Larimichthys crocea (large yellow croaker): 104931597
Help
Entry
104931597 CDS
T04659
Name
(RefSeq) protein capicua homolog isoform X1
KO
K20225
capicua transcriptional repressor
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lco03000
]
104931597
Transcription factors [BR:
lco03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
104931597
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4819
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
104931597
NCBI-ProteinID:
XP_019126319
LinkDB
All DBs
Position
XIII:complement(9896921..9930430)
Genome browser
AA seq
2524 aa
AA seq
DB search
MKPIKKQGRRSPPSTRAKGGKRRGVGDAPEGGEKRDSDENRDRSRSPQNRTPSSCFSSNS
HSESSQVDPIRARDASEAEGLHREGLSETTVSLTVDSGKLLTSSDDRSGRSAVSGSSDSG
GSSCSNSSTPSANNSPNPASSRKTATFKARVPKKKYTSEHCSSTTGNHSNPSSSTPPPLP
LSGGVINHGSTGSGSDICVSHPDGNSQSRSLMDDFHSRTTGREGPQDGSPGPPTLSLGGE
RERPGRGEGVREAERVSPSPLPRCSSTDTASEHSADLEVVGDTQAHMQMSSHAPPSLPDT
LSDALAKGLKNQRVLARQLRRRSDQDGASERRDEVACSDLVFRAGVVRKVSGEFGSLEVQ
LNGEKTLWRYPYRHDSPPGVVDIILDAPPPGVHPIPIGTRVCVPFGNEEGSEGQWQWYRE
GVVTQVDTHPAVANRYRVLLSEERSHSVEAEEDGRAGATQAVWVSRQTLRLLVPPWDLDL
PSGGGRDGDEGLRDKEREREDREEMDMEQEVCRSSHGMVPGVGSGRGIPYPGMVPVSSTS
VHNITSPITPASVLSLAPGREWEIEKDLERERDLQRKQDRERERERERENSVKQQQQHQQ
QQLHPYMPLTPEEDMEVSHFNMVPMGAIIPGAKSMAVPQHRHIVSKPPPGYLNPHLSVVR
GIGIPPAHLALNPHPPPSPVLLGLDPAAAAVITTPQLPPLPPISSSTASSSRVDKTSGGG
SSGGGAGGGSGSGSTSSSSSRSRTPLTAAQQKYKKGDVVCTPTGIRKKFNGKQWRRLCSR
EGCSKESQRRGYCSRHLSMRTKEMEANGGSRERGGASSTGTLTPSDLRLSTGRASSDFDW
DETSRESSEASSRGGDSRPRLVLPSLHPQDLSRFDFDECEAATMLVSLGGSRSGTPSYSP
ISNQSPFSPTPSPSPSPLFGFRPANFSPITAPASLTPRRHRQLSGTKMGTPGAERERHLS
GIVPTFQTNLTFTVPMSPSKRKLDTHPPPPLPAVQDYQTKPEQQQLVGLGGGMVGDSILG
HNPAAFRVLSPQSQPTTPSSLSFPRPRSATSRPPSSAASTPPPMLVSPTPPSPLPQEPSP
RRNVPLRDSPVIVRNPDVPLAKFTEGPLGRRERSRSREHSQPQHSAPPGLQVPIPINGAT
TNGAVLLRNPTSTLVLVTSSSSLTPASVGHAALSSSSAPGSMPTSSGSVLSSSGSGGRER
ERKPEGHQDASGGALPQPVACHPTPTALLPLILPAESPHPAPRKQIIMGRPGTVWTNVEP
RSVPVFPWHSLVPFLEPSQSGAAAQPADGQQLVNQSKEPRFGVAPVSDGRSGPPDLERGS
PSCPPPTNDNPPADRGGADSETESDIDDPFSPGVANDPAPSTGPMKRRTQSLSALPKDGD
RKREKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYALGPNEKQQYHDL
AFQVKEAHFKAHPDWKWCNKDRRKSLSEGRGTPKEPRERSMSESIEPHPESQVLEGKGGG
SGWPGGSERQGGLFVGQHPRPRAFSQSAVHTLEQRERERDLEKEDGASLFRHRPLPQSLY
EGGASEDVTSDEERMVICEEEGDDDVMEDSCPEGSIDLKCKERVTDSDEDEPDGQHGFQP
VARSSSSPSIPHSDSTSAKGNGGGGGGGGGGEEGSERKRKRATDGGEEGSEGGSKREEAE
AGGGEGGGGGGQGVSSLSITTSGTQAPLIVPQQGLTQVLGAVRMAPTMVTNVVRPIASTP
IPIASKPVEGAVTLSSLPQDKKATLLIGGGGPQQLPISAGGGYLSSSSSPGPVSVTPLGG
GGLVTNLVLAGSFPTAQPAVQLVPPQPHAQTPVPVLQPQLHPTAATTTTTNTSSLTPPAG
PKPLAQVQYILPTESPSSPQLTHQQILSLPTNAALANGVHSGVGIRVASVSPGTRVQTQS
PVLQSKMLVPMATVRTGSTPPHPSISLVAPPLPVQNGPATANKIIQIAPMPVVQTNVHPN
GAAAVHPGSPFPVSVATVMQAPGAAPPQTVLLTSPPTRITYVQSGPGVTTATPQQAAPAP
GPAYLPSSLATLGFTAIAPAGQTLVQPIVGQPPLLAPAPPLSCQSQTPPGQASEAAGRQV
