Larimichthys crocea (large yellow croaker): 104931748
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Entry
104931748 CDS
T04659
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04517
IgSF CAM signaling
lco04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
104931748
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
104931748
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lco04812
]
104931748
Cytoskeleton proteins [BR:
lco04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
104931748
Intermediate filaments
Intermediate filament-binding proteins
104931748
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
PH_11
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
104931748
NCBI-ProteinID:
XP_019115050
LinkDB
All DBs
Position
Unknown
AA seq
2379 aa
AA seq
DB search
MELQSATSGLPSLPLSPGPLSPTMDYAGPLSPSSAGPSHASPGRGPSPSLSPIRGSSPSP
GFSGQAAFNYNQLEGRFKQLQDEREAVQKKTFTKWVNSHLSRVSCRITDLYMDLRDGRML
IKLLEVLSGERLPKPTKGRMRIHCLENVDKALQFLKEQRVHLENMGSHDIVDGNHRLTLG
LIWTIILRFQIQDISVETEDNKEKKSAKDALLLWCQMKTAGYPNVNIHNFTTSWRDGMAF
NALIHKHRPDLIDFDKLKKSNAHYNLQNAFNLAEQHLGLTKLLDPEDISVDHPDEKSIIT
YVVTYYHYFSKMKALKVEGKRIGKVLDNAIETEKMIEKYESLASDLLEWIEQTIIILNNR
KFANSLVGVQQQLQAFNTYRTVEKPPKFTEKGNLEVLLFTIQSKMRANNQKVYTPREGKL
ISDINKAWERLEKAEHERELALRTELIRQEKLEQLARRFDRKAAMRETWLSENQRLVSQD
NFGYDLQAVEAATKKHEAIETDIAAYEERVQAVVAVAKELEAESYHDIKRITARKDNVIR
LWEYLLELLKERRLRLEMNLGLQRVFQEMLYIMDWMDEMKMLLLSQDYGKHLLGVEDLLQ
KHALVEADIAIQADRVRNVNGNAQKFANDMDGYKPCDPQIIRDRVAHMDFCYQELSQLAA
ERRARLEESRRLWKFFWEMAEEEGWIREKEQILSSEDYGKDLTGALRLLSQHKAFEDEMS
GRAAHLQQTIKQGEELVANNHFGADKIKERIQDIQEQWAALERLSAVRKARLQEACNQHQ
FQADADDIDTWMLDVLRIVSSVDVGHDEFSAQALVKKHKDVAEEIGSYRPVIDALHEQSR
TLPPEKANSEEVQNRLAGIEERYKEVVELTRLRKQALQDALALYRMLSEANACEVWIDEK
EQWLNSMEIPEKLEDLEVVQHRFESLEPEMNNQASRVAVVNQVARQLIHSGHPSEKEIKA
QQDKLNTRWSQFRDLVDQKKDCLNSALGVQNYHLECNETKSWIKEKTKVIESTQELGNDL
AGVMALQRKLTGMERDLAAIEDKLADLGKEADRLASEHPEQSEAIKGRLAEITGVWDEMK
DTMKNREESLGEASKLQQFLRELDDFQSWLSRTQTAIASEDMPNTLTEAEKLLAQHEGIK
NEIRNYEEDYQKMRDMGEMVTQGQTDAQYMFLRQRLQALDTGWNELHKMWENRQNLLSQS
HAYQLFLRDTKQAEAFLNNQEYVLAHTEMASTLEGAEAAIKKQEDFMTTMDANEEKISAV
VDTGRRLVTDGNINAERIQEKVDSIDQRHKKNRAAANDLLMRLKDNRDLQKFLQDCQELS
LWINEKMLTAQDMSYDEARNLHSKWLKHQAFMAELQSNKEWLDKIDKDGQALMAEKPETE
AMVKEKLASLKTMWEDLESTTQTKAKCLFDANKAELFTQSCADLDKWLSSLEGQLQSDDY
GKDLTSVNILLKKQQILESQVEVRQKEVEELQSQSQALSQEGKGSEEVDGQRLSVETKFQ
FLQAPLMKRRDNLMASREIHQFNRDVEDEILWVEERMALATSTDHGHNLQTVQMLIKKNQ
TLQKEIQGHQPRYDDIFERSQHVLREDSPTAELIRQRLADLQSLWEQIRKETEKRHARLS
