Larimichthys crocea (large yellow croaker): 104931346
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Entry
104931346 CDS
T04659
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-2 isoform X1
KO
K04859
voltage-dependent calcium channel alpha-2/delta-2
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04010
MAPK signaling pathway
lco04260
Cardiac muscle contraction
lco04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
104931346
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
104931346
04261 Adrenergic signaling in cardiomyocytes
104931346
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lco04040
]
104931346
Ion channels [BR:
lco04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
104931346
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
VWA_2
dCache_1
MCP-like_PDC_1
VWA_CoxE
CENP-F_leu_zip
dCache_2
Motif
Other DBs
NCBI-GeneID:
104931346
NCBI-ProteinID:
XP_019118065
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Position
VI:10901339..10942989
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AA seq
1096 aa
AA seq
DB search
MAIGKRSCSIVCLVSIQIILIFSASWPGAAALTFPQQYTIMHWARRIEQEIDRVFQHITG
AQQLKGIYNEERRQFSLVRNQPRKIVEKVASDIEKLLAKKRKALDRLASEAERLQREHPW
QDGIKELDMAYYDSKAELDYYSMDGEGEVENPSHIKLEFVYDPNFKNNVNYSYTAVQIPT
DIYKGAPVILNELNWTQALEKVFMENSQEDPSLLWQAFGSATGVTRYYPATPWKAPDKID
LYDVRRRPWYIQGASSPKDMVILVDVSGSVSGLTLKLIKASVMEMLDTLSDDDYVNVARF
NEKAEAVVPCFKHLVQANVRNKKIFKDAVQQMQAKGTTDYKSGFHFAFNQLLNKTNVPRA
NCNKIIMLFTDGGEDRAQDVFMQYNWPNKTVRVFTFSVGQHNYDVTPLQWIACTNKGYYF
EIRSICAIRINTQEYLDVLGRPMVLAGSDAKQVQWTNVYQDALGLGMVVTGTLPVFNLTM
DGNSQNQLILGVMGVDVHLDEIKRLTPRYNLGANGYIFAIDPNGYLLLHPNLQPKLVNLP
EPVTLDFLDAEVEDSNKEEIRRQMIDGRPGEMQIKTLIKSIDEQYIDEVYRGYTWTPING
TDYSLGLVLPPYNEFFIKADLSDVMLQLQYMQSLLPSSFESAGHVFLAPREYCKRLHLSD
NNTQFLQNFLSLMLDISPESDECDQGLIHNLILDSRIIGQLASRVWKNKDLNSYGFLAVF
ASTDGGITRVFPNIAAELWDEDPEPFNSNYYRRSLDNKGYMFRAPTRSSSDDPVGAENGT
VGILVSSAVEVNLGGKLLKPSVVGVKLDLEAWVDKFKILASNVSDSRQGSHKCGPSRSCE
MDCEVNTDDLLCYLIDDGGFLVMSNQRDHWKKIGLFFGDVDPYLMHALYNNSIFTRRQSF
HYQSACEPVSSSHTGAAPRGIFVPSIADMLSLAWWTSTVAWSVIQQLLYGLAYNSWLYQD
DVLVDGFETKESSCVTIQSQFYFTNTTNSYNMLQDCGNCSRLFHAKRIDNTNLLFVVAET
LPCSSCEIERLTQVRTEFQEENPCEVLSNARYRKGPTSCFDYSALENTSECGRGHALQSS
IGVLLFIQLILPLFHL
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atggcgataggcaaaaggtcttgcagcatcgtctgcttggtatctatccagattatcttg
attttcagcgcatcgtggcctggagcagcggctctcacgttcccacagcaatacacgata
atgcactgggccaggcgtatcgagcaggagattgacagagtctttcagcacatcactgga
gctcagcagttgaaagggatatacaatgaagaaagacgacagttcagtctggtgaggaat
cagcctcggaagattgtggagaaggtggcgtcggatatagagaaactcctggctaagaag
cgcaaagcactcgatagattggccagtgaagccgagcggctccaacgagagcatccatgg
caggatggaatcaaggagctggacatggcttattatgactcaaaggcagagctggattat
tattccatggatggagaaggagaggtggaaaatccttcgcacatcaagctggagtttgtg
tatgatccaaacttcaaaaacaatgtcaactactcctacacggctgttcagatacccaca
