Larimichthys crocea (large yellow croaker): 104931308
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Entry
104931308 CDS
T04659
Name
(RefSeq) CLIP-associating protein 1-like isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lco03036
]
104931308
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lco04812
]
104931308
Chromosome and associated proteins [BR:
lco03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
104931308
Cytoskeleton proteins [BR:
lco04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
104931308
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
CEP104-like_TOG
HEAT
HEAT_EF3_N
HEAT_EZ
Cnd1
HEAT_2
Adaptin_N
TOR1L1_N
RTP1_C1
HEAT_DAAF5
Paxt-1_C
MMS19_C
KH_DEAH11_1st
Motif
Other DBs
NCBI-GeneID:
104931308
NCBI-ProteinID:
XP_027147188
LinkDB
All DBs
Position
XIX:10833959..10865600
Genome browser
AA seq
1617 aa
AA seq
DB search
MEEEVSMEYVVEQVMQKDLGKRLQVGQEIIDHILDEEKSVELEQDQSMLDRMVDAVASSW
VNSSNFKVVLLGMDILSALVSRLQERFRTQVGTVLPSLIDRLGDSKDQVRDQDQALLLKI
MDQAANPQYVWERMMGGFKHKNNRTREGLCLCLISTLNVFGSQSLTLSKIVPHICNLLGD
PTSQVRDGAMNCLVEIYRHVGERVRMDLGKKGLPQSRLNVIFSKFDEVQRSGNMVLSPVS
DKNFEDDDSVDGGRSSSSSKGASLSGKKTVSMGSFRRPASASSAKSAGRDGSGSAAGAVD
EEDFIQAFEDVPTMQIYSNREVEEAMTKIRDVLSDDKKDWELRVAALKRVRSLLLAGAAE
FDGFLQQLRLMEAAFKLSAKDLRSQVVREACITLGHLSSVLGSRFDHAAEATMPILLNLV
PNSAKVMATSGMAAIRLILRHTHYPRLIPIITSNCASKSVAVRRRCFEFLDLLLQEWQTS
SLERHGTVLMETIKKGIHDADAEARSVARKCYWSFHGHFRREAEQLFQGLESSYQKALQA
HLRSGDSLMSLPASDRSSSSSQESLNRPVPVKNTFASGTGRSKAAHSRTPAAASSPGSLQ
RSRSDVDVNAAATATARTRMPAVPSAASAAASPFSSASALPPGSYASLGRVRTRRTSSGN
SPSVTDSRGRSRGKVVSQSQPGSRSGSPGRLLSSTYGRIPRPAMGTAAAAATTNSASTGV
TDKNRPRGHRSQGCSRETSPTRSGTARSRIPRPSMSQGCSRETSRESSRDTSPARGFSPL
ATRRHSRSTSALSSAECYSDRLSHQARISASVNAMRILNTGTDVEAAVADALLLGDSRSK
RRPVRRRFESPGMYSDDDANSDASSACSERSYSSRNGGMAPHYLRQTEDVAEVLNHCASA
NWSERKEGLLGLQNLFKSQRMLSRVELKRLCEIFTRMFADPHSKVFSMFLETLVDFITLH
RDDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDITRESFPYEQQFNILMRFIVDQTQ
TPNLKVKVAILRYIEALARQMDPADFVNSSETRLAVSRIITWTTEPKSSDVRKTLHNWAG
EDFSGRPSTVASLPGEGNLEERCKQAAQVVLIALFELNTPEFTMLLGALPKTFQDGTTKL
LHNHLRNASAGICMASPSNSAGRTLPRQPGSRSSPLTSPTNCSHGGLSPSRLWGWSADGL
SKFPPPSFPSPLSPSAAHSSLKAVRRAYSPSMLEYDSENLNSEEIYSSLRGVTEAIQNFS
FRSQEDLMEPLRRDSKRDGMSGVGASSDGDVVGGGRTALDNKTSLLNTPSPRSFAGPRFR
DYNPYNYTDSISTLDKAALKEALYEDAVEQLRDGCRQEYVENKIMNPKSFPAAPAEQLEL
VGGLLKELSQGQAGERGPEERRGTLLELLKVAREDSLVVWEEHFKTMLLLLLETLGDKDH
TIRALALRVLKEILRNQPARFKNYAELTIMKTLEAHKDSHKEVVRAAEEAASTLAGSIHP
EQCIKVLCPIVQTADYPINLAAIKMQTRAIERISKEPLHQLLSDITPGLLQGYDNTESSV
RKASVFCLVAIYSVIGEELKPHLAQLTGSKMKLLNLYIKRAQTSTSNSSSSSDISSY
