Larimichthys crocea (large yellow croaker): 104931414
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Entry
104931414 CDS
T04659
Name
(RefSeq) DNA-binding protein RFX7 isoform X3
KO
K09175
DNA-binding protein RFX7
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lco03000
]
104931414
Transcription factors [BR:
lco03000
]
Eukaryotic type
Other basic domains
RF-X
104931414
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFX5_N
RFX_DNA_binding
Pox_D5
Cdc6_C
Motif
Other DBs
NCBI-GeneID:
104931414
NCBI-ProteinID:
XP_010744717
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All DBs
Position
XXI:14884240..14898212
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AA seq
1483 aa
AA seq
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MADDQQQPDQKPASGLGSLPALVPGLQGPEANALQFKIKNSICKSVQSKVDSILQDVEKF
TDIEKLYLYLKLPSGPSSGNDKSDQSSMSSSRTQQMYAFNWIRNHLEEHPETSLPKQEVY
DEYKSYCDNLGYNPLSAADFGKIMKNVFPNMKARRLGMRGKSKYCYSGLRKKAFVHMPSL
PNLDLQKSGDGCELMESTGQSPSAEDEMRSAACGLVCEWAQKVLSRQFDNVEDLARFLLN
SHYIGTKSMAALTVMTGTPTGMKTPTPASAFVPTAEANSFQPQVKTLPSPSVDAKQQLQR
KIQKKQQEQKLHSPLPSETQIKRTEASTPGPTIPCGSPALLSPQPTIGIVVAAVPSPVTV
QRSRQLMTSPSPVGTTEGKVLPVNFQVVTQSLKQSPKTPQNISASPVGDRLARHGTRYAQ
ILPKPSATSAITLRSPPTLLITNSPIKTVMPTPHVSSVNVVKMTAIALAPSSSSATVRPA
SAGINTMAVSDDSQQLHGVSSVATQSPAIRPSAPSSTPTLSTDTKVVSESGNDNNPTSGM
EKTAGGAKEERVAKFRAASEPSFLVKCSPGPDKGVRVKHDSTSPPTSVSVAGTQDSNNSN
CHDSTLYLTVDNQNSNGNTSSNGSSAVTPTSKDPCSDAKSPRKRTGSSGESHVIPVKRVF
ISQQPLAVVDNPRLGVSAAVKRIPRPGTPARPESAPCKVTVKHTSIGPTQILALSDSPIT
HTVGSQTVVTSQTLVVKHEDHSLSTDTSTRAAGNNTSDQALLQQITGDPRAIPANSGAHE
ASVMSDLKSTIWEEGQLDELRKQAFAQQIPAEHKQAPTDQLSIIAQPPEASGQLTLTQEM
VDFAGSQPSMDYFPFNDDDMTQDSIVEELVQMEEQMKLKGLFGSCVDVSLQSQSASNQGT
ILNAHQAGTTFYHSAHSSTTPVQTPTPTPTPTPTPTPTSEMTLGHSLTRESPCSRMAPIT
PVDGAMGRHTPISTPLSNCSSSVPPSPVECRNPFAFTPINSSITGYHDASIVSSSPVKPM
QRPMATHPDKAKLEWINNRYNSNSASPLSNHSIGILPSYQDLVDDQFRKPHAFAIPGQSF
QAQSRQDAAHFGRLTPISPVQQQQQQQPQQQLVTTVTTPTKQESFAVPAPLDNKASTSST
SSTFRCRSVSPAVRQRNFSGNTGPPTTTTNTTTTTRAVVSPFNSPITSEVLSILSNNQTV
SSVHSMVQRSQSVPLNIMMQSEMLPVQGQSNTAKITNVLLSKMEADGDDSVRGLGINNLP
SNYTARMNLTQILETTPGFTGGTAHQTQLPVSSSPAAFELQQHGYLTAGSGEQVSFSTGD
SQAQAGPGEQDQQQQQQQQQQLQENPVQTQSQLLLQSTQQQEVEDEQQQLDFNNTVKDLL
GDDGLNPSSQLVGQVASELNAVASDFSNDIRLTSDLSSSITDLNTLDTNLLFDPNQQQEQ
YEDSTLEELKNDPLFQQICSDTVNSGFDWLESKDQPTTVEMLG
NT seq