EAHKAQQYYFDAAEAEAWMSEQELYMMSEEKAKDEQSSVAMLKKHQILEQAVEDYADTVH
QLSSTSRGLVAAEHPDSERIGMRQSQVDKLYAGLKDLSEERRGKLDERFRLFQLNREVDD
LEQWIAEREVVAGSHELGQDYEHVTMLQERFREFARDTGNIGQERVDTVNRQADELINTG
HGDAATIAEWKDGLNEAWADLLELIDTRTQILAASYELHKFYHDAKEILNRILDKHKKLP
EELGRDQNTVETLQRMHTTFEHDIQALGTQVRQLQEDAVRLQSAYAGDKADDIQKREGEK
RKGEVLEAWKNLLEAAEGRRVKLVDTGDKFRFFSMVRDLMLWMEDVIRLIEAQENPRDVS
SVELLMNNHQGIKAEIDARNDSFTACIELGKALLARKHYASEEIKEKLLQLTDKRKDMID
KWEDRWEWLRLVLEVHQFSRDAGVAEAWLLGQEPYLSSREIGQNVDEVEKLIKRHEAFEK
SAATWEERFAALERLTTMELLEVRRAQEEEEKKRQPPPTEAQPGDAVDQPREGEPVSQNG
LPSDQESPRENVEGGEVVNGVSEPSPAGSPGASRKGKASQAATLPAKTQQEAPTSQLEGF
LHRKHEWEGHNKKASSRSWHNVYCVINQQEMGFYKDQKSASQGIPYHSEIPVSLKDAVCE
VALDYKKKKHVFKLKITDGNEYLFQAKDDEEMNTWISAISAAMSGDKSEVTPSSHSTPAP
AARAQTLPASVATAATVESSPGKREKDKEKRFSLFSKKK
NT seq
7140 nt
NT seq
+upstream
nt +downstream
nt
atggagcttcagagcgccaccagcggtctacctagtctgcccctttcccctggccctctc
tccccaaccatggactacgccggccccctgtccccgtcgtctgccggcccctctcacgcg
agcccaggccggggtccgagccccagcctcagccccatcagggggtcgagccccagcccc
ggtttctcgggccaggctgccttcaactacaaccagctggaggggaggtttaaacagctt
caagacgagcgtgaggccgtgcagaagaagactttcaccaaatgggtcaactctcacctg
tccagagtctcgtgccggatcaccgacctctacatggacctgcgggacggacgcatgctc
atcaaactgctggaggtcctctcaggagagagactgcccaaacccaccaagggccggatg
cgaatccactgtctggagaacgtggacaaggctctgcagttcctgaaggagcagagggtc
cacctggagaacatgggctctcatgacatcgtggacggaaaccaccgcctcaccttggga
ctcatctggaccatcatcctccgcttccagattcaggacatcagcgtggagacggaggac
aacaaggagaagaagtcggctaaagacgctctgctgctctggtgtcagatgaagacggca
ggatatccaaacgtcaacatccacaacttcaccaccagctggagggacgggatggccttc
aacgccctcatccacaaacacaggcccgacctgatcgacttcgacaagctgaagaaatca
aacgctcactacaacctgcagaacgccttcaacctggccgagcaacacctcggactgacc
aagctgctcgaccccgaggacatcagcgtggaccaccctgatgagaagtccatcatcacc
tacgtggtcacctactaccactacttctccaagatgaaggctctgaaggtggaggggaag
aggatcggcaaggtgttggacaacgccatcgagacggagaagatgatcgagaagtacgag
tctctggcctcggacctgctggagtggatcgagcagaccatcatcatcctcaacaacagg
aagttcgccaactctctggtgggcgtgcagcagcagctgcaggcgttcaacacgtaccgc
accgtggagaagccgccaaagttcacggagaaaggaaacctggaggtcctgctgttcacc
atccagagcaagatgagagccaacaaccagaaggtgtacacaccccgagaggggaagctc
atctccgacatcaacaaggcgtgggagcgtctggagaaggcggagcacgagcgggagctg
gctctgaggacggagctgattcgccaggagaagctggagcagctcgcccgacgcttcgac
cgcaaagccgccatgagggagacgtggctgagcgagaaccagaggctggtctcccaggat
aactttggatacgaccttcaggccgttgaagctgcgacaaagaaacatgaagcgatagag
acggacatcgcagcgtacgaggagcgcgttcaggcggtggttgccgtggcgaaggagcta
