Larimichthys crocea (large yellow croaker): 104931533
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Entry
104931533 CDS
T04659
Symbol
exosc4
Name
(RefSeq) exosome complex component RRP41
KO
K11600
exosome complex component RRP41
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104931533 (exosc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lco03019
]
104931533 (exosc4)
Messenger RNA biogenesis [BR:
lco03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
104931533 (exosc4)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
104931533 (exosc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
104931533
NCBI-ProteinID:
XP_010744857
UniProt:
A0A6G0IH59
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Position
II:12095442..12097668
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AA seq
245 aa
AA seq
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MAGLELLSDQGYRLDGRKATELRKVQARMGVFAQADGSAYLEQGNTKALAVVYGPHEMRG
SRSRARHDRAVINCQYSMATFSTAERKRRPHGDRKSTEMSLHLKQTFEAAVMTQLYPRSQ
IDIYVKILQSDGGNYSVCVNAATLAVIDAGIPMRDYVCACTVGFVDETPLADLCYAEESG
GVSSLALALLPRGGQIALLQMDARLHQDHLEALIEAAMTACKGVSKVLDQVVRQHLQEAS
VNSAE
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcttggagctgctgtctgaccagggttaccgcttagatggaagaaaagccacc
gagctgcggaaggtccaggcccgcatgggtgtgttcgctcaggccgacggctccgcgtat
ctagagcagggaaacacgaaggctctggcggtggtttacggtccacatgaaatgcgaggt
tcacgcagccgggctcgtcatgatcgagctgtcatcaactgtcagtacagcatggccacg
ttcagcacagcagagaggaagaggagaccacacggggaccgcaagtccaccgagatgagc
ctccacctgaagcagacgtttgaagccgctgtgatgacccaactctacccacgctctcaa
atagacatctatgttaagatcctgcagtcagatggagggaactacagcgtatgtgtgaac
gctgccactctggccgtgattgacgccggcatccccatgcgggactacgtgtgtgcctgc
acggtcgggtttgtggacgagacgccgctcgctgacctttgctatgcagaggaaagtgga
ggagtgagctctctggccttagcgctgctgccccgcggcggacagatcgctctgctgcag
atggacgccaggctacatcaggaccacttagaggctctgatcgaagctgccatgacagct
tgtaaaggtgtgagcaaggtactggatcaggtggtgcgacaacatctccaagaagcgtct
gtgaactctgcagagtga
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