NT seq
4854 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggaggtgagcatggagtatgtggtggagcaggtgatgcagaaggacctgggg
aagaggctccaggtgggccaggagatcatagaccatatcctggacgaggagaagtccgtg
gagctggagcaggaccagagcatgttggacaggatggtggacgcggtggccagctcctgg
gtcaactccagcaacttcaaggtggttctgttggggatggacatcctgtcagctctggtc
agccgactgcaggagaggttcaggacgcaggtgggaacagttctgcccagcctgatagat
cggttaggagactccaaggaccaagttcgagaccaggaccaagcgcttctactgaagatt
atggaccaggccgccaacccacagtatgtgtgggagcgaatgatgggaggcttcaagcac
aagaacaacaggaccagagaaggactctgcctttgtctcatctcaaccctcaatgtgttt
ggatctcagagtctgacgctcagtaaaatcgttcctcacatctgtaacctgctcggagat
cccacgagtcaggtgcgtgatggagccatgaactgcctcgtcgagatctaccgccacgtt
ggagaacgagtgaggatggacctgggaaagaaaggtctgccgcagtcacggttgaacgtc
atcttcagtaaatttgacgaagttcaaaggtcagggaacatggtcctgtcacctgtgtca
gacaaaaactttgaggacgatgactcggtggacggcggccgctcctcgtcctcgtccaaa
ggagcctcactgtccgggaagaagaccgtgagcatgggttcatttcgacgtcccgcctcc
gcctccagcgccaagtctgcagggagggatgggtctgggtctgctgctggagcggtggat
gaggaggacttcattcaggcctttgaggatgtgcccacaatgcagatctactctaacagg
gaggtggaggaggccatgacgaagattcgagacgtgctgtcggatgataagaaggactgg
gagctcagagtggcagctctgaagagggttcgttcgctgctcctggccggcgcagcagag
ttcgatggattcctgcagcagctgaggctcatggaagctgcgttcaaactatccgccaag
gacctccggtctcaggtggtgagagaggcctgcatcactctgggtcacctgtcgtcggtg
ctcggcagccgcttcgaccacgcggcagaggccaccatgccgatcctcctcaacttggtc
cccaacagtgccaaagtcatggccacctccggcatggccgccatccgcctcatcctcaga
cacacacactaccctcgtctcatccccatcatcaccagcaactgtgcctccaaatctgtg
gctgtcagaagacgctgctttgagtttttggacctgctgctgcaggagtggcagacgagt
tctctggagagacatggaacagttttaatggagactataaagaaggggatccatgacgca
gacgcagaggctcgctctgtggccaggaagtgttactggagcttccacggtcacttccgt
cgcgaggcagagcagttgttccagggcctggagtcgtcctatcagaaagctctgcaggct
cacctgaggagcggagacagcctgatgtcgctgcccgcctcagatcgctcctcctcgtcc
tcccaggagagcctcaatcgacccgtccctgtaaaaaacacctttgcaagcggcacagga
agatccaaagctgcccacagcaggacgcccgctgccgcttcctctccaggctctctgcag
cgttctcgtagcgacgtggacgtcaacgcggcggccacagccaccgcccgcaccagaatg
cccgccgtgccctctgctgcgtcagcggcggcttcgcccttcagctcagcctcggccctt
ccacctggatcctacgcctcactgggtcgagtacgaaccaggaggacgagttcaggaaac
agtccgtctgtgactgacagccggggaagaagccgagggaaagtcgtctctcagtctcaa
cccggcagcaggtcaggctctcctggccgactcctgagctccacctacggcaggatcccg
aggccggctatgggcactgctgctgctgcagccacaaccaacagcgcctccaccggtgtg
actgacaagaaccgacctcgtggtcaccgcagccagggctgcagccgagagaccagcccc
accagatcaggcacggcccgcagtcgaatcccccgaccaagcatgagtcagggctgcagc
cgcgaaaccagtcgcgagagcagccgcgacaccagccccgccaggggtttctcccccctg
gctactcgtcgacactcccgctctaccagtgccctgtcctctgcagagtgctactcagac
