KEGG   Larimichthys crocea (large yellow croaker): 104931646
Entry
104931646         CDS       T04659                                 
Symbol
pus1
Name
(RefSeq) tRNA pseudouridine synthase A
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
lco  Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:lco00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:lco03016]
    104931646 (pus1)
Enzymes [BR:lco01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     104931646 (pus1)
Transfer RNA biogenesis [BR:lco03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    104931646 (pus1)
 Prokaryotic type
    104931646 (pus1)
SSDB
Motif
Pfam: PseudoU_synth_1 DUF2344
Other DBs
NCBI-GeneID: 104931646
NCBI-ProteinID: XP_010745000
LinkDB
Position
IX:complement(5487601..5489728)
AA seq 421 aa
MFKIRPLLSALINQRLTLERNGGLYNFLCMMSEASRDEQTAKPLKRSNEENEDSAERAQD
AKRIKAEGEQAEDEKKYPKKKVALLLAYSGKGYYGMQRNPGTTQFRTIEDDLVTALIKSG
CIPENHGDEMKKMSFQRCARTDKGVSAAGQVVSLKVRLIEDIVEKINGHLPPQIKVLGLK
RVTQSFNSKNNCDARTYSYMLPTVAFSPKDYDTGNIAAFRLEPETLQRANRLFALYKGTH
NFHNFTSQKAPSDPSARRYITEMSCGEPFINNDTEFAVITVRGQSFMMHQIRKMIGLVIA
VIKGYAKEDVLERSWGQEKVDVPKAPGLGLVLERVHFDRYNKRFGGDGLHERLEWEREGE
AIRAFKEAHIYPTIVETECQEGSMVSWMSTLPVHDFEETATVTQDNKDQKQDNADVGNEA
D
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgtttaaaatccgaccactgctcagtgccttgattaaccagagactgacgttagagaga
aacggtggcttgtataacttcctttgcatgatgagtgaagcatccagagacgagcagacg
gccaagcccctgaaaagatccaacgaggaaaatgaagacagtgcagagagggcacaggat
gcaaagaggataaaagcagagggcgaacaggctgaagatgaaaagaaataccccaaaaag
aaagtggccctcctcctggcttactctgggaagggatattatggcatgcagagaaatcct
ggaaccacccagtttcggaccattgaagatgatctggtcactgcgcttattaaatctgga
tgcattcctgagaaccacggcgatgaaatgaagaagatgtctttccaaagatgtgccaga
acagataagggtgtgtctgcggctggtcaagtggtgtctctaaaggtgcggttgattgaa
gacatcgttgaaaaaatcaatggacatctgccgcctcagatcaaagtgctcggtcttaaa
cgggtgacccagagtttcaattccaaaaacaactgcgatgctcgtacgtactcttatatg
cttccaacagtggccttttccccaaaagactatgacactgggaatatagcagcctttcgc
cttgagccagagacacttcagagggcgaaccgtctgtttgctctatacaaaggcacccat
aacttccacaactttacctctcagaaggctccaagcgaccccagtgcccgccgctacatc
acggagatgtcttgcggagagcctttcatcaacaacgataccgagtttgcggtgatcacc
gtgcgaggccagagcttcatgatgcaccaaatccgcaagatgatcggcctggtgattgct
gtgataaagggatatgcgaaggaggacgtgttggagaggagctggggacaggagaaggta
gacgtgcccaaagctccgggactggggttggtcctggagagggttcattttgaccgatac
aacaaacgtttcggaggggacgggctgcatgagcggctggaatgggaacgcgagggggag
gcgatcagggcctttaaggaggctcacatctaccccaccattgttgagacggaatgtcag
gagggctccatggtcagctggatgtccacgcttcctgtccatgactttgaagagacagct
accgtcacacaagacaataaggaccagaaacaggacaacgcagatgtaggaaacgaggcc
gactag

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