4452 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgatcaacaacaacctgatcagaagcctgcctcgggattaggctctcttcca
gcgttggtgccaggactccaggggcccgaggctaacgcgttacagttcaaaataaagaat
tcaatttgcaaatctgtacaatcaaaagtggacagcatattgcaagatgttgagaagttt
acagacatcgaaaagctctacctctacctgaagttgccttctggtcccagcagtggcaat
gacaaaagtgatcagagttccatgtcatctagccgtactcaacagatgtatgcattcaac
tggatacggaatcacctagaagagcacccagagacttccctcccaaagcaagaggtgtat
gatgaatacaagagctattgtgacaatctcggctacaatccactgagtgcagcagatttt
ggaaagatcatgaagaatgtctttcctaacatgaaagcacgtcggctgggcatgagaggc
aaatccaaatactgttatagcgggttaaggaagaaagcttttgttcacatgccctcctta
cccaacctggatctgcagaaatctggtgatgggtgtgagctgatggagtcgacgggtcag
tccccgagtgctgaagatgaaatgagatctgcagcctgtggactggtgtgtgagtgggcc
caaaaggtcctgagtcgtcagtttgacaacgtggaggacctggcccgcttcctgctcaat
agccactacattggtactaaatccatggctgcactcactgttatgaccggaacacccaca
gggatgaagacaccaactccagcctctgcgtttgtgcccacagccgaggccaattctttc
cagccccaagtgaagaccctgccctctccctctgttgatgcaaagcagcaactccagcgc
aagatccagaagaagcagcaggagcagaagcttcactcacccctgcctagtgagacccag
atcaaaagaacagaggccagtacccccggccccactattccctgtggcagccctgctctg
ctctcccctcagcccaccataggcatcgtagtagcagctgtccccagtccagtcacggtg
cagagaagtaggcagttgatgacttcgcctagccctgtagggacaacagaggggaaagtg
ttgcctgtgaacttccaagtggtcactcagtctcttaaacagtcccccaaaactccccag
aatatctccgctagtcctgtgggtgaccgcctggcacgacatggtacacggtatgcccaa
attctgcccaagccctctgccaccagtgccatcacgctgcgctcacctccgaccctgctc
atcactaacagccccataaaaactgtgatgcccactccccacgtcagctcggtcaacgtg
gtgaagatgacggccatcgctctggctcccagcagcagcagtgcaaccgtgcgtcctgcc
tcagcgggtattaacaccatggctgtttcggatgattcccagcagctgcacggtgtgagc
tcggttgccactcagtctcctgcaatcagacccagtgccccatcctcgaccccaaccctc
tccactgacaccaaagttgtgtctgaatctggaaatgacaataaccccacctctggtatg
gagaaaacagctggtggggccaaagaggagagagtggctaagttcagggctgccagtgag
ccaagcttcctggttaagtgttctccaggtccagacaaaggtgtaagggtaaaacatgac
tccacatccccacccacctcggtatctgtagctgggactcaggacagcaataacagtaac
tgccatgacagtactttgtacttgactgttgataatcagaactccaatggcaacacatca
tccaatggctcctccgctgttaccccaacatcgaaggatccctgctcagatgccaagagc
cccaggaagcgcacaggctcaagcggggagtcccatgtgattcctgtgaagagggtgttc
atttcccagcagccactggctgtagttgacaatcccagacttggagtcagtgctgcagtg
aagaggatccccagaccaggaacccctgccagaccagagagtgccccctgcaaagtgact
gtgaaacacacctccatagggcccacacagatccttgcactctccgactcgcccatcaca
cacactgtgggctcccagactgttgtcacttcccagaccttggtggtaaaacatgaagac
cattcactcagcactgacaccagcactagagcagctggaaacaacacgtctgatcaggcg