LTAIYPAPTVALATGVVSVTTVPPAVAAPAQDIMNPSSPMATGVQGSAAATPEPNVAVEV
EPKVEVKRESQLDSHAEEGGYGLSSYTPASSLATCMINAMAVKKEEDVGLHIKEENLRDG
HDRERERGMSSEKKADREDHSMGDSSKEAGPRSPPPPPSGLDPPPPPPAERDPPTSSKKT
KFRPPPLKKTPDTLDKVLSETYFEERFAELPEFNPEEVLPSPTLQSLATSPRAILGSYRR
KRRNSTELELTAEDPSSPRRKTRRLSSCSSEPNTPKSAAKCEGDIFTFERAGTEGEDLLG
DLDRVPYSSLRRTLDQRRALVMQLFQDHGFFPSAQATAAFQARYSDTFPTKVCLQLKIRE
VRQKIMQTATPGALELGGSVEGSGAPSHSSSFNQSAREDGGAEQQQQPGDKGRRSPEEPK
SEGS
NT seq
7575 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgataaagaagcaggggcggcgctctcctccctccacccgggccaaagggggg
aagcgacgcggagtgggggatgcccctgaaggaggggagaagagagactcagacgagaac
agagacagaagcagatccccgcaaaaccgaacaccctcttcttgtttttcatcaaattca
cactcagagtcctcccaggtggacccgatcagagcacgggatgcttcagaggcggagggt
ctccacagagaagggctgtcggagacgacggtgtcactcacagtggattctgggaagttg
ttgacatcctcggacgacagatcggggaggtccgccgtgagcggcagcagcgacagcggc
ggcagcagttgcagtaacagcagtacgccgagcgccaacaacagcccgaaccccgcctcc
agccggaaaacagccaccttcaaggcgcgcgtccccaaaaagaagtacacctccgaacac
tgctcgtctactactggtaaccatagcaacccttcctccagcacgccccctcctcttcct
ctcagcggtggggtcattaaccacgggtcaacgggttcaggaagtgacatctgcgtctcg
caccctgatggcaacagtcagagtcggagcctgatggacgacttccacagcaggaccacc
ggcagggaggggcctcaggatggctccccaggaccccctaccctgtcgctgggaggggag
agggaaaggcctggaagaggtgaaggtgtgagagaggcagagcgagtgtcgccaagcccc
ctaccccgctgctcctcaacggacaccgcgagcgagcactcagccgacctggaggttgtc
ggtgacacacaagcccatatgcagatgtcttcacatgcaccacccagcctccccgacaca
ctgtccgacgccttagccaaaggcctgaagaatcagcgtgttctcgcccgccagctcagg
agaaggagtgaccaagatggagcgagcgaaaggagggacgaagtggcgtgttcagacttg
gtgttccgggctggggtggtccgtaaggtcagcggtgagtttggaagcctggaggtgcaa
ctaaacggcgagaagacgctgtggcgttatccatatcgacatgacagccccccaggggtg
gtggacattatactagatgccccgccgcctggtgttcatccaatacctattggcacccgt
gtctgtgtaccatttggcaatgaggagggcagcgagggccagtggcagtggtacagggaa
ggtgtggtgacccaggtggatacgcaccctgcagtggccaaccgctaccgcgtcctgctg
tctgaggaaagatctcactctgtggaagcagaagaggatggcagagctggtgctacccag
gcggtgtgggtctcccgacaaacactccgacttctggtgccaccctgggacctggatctg
ccgtccggaggaggccgagatggagacgaagggctcagagataaagaaagggagcgggag
gacagggaggagatggacatggagcaggaggtctgtcgttcgagccatgggatggtaccc
ggagtggggtcaggaagaggaataccttacccaggcatggtcccggtttcctccacatct
gtccacaacatcacctccccgataaccccagcatcagtcctcagcctcgctcctggcaga
gagtgggaaattgagaaagacttggagagggagagggacctccagagaaaacaggataga
gagagggaaagagagcgagaaagggagaacagtgtaaagcagcagcagcagcatcaacag
cagcaactccacccgtacatgccactcacccccgaagaagacatggaggtgtcccatttt
aacatggtcccaatgggggcgatcatacccggggccaaatctatggcagttccccaacac
cgccacattgtctctaagcccccacctggctacctcaatccccacctgtctgtggtgcgg
ggcatcgggatcccccctgcacacctggccttgaacccccacccacctccatcacctgtc
ctgttaggcctcgatccagcagctgctgcggtcatcaccaccccccagctccctccactc
cccccgatctcctcttctactgcatcctcctccagagtggacaaaacttcaggaggaggc
tcctccggcgggggagcaggtggtggatcaggatcaggatccacttcctcctcctcctca