gaggcggagagttaccatgacatcaagcgcatcacggcgaggaaggacaacgtgatccgg
ctgtgggagtacctgctggagctgctgaaggagcggcggctccggctggagatgaacctc
ggcctgcagagagtcttccaggagatgctgtacatcatggactggatggacgagatgaag
atgctgctgctgtctcaggattatgggaaacatctgctgggggtggaggacctgctgcag
aaacacgctctggtggaggccgacatcgccatccaggccgaccgcgtccgcaacgtcaac
ggcaacgcgcagaagttcgccaacgacatggacggttataagccgtgcgatcctcagatc
atccgggaccgggtggctcacatggacttctgttaccaggagctgagtcagctggcggct
gagcggcgagctcgcctcgaggagtcgcgtcgcctctggaagttcttctgggaaatggcc
gaagaggagggctggatcagggagaaggagcagatcctgtcctccgaggattatgggaag
gacctgacgggggcgctgcgactgctgagtcagcacaaagccttcgaggacgagatgagc
gggcgagccgcccacctgcagcagaccatcaaacagggcgaggagctcgtggccaacaac
cacttcggagccgacaagataaaagaacggatccaggacatccaggagcagtgggcggct
ctcgagcgtctctccgccgtccgtaaagctcgtctgcaggaggcgtgtaaccagcaccag
ttccaggccgacgccgacgacatcgacacgtggatgctggacgtgctgcggatcgtctcc
agcgtggacgtcggccatgacgagttctccgctcaggctctggtgaagaagcacaaggac
gtggccgaggagatcggaagctaccggccggtcatcgacgctctgcacgagcagtctcgc
acgctgccgcctgagaaggccaactccgaggaggttcagaacaggctggcgggcatcgag
gagcgctataaggaggtggtggagctgacccggctcaggaaacaggcgctgcaggacgct
ctggcgctctacaggatgctgagcgaagcgaacgcctgcgaggtgtggatcgacgagaag
gagcagtggctcaacagcatggagatcccagagaaactggaggacctggaggtggtccag
caccggtttgagagtttggagccggagatgaacaatcaagcgtccagagttgccgtggtg
aaccaggttgccaggcaactgatccacagtggacatcccagtgagaaggagatcaaagcc
caacaagacaaactcaacaccagatggagtcagttcagagatctggtggaccagaagaaa
gactgcctgaactcagctcttggagtccagaactaccacctggagtgtaacgagaccaag
tcctggatcaaagagaagaccaaggtgatcgagtcgacccaggagctggggaacgacctg
gccggcgtcatggctctgcagaggaagctgacggggatggagcgcgacttggccgccatc
gaagacaagttggccgacctgggaaaagaggcggaccgtttggcctcagagcacccggaa
cagtctgaggccatcaagggacgtctggcggagatcaccggtgtctgggacgagatgaag
gacaccatgaagaaccgtgaggagtccctgggtgaggccagcaagctgcagcagttcttg
cgtgaactggacgacttccagtcatggctgtcgcggacacagaccgccatcgcctctgag
gatatgcccaacacgctcaccgaggccgagaagctgctggcccagcatgagggcatcaag
aacgaaatccgcaactacgaggaggactaccagaagatgcgggacatgggcgagatggtg
acgcagggccagacggacgcgcagtacatgttcctgcgacagcggctgcaggcgctcgac
actggctggaacgagctgcacaagatgtgggagaaccggcagaacctgctgtcccagtcc
cacgcttaccagctgttcctcagggacaccaagcaggccgaggccttcctcaacaaccag
gagtacgtcctcgcccacaccgagatggcgagcactctggagggagccgaggctgccatc
aagaagcaggaggacttcatgaccaccatggacgccaacgaggagaagatcagcgccgtg
gtcgacaccggccggcgcctggtaaccgatggcaacatcaacgccgagcgcatccaggag
aaggtggactccatcgaccagagacacaagaagaaccgagcagctgccaacgacctgctg
atgaggctcaaggacaacagagacctgcagaagttcctgcaggactgccaggagctgtcg
