Larimichthys crocea (large yellow croaker): 104931349
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Entry
104931349 CDS
T04659
Name
(RefSeq) LOW QUALITY PROTEIN: SWI/SNF complex subunit SMARCC2
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104931349
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lco03021
]
104931349
03036 Chromosome and associated proteins [BR:
lco03036
]
104931349
Transcription machinery [BR:
lco03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
104931349
Chromosome and associated proteins [BR:
lco03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
104931349
PBAF complex
104931349
GBAF(ncBAF) complex
104931349
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_1
SWIRM
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
Motif
Other DBs
NCBI-GeneID:
104931349
NCBI-ProteinID:
XP_019127643
LinkDB
All DBs
Position
VI:8456140..8467172
Genome browser
AA seq
1130 aa
AA seq
DB search
MLCTAAPPAVTVPVITAPVCGAVQPGCSTGARPLGGSRRRRQTGSLQAKMAVRKKDGGPN
VKYFEASDTVSQFDNVRVWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQEEVFGRHVSNP
PLTKLPMKCFLDFKSGGALCHILAAAYKFKSDQGWRRFDFQNPSRMDRNVEMFMTIEKSL
VQNNCLTRPVIYLSPDIEPKLLGKLKDIIKRHQGSVTEDKASSSHVVVPIPTSLEEEEWV
RPVMKRDKQVLLHWGYFPDSYDTWIPASEVEAAVEDPPSPEKPRKVHAKWILDLDQYNEW
MNEEDYEVGEGCPKRKRISAKTLTDEVTTPDERRDKKPGSAKKRKRSPSPSPTPPPQESK
KKNTKKGPTTPYTKSKRGQREEEQEDLSKDMDEASPVPASEEGNPAKTNNTKKDSDSTPV
KGGTDMDEQEDESMETTGKEEEEGSPSVKGEPVKGSDLHEDNVTEQTHHIIIPSYAAWFD
YNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLAGDV
CAIMRVHAFLEQWGLINYQVDSESRPTPMGPPPTSHFHVLADTPSSLVPLQPKTSQPHTH
THTHRQKDTCKKILGRFKHLSVTVCSQTPATQQMMSFPDKVKDKPADLQNFGLRTDMYSK
KTSSVKSKSTASSMRDWTEQETLLLLEGLEMYKDDWNKVSEHVGSRTQDECILHFLRLPI
EDPYLEDNSSSLGPLAYQPIPFSQAGNPVMSTVAFLASVVDPRVASAAAKSALEEFSRMK
EEVPAALVEAHVRRVEEAARVSGRQDPLYGLEGSGIAGTGLEEGDRPDENSDESKNDGQS
NEEKREAKENKDGAIEEEEKQAENGKKEEERGREEGEREADKTESEMGDGEKEKDGKEGT
EEGQREAESEGERKAKVERDVGEGNLATAAASALAAAAVKAKHLAAVEERKIKSLVALLV
ETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADRQSFHMEQLKYAEMRARQQHFQ
QIQHQQHSQAGGPHSNQAVAGPPPQGPTATQPAPSTPAPQPAPSPAPPATSAPAPESQPP
QGQAHTSPPCPPGQTPAAHSSSSTTPVLHEPTAPLPGETLHPSAPVPPPQ
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgctctgcacagcggcgccacctgctgtcacggtgccggtcatcacagccccggtgtgc
ggggccgtgcagccgggctgcagcaccggagcgaggccgctgggcggcagccgacgtcga
cgacagactggcagtctgcaggcaaagatggcggtacggaagaaagacggcggcccgaat
gtgaaatatttcgaagcgtctgacaccgtttctcagtttgataatgtccgcgtctggctg
gggaagaattacaaaaagtacatccaggctgagccccccaccaacaagtctctgtccagc
ctggtggtccagctgctccagttccaggaggaggtgttcggccgacatgtcagcaacccg
ccactcaccaagctgccaatgaagtgttttctggacttcaagtcaggaggggctctctgc
cacatcctggctgccgcctacaagttcaagagcgaccaaggatggcgcaggtttgacttc
cagaatccgtcgaggatggaccgaaatgtggagatgttcatgacgatcgagaagtcctta
gtgcagaacaactgcctgacaagacccgtcatctacctgagccctgatatcgagccgaag
ctgctcgggaaactgaaagacatcatcaaaagacatcagggctcagtaactgaagacaag