cgttcccgcaccccgctcacagctgcccagcaaaagtacaagaagggagatgtggtgtgc
acaccgacaggcatccgtaagaagttcaatgggaagcagtggaggaggctgtgctccaga
gagggctgctctaaggagtcccagcgccgaggatactgctccagacacctctcgatgagg
accaaggagatggaagccaacggaggcagccgggaacggggtggagccagcagcacaggg
accctgacgccgtctgacctccgtctgagcacgggcagagccagctcagactttgactgg
gacgagacgtcacgggaaagcagcgaggccagcagccgcggaggagactcccgtccccgc
ttggtccttccctctctccaccctcaggatctctcccgttttgacttcgatgagtgtgag
gcagcgaccatgctggtctccctggggggctctcgttcaggcacaccctcatactcccct
atctccaaccagtcgcccttctcccctacaccatcgccctcgccctctccgctcttcggc
ttccgccctgccaatttcagccccatcactgctcccgcctcacttactccacgccgccat
cgccagctaagcggcacgaagatgggcacgccgggcgccgagcgagagcgtcacctgtcg
gggattgtgcccacttttcagaccaacctcacattcacagtccccatgagccccagcaag
aggaagctcgacacccacccgcctcctccgcttcctgctgtccaggactaccagaccaaa
cctgagcagcagcagttggtggggttaggtggaggcatggtgggagactcaatcctgggc
cacaaccctgccgcctttagagtcctctcccctcagagtcaacctacaacgccctcctca
ctctccttcccccgaccccgtagcgccaccagcaggccaccatcctcagctgcctccacg
cctccacccatgctggtatctcccactcctccctccccgctgccgcaggaaccctcccca
cgccgaaacgtgcccctccgcgactccccggtcatcgtccgtaacccagatgtccccctg
gccaagttcacagagggtccgttaggacggagggagaggagcaggtccagagagcacagc
cagccccaacactcagctccacccggcctgcaggtccccatccccatcaacggggccacc
accaacggtgcagtcctcctgcgcaaccccacatccacactcgtcctggtcacatccagc
tcgtccctgactccagcctcagtgggccacgccgccctgtccagctcctctgcccccggg
tcgatgcccacgtcatcaggctcagtcctgtcttcctctggttccggtggcagggagagg
gaaaggaaacccgagggacaccaggacgcctctggaggggcgctgccgcagccggtagcc
tgtcacccaacgccaacagctctgctgccgctcatactgccagccgagtcgcctcaccct
gctccacgcaagcaaatcatcatgggacgtccagggactgtttggaccaacgtggagcct
cggtcggtgccagtgttcccttggcattcactcgtccctttcctggagcccagccaatca
ggagcggctgcccagcctgctgatggccaacagcttgtcaatcagagcaaagagcctcgt
ttcggcgtggccccggtgagcgacgggcggtccggccctccagaccttgagaggggctcg
ccgtcgtgccctcccccgaccaatgacaatcctcctgcagataggggcggggctgacagc
gagacagagagcgatatagatgacccgttttccccgggtgtggccaacgatccggcgccc
tccactggccccatgaagagacgcacacagtccctcagcgccctgcctaaggacggagac
aggaagagggagaaggaccacatccgccgtcccatgaatgcattcatgatcttcagtaaa
cgccaccgcgccctggtacaccagcgacaccccaaccaggacaaccggacagtcagcaag
atcctgggggagtggtggtacgctctggggcccaacgagaagcagcagtaccacgatctg
gccttccaggtgaaagaggcccacttcaaagcccacccagactggaagtggtgcaacaag
gaccgcaggaagtctctgtcagagggccgtgggacgccaaaggagccacgggagaggagc
atgtcagagagcatagagccccatccggagtcccaggtgctcgaggggaaaggaggaggc
tcgggctggccggggggatcagagcgtcagggggggctgtttgtagggcagcatccccgt
ccccgagctttctcccagagtgccgtgcacaccctggagcagagggagcgagagagagac
ctggagaaggaggacggggcgagcttgtttcgccatcggcccctgcctcagtccctgtac
gagggcggcgccagcgaagacgtgaccagcgacgaagagcgcatggtcatctgcgaggag
gagggggacgatgatgtgatggaggattcctgtcctgaaggctccatcgacctcaagtgc
aaagagagagtgacggacagcgatgaggacgagccagacggacagcatggcttccagcca
gtggctcgctcctcttcttctccctccatccctcattccgactccacctcagctaaaggg