cggctgtcccatcaggctcgtatctcggcctctgtcaacgccatgagaatcctcaacacc
ggcaccgatgtcgaggctgccgtcgccgacgctctgctcttaggagactcgaggagtaag
cggaggccagtgaggcggcgcttcgagtctccgggaatgtattccgacgacgacgccaac
agcgacgcctccagcgcctgctctgagcgctcgtacagctcacgtaacggcggcatggcg
ccccactacctgcgtcagacggaggacgtggccgaagtgctgaaccactgcgccagcgcc
aactggtctgagaggaaggaggggctgctgggactgcagaacctgttcaagagccagagg
atgctcagtcgtgtggagctgaagaggctttgtgagatcttcaccaggatgtttgcagac
cctcacagcaaggtcttcagcatgttcctggagactctggtggacttcatcacgctgcac
agggacgacctgcaggactggctcttcgtcctgctcactcagctgctgaagaagatgggg
gccgacctgctgggctccgtccaggccaaagtccagaaggcactggacatcaccagagag
tccttcccgtacgagcagcagttcaacatcctgatgcgtttcatcgtggatcagacgcag
acgcccaacctgaaggtgaaggtggccatcctgcgctacatcgaggcgctggcccgacag
atggacccggctgacttcgtcaactccagcgagacgcgcctcgccgtctcgcgcatcatc
acctggaccaccgagcccaagagctccgacgtccgcaagacccttcataactgggcaggg
gaggatttctcaggccgacccagcaccgtggcttctctgcctggagaaggcaacctggag
gagaggtgcaagcaggcggctcaggtggtgttaatcgccctcttcgagctcaacactcca
gagttcaccatgctgctgggcgcgctgcccaaaaccttccaggacggaaccaccaagctg
ctgcacaaccacctgaggaacgccagcgctggcatctgcatggcgtctcccagtaactcg
gcaggtcggacgcttccacggcagcccggcagccgcagcagcccgctcacctcacccacc
aactgctcccacggggggctttctcccagtcggctgtggggttggagcgcagacgggctc
tccaagttccctcctccatccttcccctcccctctttctccatccgctgcccactcctcg
ctcaaggcagtgcggcgagcttactcacccagcatgctggagtacgacagtgaaaacctg
aactcagaggagatctacagctctctccggggcgtcactgaagccatccagaacttcagc
ttccgcagccaagaagacctgatggagccgctgaggcgagacagcaagagggacggcatg
tctggagtcggagcgtcctcagatggtgacgtggtgggcggaggacgcacagctctggac
aacaagacgtcgctgctgaacacgccttcgccacgttccttcgccggcccgcgcttccgt
gactacaacccgtacaactacaccgacagcatcagcacgctggacaaagctgctctgaag
gaggcgctgtacgaggacgccgtggagcagctgagagacggctgtcgacaagaatatgtg
gagaacaagatcatgaaccccaaaagcttcccagcggcccccgcagagcagctggagctg
gtcggggggctcctgaaggagctctcacagggccaggcaggggagcggggccccgaggag
agacggggaaccctgctggagcttctgaaggtggcccgagaagacagcctggtggtgtgg
gaggaacacttcaagaccatgttgctgctgctgctcgagacgctgggagacaaagaccac
acgatccgggcgctggccctgcgagtcctgaaggagatcctgaggaaccagccggcccgc
ttcaagaactacgcagagcttaccatcatgaagacgctggaggctcacaaagactcgcac
aaggaggtggtgcgtgcggcggaggaggcggcctccacgctggcaggctccatccacccg
gagcagtgcatcaaggtcctctgtcccatcgtgcagacggcagactaccccatcaacctg
gccgccatcaagatgcagacgagggccatcgaacgcatctccaaggagccgctccaccag
ctgctgtctgacatcacacctgggctcctgcagggctacgacaacactgagagcagcgtg
cggaaggccagcgtcttctgcctggtggccatctactctgtgatcggagaggagctgaag
cctcacctggctcagctgaccggcagcaagatgaagctgctcaacctgtacatcaagaga
gcccagacctccaccagcaacagcagcagctcctccgacatctcctcctactaa
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