ttgctacagcagatcaccggggaccctcgtgccataccagccaactcaggagcacacgaa
gcctctgtgatgagtgacttaaagagcacaatatgggaggagggacagcttgatgagctt
cggaagcaggcgtttgctcagcagataccagcagaacacaaacaagcccctactgaccaa
ctttccattatagctcaaccccccgaggcctcaggtcaactcaccctcacgcaggagatg
gttgactttgcaggttctcagcccagcatggactactttccattcaatgatgatgacatg
acccaggacagcatcgtggaggagctagtccaaatggaggagcagatgaagctgaagggc
ctgtttggtagctgtgttgatgtgtctttacaaagccagtcagccagcaaccaaggaact
attctaaacgctcatcaggccggcactaccttctaccactctgctcacagcagtaccact
cctgtccaaactcccactccgactccgactccaaccccaacacccacccccacctctgaa
atgacgcttgggcacagcttgacaagagagagcccgtgttcccgcatggctcccatcacc
cctgtggacggagccatgggtcgccacacccccattagcacaccactgtccaactgcagc
agcagtgtccccccaagcccggtggagtgcaggaacccttttgcattcactcccataaac
tcaagcattacaggatatcacgacgccagcattgtctccagcagccctgttaagccgatg
cagaggccaatggcgacacaccctgacaaggccaaactggagtggatcaataaccgctac
aacagcaactctgcaagtccgttgtccaaccatagcattggcattctgccaagctaccaa
gacctggtagatgaccagtttcgtaaaccacatgcttttgcaattcctggccaatcattt
caggctcagtcaagacaggatgctgctcactttggccgtttgacccccatttctccagtg
cagcaacaacaacaacaacaaccccagcagcagctggtaacaactgtaactactcccact
aaacaggagagtttcgctgtgcctgcaccattagacaacaaggcatcaacctcatctacg
tccagtactttccgttgccgcagtgttagccctgcggtgcgtcagagaaacttcagtgga
aacaccggccctccaaccacaaccacgaataccaccaccaccaccagagctgtggtttca
ccctttaactcccccatcacatctgaggtgctcagcatcctgtccaacaaccagacggtt
agctctgtccacagcatggtccagcgtagccagtctgtacctctgaatatcatgatgcag
agcgagatgctgcctgtgcagggtcagagtaacacagccaaaatcaccaatgttcttctc
agcaagatggaagccgatggtgatgattctgttcgtggcctgggcataaacaaccttccc
tccaactacacggcccgtatgaaccttacacagatcctggagaccactcctgggttcact
ggaggaacggctcaccagactcagctgcctgttagctccagccctgctgcctttgagctc
cagcagcatggctacctcaccgctggcagtggagaacaggtgagtttctccactggggac
agccaagcacaagcaggtcctggtgagcaagaccagcaacaacaacaacagcagcagcag
cagctccaggagaatcctgtgcagacacaatcacagctcctcctccagagcacacagcag
caggaggtagaggacgagcaacaacagctggacttcaacaacactgtcaaagacttgttg
ggggatgatggcctcaaccccagttcccagttggtgggtcaggtagcttcagagctcaac
gctgtggcgtccgacttctcaaacgacatcagactgacctcagatctgtccagtagcatc
actgaccttaacacgttggacaccaacctgctgtttgatcccaatcaacagcaggaacaa
tatgaagactcgacactggaagaactgaagaacgacccgctttttcagcagatatgcagt
gatactgtgaactctggttttgactggctagaaagcaaagaccagcctactacagtagag
atgctgggctaa
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integrated database retrieval system