gcctccagctcccatgttgtcgtccccattcccacgagcctggaggaggaggagtgggtg
cgtcccgtgatgaagagagataagcaagtgctgctccactggggatattttcccgacagt
tatgatacctggattccagccagcgaggtcgaagctgctgtggaggatcctcccagcccg
gaaaagcccaggaaggtccacgcaaagtggattttagacctggatcagtataacgagtgg
atgaacgaggaggactatgaagtgggcgagggctgtcctaagaggaagcggatctcagcc
aagaccctgacagacgaggtgaccacacctgacgagcggagagacaagaagcccggcagc
gcgaagaagaggaagcgctcgccgtcaccttctcccacccctccgcctcaggagagcaag
aagaaaaacaccaaaaaagggccaacgactccgtacaccaagtctaaacggggccagagg
gaggaggaacaggaggatcttagtaaggacatggatgaagcatcgcctgttccggcatct
gaagagggaaaccctgcaaagacaaacaacaccaagaaagactctgattcaactccagtc
aagggaggaacagatatggacgagcaagaggatgagtccatggaaacaacgggcaaggag
gaggaggaaggctctccgagtgtgaagggtgaaccggtgaaagggtcggaccttcacgag
gacaacgtgaccgagcaaactcatcacattattataccgagctacgccgcctggttcgac
tacaacagtgttcatgccattgagcgcagagccctgccagagttcttcaatggaaagaat
aaatccaaaactcctgagatttacctggcttacaggaacttcatgatcgacacctaccgg
ctgaaccctcaagagtacctgacctccaccgcctgccgcaggaacctggcaggagacgtg
tgtgcaatcatgagagtccacgccttcctggagcagtggggtctgatcaactaccaggtg
gactctgagagccggcccacacccatgggtcccccacccacctctcatttccatgtcttg
gcagacactccatccagcctggtgcccctccagcccaagacatcccagccacatacacac
acacacacacacagacaaaaagacacatgcaaaaaaattctgggtcgttttaaacatttg
tctgtcactgtgtgctcacagacccctgctacccagcagatgatgtccttcccagataaa
gtgaaggataaaccagcagatctgcaaaactttggcctgcggactgacatgtacagcaag
aagaccagctccgtaaagagcaagagtacagcgagctccatgagggactggacagagcaa
gaaacactactactactcgagggtttggagatgtacaaggacgactggaacaaggtttca
gaacacgtgggcagccgtacgcaagacgagtgcatcctgcacttcctgcggctgcccatc
gaagacccttacttagaggacaactcctcatccctgggaccgctggcctaccagccgata
cctttcagccaagcgggaaacccagtcatgagcacggtggccttcctcgcctctgtcgtc
gacccgcgcgtggcttcggctgcagccaaatctgctctggaggagttttctcgtatgaag
gaggaagtccctgcagcgcttgtcgaggcccatgtgcggcgggtggaggaggcggcgagg
gtcagtggccgacaggatccgctgtatggactggagggaagtggcatcgcaggcactggc
ctggaggaaggagacagacctgatgaaaacagcgatgaaagcaaaaacgacggccagtcg
aacgaagagaagagagaggcgaaggagaacaaagatggagcgattgaggaagaggagaag
caggcggagaacggcaagaaggaggaagaaagaggacgagaagaaggagagagggaggcg
gacaaaacagagtccgagatgggcgatggggagaaggagaaggatggaaaagagggcaca
gaggagggacagagagaagcagagagtgaaggagaaaggaaagctaaggtggagcgtgac
gtgggagaggggaacctggccaccgctgctgcgtctgcgctcgccgctgctgccgtcaag
gccaagcacctcgccgcagtggaagagaggaagatcaaatctctcgtggctctgctggtg
gagacccagatgaagaagctggagattaaactgcgacactttgaagaactggaaactatc
atggacagagagagggaggctttggagtatcagcgtcagcagctgctggctgaccgtcag
tccttccacatggagcagttgaaatacgctgagatgagagcccgccagcagcacttccag
cagatccagcaccagcagcacagtcaggcggggggtcctcattccaatcaggccgtcgcc
ggcccaccaccgcagggcccgactgcgactcagccagctcccagcacaccagcgccgcag
ccggcccccagccccgcacctccggccacctctgccccggctcctgagtcccaaccacct
cagggtcaggctcacacctcgcccccctgccctccaggccagaccccagctgcccactcc
agctccagcactactcctgtactccatgagcccaccgcccctcttcccggggaaacactc
cacccctcggctccggtcccacctccgcagtga
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