaggctggccattggctttgccgtg
ctgctcagggccctttggaaaggaacacaccacgccttccaaccctcgaaactcaaggcg
attgtggccagtaaagccagtcagtttacaggttacgcccagcacgatgcccaggagttc
atggctttcttgctggatgggctccacgaggacttgaaccgcatccagaataaaccgtac
acagagacggtcgactctgacggacggctggatgaggtggtggcggaggaggcgtggcag
aggcacaagatgagaaatgactccttcatagtggacctcttccaaggccagttcaaatcc
aagcttgtctgtcccacatgctccaaggtgtccatcacctttgacccattcctctacctg
cctgtgcccctgccccagaaacaaaaggtgctctcagttttctactttgcgaaggaacct
cataaaaaacccatcaagtttttggtgagcgtgagcaaggagaactccagcactgctgaa
gtcctcgaatccatctccaggagtgtcaggatcaaagcagagaacctcagactggcagag
gtggggaagaaccgcttccagcgcatgttccttccgtctcattccctggacacagtgtcc
tcctcagacatgctgttctgctttgaggtgctttccaaagacatggccaaagagagagtg
gtactgctcagagtgcagcagagactgcaggtccctaacatccccatctcaaagtgtgct
gcctgcatgaagcctcccgggtccgaggaagacaagttgaagcggtgcactcgctgctat
cgcgtcggctactgcaatcaagcgtgtcagaggacccactggcccaatcacaaaggtctg
tgtcgacccaacacagagagtgtgggcctccctttcttggtcagcgtgccggagtctcga
ctctcatattcccgcctcacccagctactagagggttactccaggttttccgtcaacgtg
ttccagcctcctttccagtcaggcaggacgtcccccgaaacatcccagtgccgggctgac
ctccccccagtgccggcaggctcacctgatgtgcccaaggatgaggccatgggtggtagt
ggtactgtaggagcagctgatgtggagccagagagcccctctctgctgcctgaatcccag
gcagactgcgctcaggcctcagccccccactctggagagtccgattccctctcctcctcc
cagacctcactctccaccacacggactacagattcaggattctctgagccagtctcctcc
atgtcctgctctctggatcctcatgctgaaaaagagacatcgtgtgagaaggcagtgcgg
ccagaggctgcagtaacaggctatcagcatccaagtgagtcagcatcaggtcatggcagt
cagttctatatagctctgctggactctgacaacaaggagcagaggctggacgagagagag
gacctgctcgccgacctccctgaggatgcgaccctggagctggtgtggaaaaacaaagag
cgtctgaaggagtacgtgctggtgagctccaaggagctggagtatgaggaggaccccggc
tccctgagcgagacggccagagcgggacacttcaccctggagcagtgcctcaacctcttc
acaaagccagaggtgctggcaccagaagaggcatggtactgtccaaagtgccagcaacac
cgagaggcctcaaaacaactgctgctgtggcggctgcccaacgttttgatcatccagctc
aaacgcttctccttcaggagtttcatctggagggataagatcaacgacatggttgatttc
cccgtcaggaatctggatctgagtaatttctgtatcggccagaaggacgagatgcaacaa
ccccccatctatgacttgtatgcagtcatcaaccactatggaggaatgataggaggccac
tacacggcctacgctcgcctgccgagtgacaagaacagccagcgcagcgatgttggctgg
cgtctgtttgatgacagcaccgtgacaatggtggaggagagtcaggtggtgacgcgctac
gcctacgtcctgttctaccgacgacgaaactcccccgtggagaggccaccgcgcttcctc
aggcccgtaggagcagagtcgcccaccgctgcaggagctactgccagccaggcctctagc
cagtcactattcgggacagacctggatcctgaaggaccacccacactgaccccagaggtt
ccctctgacctcttcgcccactctggggagtgcacagagccatcctacagcaacatggag
gaggtggactag
DBGET
integrated database retrieval system
