Larimichthys crocea (large yellow croaker): 104931255
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Entry
104931255 CDS
T04659
Symbol
ndc1
Name
(RefSeq) nucleoporin NDC1 isoform X1
KO
K14315
nucleoporin NDC1
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104931255 (ndc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lco03019
]
104931255 (ndc1)
Messenger RNA biogenesis [BR:
lco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104931255 (ndc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
104931255
NCBI-ProteinID:
XP_027144646
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All DBs
Position
II:7027914..7035524
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AA seq
678 aa
AA seq
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MSAHDGMFSAEQSCWFVRKVICWRAAASVAWAVLLLPPITAAFVILSRFSLLHPIQTISE
CLSLLTSASAVFSLILLCGVILVVGFLNLEYYTVIPTIACSKIALLGQLLHPRQLLNSLV
HSIMGMIVAWCCAITIGGRYETLGYPCPQSDGSDGSPQMCLNEYHLALLLAGAFVGFSHS
LLGVIHNMNYVSFHTVQQYKYLRFKGSLPLVVKCSATQALYSIRNYIVVYFFLGYIPKAW
LCKTLNLDSNSSVHPLDSIAGLLDLTLLYHMWISASFLLFTWHITLLLFRIFVTEVYSFP
VQSSFTEDAHQCLSKVLADKQPMILKFLALQDLALLSQHSPSRRGEVFSLSQPGGHPHNW
NAISRECLSLLTDLTQRLVIYHDTVATNGRAKSLSTGSERKSSSETSVTSGTDDLMSPRP
AFLLKTPASVFARSVVGSPKSPLTAPFTPDLDSPFASPALRRLTAPVEQCSPWFGTVQSP
HVMRRVPKLWSASTDSQINGSPQSSPASVPSPKQEASKPSLLAQFLQNRKEQVKNFLAKR
VLIMYLFNKLPEASSQALFADSQAHIWALEGLSYLVQASFSEDQFGVVQTTLPSILSSML
VLQEAVDRHFKLPHASSKPVRSSGSMGDSTHKTLRFALRATLKTAIYRITTTFGDHLKAI
QMSAEHRKRLQQFLEYKE
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcacacgacggcatgttctctgcagagcagagctgctggtttgtccgcaaggtg
atctgctggagagctgcggccagcgttgcttgggccgtcctgttgttgccgcccatcacg
gcggcgttcgtgatcctcagcaggttcagtctcctccaccccatccagacgatatcggaa
tgcctgtccctcctgacgagcgcgagtgccgtcttctcgttaatcctgctgtgcggagtg
atcctcgtggtcgggttcctgaacctggagtattacacggtcatcccgactattgcatgc
tcaaaaatcgccctgctgggtcagctgctccaccctcgtcagcttctcaactccctggtc
cacagcatcatggggatgatcgtggcttggtgctgtgccatcaccatcgggggaagatac
gagacactgggctacccttgcccacagagtgacggcagcgacggctcgcctcagatgtgt
ctgaatgagtatcacctcgcccttctgctggccggagcctttgttggattctctcacagc
ctgctgggcgtgatccacaacatgaactacgtctctttccacactgttcagcaatacaaa
tacctccgctttaaggggtccctacctttggtggtgaagtgcagcgccactcaagctctt
tactccatcaggaactacatcgtcgtgtatttctttctgggctacatcccaaaagcgtgg
ctctgtaaaacgctgaatctggattcgaacagctctgtccaccctcttgacagcatagcc
ggactgctggacctcaccctgctctaccacatgtggatcagcgccagcttcctcctcttc
acgtggcacatcacgctgctgctctttaggatctttgtcacagaggtgtacagttttcct
gtgcagtcatcttttactgaggatgcccaccagtgtctctctaaagttcttgcagacaag
cagccgatgatattgaagtttctagctctgcaggacttggctctgctgtctcaacactcc
ccatcacggcgcggtgaggtgttcagtctaagtcaaccaggcggccatcctcacaactgg
aacgccatcagcagggagtgtctgtctctgctgaccgatctgacccagaggctcgtcatc
tatcacgacaccgtggcaaccaacggcagggccaaatcgctgtctaccgggagcgagcgg
aagagttcatccgagacgtcagtaacctcaggcacggacgacctgatgagcccgagaccc
gcgtttctgttgaagactccggcttcggtcttcgcacgctccgtcgtcggcagcccaaag
agccctctgacggcaccgttcacccccgacctggacagcccctttgcttctcccgccctg
cgccgcctcaccgctcctgtggaacaatgctcgccgtggttcggcacggtgcagagccca
cacgtcatgaggagagtgccaaaactctggtccgcctccacagattcacagatcaacggc
agtccccagtcctccccggcctcggttcccagtcccaagcaagaagcatccaaaccaagt
ctcctggctcagttcctccagaaccggaaagaacaggttaaaaatttcttggcaaagcgg
gtgctgataatgtatttgtttaacaagcttccagaagcctccagccaagctctgttcgca
gacagccaggctcacatctgggctttagaaggactgtcttacctcgttcaagcctccttc
tcagaagaccagtttggagtagtacagaccacgttacccagcattctcagctccatgctg
gtcttacaagaggcagtcgatcgacacttcaagctgcctcacgcctccagtaaacccgtc
aggtcgagcggcagcatgggagactccacgcacaagacgctgcgcttcgccctcagggcc
acgctcaagaccgccatctacaggataacgacgactttcggagatcacttaaaagctatc
cagatgtccgcagagcaccggaagagattgcagcagtttctggagtacaaggagtaa
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