Larimichthys crocea (large yellow croaker): 104931640
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Entry
104931640 CDS
T04659
Symbol
nr1d2
Name
(RefSeq) nuclear receptor subfamily 1 group D member 2
KO
K08531
nuclear receptor subfamily 1 group D member 2
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lco03000
]
104931640 (nr1d2)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
lco03310
]
104931640 (nr1d2)
Transcription factors [BR:
lco03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
104931640 (nr1d2)
Nuclear receptors [BR:
lco03310
]
1. Thyroid hormone like
1D. Rev-Erb
104931640 (nr1d2)
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
104931640
NCBI-ProteinID:
XP_019123446
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Position
XIII:5783154..5802212
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AA seq
595 aa
AA seq
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MESTKAGGVIAYISSSSSGSSPESCHSDSSNGSYQSSSPPHGSSPSRHQLGQPADPTIPA
GGQNLPGTQKSGRSSSTAKCGITKINGLVLLCKVCGDVASGFHYGVHACEGCKGFFRRSI
QQNIQYKKCLKNESCPIMRINRNRCQQCRFKKCLMVGMSRDSVRFGRIPKREKQRMLLEM
QSAMNNMMNNSQLHSQLHSSQTLPIGKPLPASATELTSDDTGPAPSCSPSSQSDSSSDPE
PTVAMDTSPSSASPSASDSGEEEVIGSVTRAHQETFMYNQEQSNLTAEAQPPTGALSGGS
AKNATNHRMEERQEVWNHHNNMVTMEAQDPPSSVGPQNQEDNTTTNNNNHCPFRLPRSAA
SSHCPAYSHGAFRAPPTEGPVNGAYSGPLWRGGNRMYLVCPMNTSAHVDPQKSGHEVWEE
FSHSFTPAVREVVEFAKKIPGFRDLSQPDQVSLLKAGTFEVLVVRFASLFDVKDRTVTFL
GGKKYSVDTLKAMGAGDLLNSMFDFSEKLINLGLSEEEMSLFTAVVLVSADRSGIENVNS
VEALQETLIRALRSLITKNHPNESAIFTKLLLKLPDLRSLNNMHSEQLLAFKVHS
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgaccaaagctggaggcgtaatagcctacatcagctcatccagctccggctct
agcccggagtcgtgccacagcgactcctccaacggcagctaccagtcatcctccccgccg
cacggctcctcgcccagccgccaccagctgggtcagccggctgaccccacgatccccgcc
ggcgggcaaaaccttccagggacgcagaaaagcggacgctcgtcctccaccgccaaatgt
ggcatcacaaaaatcaacggcctggtgctgctgtgtaaggtgtgcggcgacgtggcctcc
ggtttccactacggcgtccacgcctgcgagggctgcaagggcttcttcaggaggagcatc
cagcagaacatccagtataagaagtgccttaagaacgagagctgccccatcatgaggatc
aacaggaaccgctgccagcagtgccgcttcaagaaatgcctgatggtgggcatgtccaga
gactccgtgcgttttggccgtatccctaagcgggagaaacagcgcatgctgctggagatg
cagagtgccatgaacaacatgatgaacaacagccagctgcacagccagctgcacagcagc
cagacgctacctatcggcaaaccgctgccagccagtgccacagaacttacctccgacgac
acgggccccgccccctcctgctcaccgtccagccaatcggactccagctccgacccagaa
cccaccgtggccatggacaccagccccagctcggcctcgccaagcgcgtccgacagcggg
gaggaggaggtgatcggctccgtgaccagggcccaccaggagaccttcatgtataaccag
gagcagagcaacctgacggccgaggcccagccccccacaggtgccctgagcggcggctct
gccaaaaacgccacgaaccacaggatggaggagcggcaggaagtctggaaccaccacaac
aacatggtcaccatggaagcacaagatcccccctccagcgtggggccccagaatcaggag
gacaacaccaccaccaacaacaacaaccactgccccttcagactgcccaggagtgccgcc
agcagccactgtccagcctactcgcacggagccttcagagctccgcccacagagggcccc
gtcaacggagcctacagcggacccctgtggagaggaggcaaccgaatgtatctggtctgt
ccaatgaacacgtctgctcacgtggaccctcagaagtctggccacgaggtgtgggaggag
ttctctcacagcttcacccccgccgtcagggaggtggtggagtttgccaagaagatccca
ggcttcagagacctgtcccagcctgaccaggtcagcctgctgaaggctggcaccttcgag
gtgctggtggtccgcttcgcttctctcttcgacgtgaaggaccgcactgtcacctttctg
ggtgggaagaaatatagcgtggacaccctgaaggccatgggagctggggacctcctcaac
tccatgtttgacttcagcgagaagctcatcaacctgggcctcagcgaggaggagatgagc
ctcttcaccgccgtggttctggtctcagcagatcgctcgggcatcgagaacgtgaactcg
gtggaggccctgcaggagacgctgatccgcgccctgcggagcctcatcaccaagaaccac
cccaacgagtcggccatcttcaccaagctgctgctcaaactgcccgacctgcgctcgctc
aacaacatgcactccgagcagctgctggccttcaaggtccattcctga
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