gatatttacaaaggagctccagtcattctgaatgagttgaactggacacaggcgctggag
aaagttttcatggagaacagccaggaggatccgtcactgctgtggcaagcattcgggagt
gcgacaggtgtcactcgctactacccagctacgccttggaaagctcctgataaaatcgac
ttgtatgacgtcaggaggaggccctggtacatccagggagcctcatcccccaaagatatg
gtcatccttgtcgatgtgagcggcagtgttagtggactcaccctgaaactgatcaaagca
tcagtgatggaaatgctggacactctgtctgatgatgactacgtcaacgtggccaggttt
aacgagaaggcagaagctgtggttccctgcttcaaacatctcgttcaggctaacgtacgc
aacaaaaagatcttcaaggatgcagtgcagcagatgcaggctaaaggcaccactgactac
aaatccggatttcattttgctttcaaccagcttttaaataaaacaaatgtcccgcgggcc
aactgcaataaaataatcatgctgtttactgacggaggagaggacagagctcaggatgtc
ttcatgcaatacaactggcccaacaaaacagttcgagttttcaccttttctgtgggtcag
cacaactatgacgtcacacctttacagtggatcgcttgcaccaataaaggttactatttt
gagatccgttccatctgtgctataaggattaacacccaggagtacctcgatgtgctggga
cgccccatggtcttggcaggcagcgatgccaagcaggttcagtggaccaatgtgtatcag
gacgctttgggtcttggcatggtggtaactgggactttacctgtatttaatctcactatg
gatggaaactcacagaatcagctgatattaggcgttatgggagtcgatgtgcatctcgat
gagataaagcgactaacaccacggtataatcttggagccaatggatatatatttgctatt
gatccaaatggttatcttctccttcaccctaatcttcagccaaagctcgtgaacctccct
gaacctgtgacactggacttcctggatgcagaggtggaggacagcaataaagaggagatc
cggcgacaaatgattgacggaagaccaggtgaaatgcagatcaaaactcttatcaagtcc
attgatgagcaatacatcgatgaggtgtacagaggttacacttggactcctatcaacggt
acagattacagtcttggtctggtattaccaccctacaatgagttcttcatcaaggcagac
ctgagtgatgtgatgctgcagcttcagtatatgcagtcgttgcttcccagctcctttgaa
tctgcaggccacgtgtttctggctccaagagaatactgcaaacgtctgcatctttctgac
aacaacacccagtttctgcagaatttcctgtcgctcatgctggacatttccccagaatct
gatgaatgtgaccaaggcctcatccacaacctgattttggattcaaggattattggacag
ctggcctctcgtgtttggaagaacaaggacttgaattcgtacggcttcctggctgtattt
gcgtcgactgatggaggaataacacgggtatttcccaacatagctgctgagttatgggat
gaggatcctgaacccttcaattcaaattactacagacggagcctcgacaacaaaggctac
atgttcagagctccaacgagatcctcctcggacgatcctgtaggcgcagaaaatggcaca
gttggtattctggttagttcggctgtcgaggttaatttaggaggcaaactgctcaaacca
tcagtggtcggagtgaagctggacttggaagcgtgggtggacaagtttaagatcctggcc
agtaatgtgtcagacagtcgacagggctcacacaagtgtggaccatccagaagttgtgag
atggactgtgaagtgaacaccgacgacctcctctgctatctcattgatgatggcgggttc
ctggttatgtccaatcagagagaccactggaaaaagattggtcttttcttcggtgatgtg
gacccttacctgatgcacgcactctacaacaactcaatcttcactcggcgtcagtctttt
cactaccagtctgcatgtgaaccagtcagcagcagccacaccggtgcagcaccgagaggc
atctttgtgccatccattgctgacatgctcagcttggcatggtggacatccacagtggca
tggtctgttatccagcagctactgtatggactggcctacaacagctggctctaccaagat
gatgtcctcgttgatggttttgagacaaaagagagcagctgtgtcaccattcaaagccag
ttctactttacaaacaccaccaactcctacaacatgctgcaggactgtggaaactgctca
cggctgttccacgcaaagcggatagacaacactaatctcctctttgtggtggctgagaca
ctcccctgcagctcgtgtgagattgagagactgacacaggtcaggacagagtttcaggag
gagaatccatgcgaagtactgagcaacgcacgatatcgtaaaggcccgacttcctgcttt
gactacagtgccttagaaaacacgtcagagtgtggacggggtcatgctctgcagtcctcc
ataggagtccttctctttattcagcttattctgcctctttttcatctctga
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