aacggaggaggaggaggaggaggaggaggtggtgaagagggctctgagaggaagagaaag
agagctacggacggaggagaggaggggagcgagggaggatccaagagagaagaagcagaa
gcaggcggaggagaaggaggtggaggaggcgggcagggtgtctcctctctgtccatcacg
acatccggcacccaagctcccctcattgtgccccagcagggcttgacccaggtcctcggc
gccgtccgcatggctcccactatggtgaccaatgtggtgcgacccatcgccagcacgccc
atccccatcgcgagtaagcccgtggaaggagccgtcaccctcagctccctgccccaggac
aagaaagccactctcctgattggaggaggcggacctcagcagctgccaatcagtgcaggg
ggtgggtacctgtcctcatcctcctctcccggtccagtcagtgtaacccctttgggcggc
ggcggcctggtcactaacctggttctggcagggtcctttcccaccgctcaaccagccgtg
cagctcgtccccccgcagcctcacgcacaaacccccgtacctgtcctccagccccagctc
caccccactgctgccaccaccaccaccaccaacacctcctctctcacacctcccgccggc
cccaagccgctagctcaggtccagtacatcctgcctaccgagagcccctcctcccctcag
ctcacccaccagcaaattctctccctgcccaccaatgccgccctggccaatggcgtgcac
tcgggcgtgggaatcagagttgcgtcagtcagccctgggaccagagtccaaacgcagtcg
cccgtcttgcagagcaagatgttggttcccatggcaacagtgagaacagggtctactcct
cctcatccttccatctccctggtcgctccgcctcttcctgtgcagaacggccccgcgacg
gcaaacaagatcatccagatcgctcccatgcccgtggtccagaccaacgttcaccctaac
ggcgcagcggcagtgcaccctgggagcccctttcctgtttccgtggcaacggtgatgcag
gctcccggtgccgcgcccccacagaccgttcttctgacctctccacccaccaggatcacc
tacgtccagtctggcccaggagttaccacggcaacaccccaacaggccgcacccgctcca
ggccctgcctatctcccatcgtctctggcaaccctcggcttcaccgccatcgccccggcc
gggcaaactctggttcagccaatcgtcggtcaaccgccactgctagctccagctccgccc
ctgagctgtcaatcacagacccccccaggtcaggcctcggaagctgctggtcgccaggta
ctaactgccatctatcctgcaccgactgtcgcactggctaccggcgtggtctctgtgaca
accgtgccgcccgcagtggccgccccggcccaggacatcatgaacccttcctctccgatg
gcgacaggggtgcagggttcggcggcggcgaccccagagcctaacgtggcagtggaggtg
gagccaaaggtggaggtgaagagggagagccagctggacagtcacgccgaggaaggagga
tacgggttgtcgagctatactcccgcctcctcgttggccacctgtatgattaatgccatg
gcagttaaaaaagaggaggacgtcggcctgcatatcaaagaagaaaatctgagagacgga
catgacagagagcgagagagagggatgagcagtgaaaagaaggcagacagagaggaccac
agcatgggcgacagcagcaaagaggctggacctcgttcccctcctccaccaccctcaggt
ttggacccccctccacctccccctgcggaaagagacccaccgacttcctcaaagaagacc
aagttccgaccaccaccactcaaaaagacacccgacactctcgacaaggtcttgtcggag
acgtactttgaggagcgttttgctgagcttccagagtttaacccagaggaggtcctgcct
tcgcccactctgcagagtctggccacctcaccgagagccatcctgggaagctaccgcagg
aagagacgcaactccacggagctggagctgacagcagaagaccccagctccccgaggagg
aagacccgtcgtctctccagctgcagctcagagcccaacacccccaagagcgccgccaag
tgtgagggagacatcttcaccttcgagagagcaggtacagaaggagaggatcttcttgga
gatctggaccgggttccctactcgtctctgcgtagaactctggatcagcgccgcgccctg
gtcatgcagctgtttcaggatcacggcttctttccctcagctcaggccactgctgctttc
caggcacgctactcggacaccttccccaccaaggtgtgcctgcagctgaagatccgcgaa
gtccgacagaagatcatgcagacggccacgcccggagccctcgagctcggaggctcagtt
gaaggcagcggcgccccgtcccacagctcctctttcaatcaatcagcccgggaggacgga
ggggcggagcagcagcagcagcccggagacaaaggccggaggagccccgaggagccgaaa
agcgaaggatcctaa
DBGET
integrated database retrieval system