ctgtggatcaatgagaagatgctgacggctcaggacatgtcgtacgacgaggccaggaac
ctccacagcaagtggctcaaacaccaggccttcatggccgagctgcagtccaacaaggag
tggctggacaagatcgacaaggacggacaggcgctgatggcggagaaaccggagacggag
gccatggtcaaagagaagctggcgtccctgaagacgatgtgggaggacctcgagtcgacc
acccagaccaaagccaagtgtctgttcgacgccaacaaggccgagctgttcacccagagc
tgcgccgacctcgacaagtggctgtccagcctggagggtcagctgcagtctgacgactac
ggcaaagatctgacctccgtcaacatcctgctcaagaagcagcagatcctggagagccag
gtggaggtgcgtcagaaggaggtggaggagctgcagagccagtcgcaggccctcagtcag
gagggcaaaggctcggaggaggtggacggccagcggctcagcgtggagaccaagttccag
ttcctccaggcgccgctgatgaagaggcgagacaacctgatggcgtcccgcgagatccac
cagttcaaccgcgacgtggaggacgagatcctctgggtcgaggagaggatggctctagca
acatcgaccgaccacgggcacaacctgcagactgtacagatgctcatcaagaagaaccag
actctgcagaaggagatccagggccatcagccgcgctacgacgacatcttcgagcgcagc
cagcacgtcctgagggaggacagcccgacggccgagctgattcgccagcggctcgccgac
ctccagtcgctatgggaacagatcaggaaggagaccgagaagcgccacgcccgcctgagc
gaggcccacaaggcccagcagtactacttcgacgccgccgaggccgaggcctggatgagc
gaacaggagctctatatgatgtcagaggagaaggccaaggacgagcagagttcggtagcc
atgctgaagaagcatcagatcctggagcaggcggtggaggactacgccgacaccgtccac
cagctgtccagcaccagccggggcctggtggccgccgaacaccccgacagcgagcgcatc
gggatgcgtcagtctcaggtggataaactttacgccgggctgaaggatttgtcggaggag
cgtcgggggaagttggacgagcgtttccgtctcttccagctcaaccgggaggtcgacgac
ctggagcagtggatcgccgagcgggaggtggtggccggatctcacgagctgggacaggac
tacgaacacgtcaccatgctgcaggagcgcttcagagaatttgcccgtgacaccgggaac
atcggccaggagcgcgtggacaccgtcaaccgtcaggcagacgagctgatcaacaccggc
cacggcgacgccgccaccatcgcggagtggaaagacggcctgaacgaggcctgggccgac
ctgctggagctcatcgacacccggacgcagatcctcgccgcctcctacgaactccacaag
ttctaccacgacgccaaggagatcctcaaccgcatcctggacaaacacaagaagcttcca
gaggagctgggccgggaccagaacaccgtggagaccctgcagaggatgcacaccaccttc
gaacacgacattcaagcactgggaacacaggtgcggcagcttcaggaggacgcggtccgc
ctgcagtctgcttacgctggagacaaagctgacgacattcagaagagagaaggcgagaag
agaaagggagaggtcctcgaggcctggaagaatctgctggaggcggcggagggccgccgg
gtgaagctggtggacaccggagacaagttccgcttcttcagcatggtgcgggatctgatg
ctgtggatggaggacgtcatccgcctgatcgaggcccaggagaaccccagagacgtgtcg
tcggtggagctgctgatgaacaaccaccagggcatcaaggcggagatcgacgcccgcaac
gacagcttcaccgcctgcatcgagctcggcaaagctctgctggccaggaagcactacgct
tcagaggagattaaagaaaagttgttgcagttgacggacaagaggaaagacatgattgac
aagtgggaggacagatgggagtggcttcgactggtcctggaggtgcaccagttctcccgg
gacgcaggtgtggccgaggcgtggctgctgggtcaggagccgtacctgtccagccgggag
atcgggcagaacgtggacgaggtggagaaactcatcaaacgccacgaggccttcgagaag
tcggccgccacctgggaggaacgcttcgccgctctggagaggctgaccacgatggagtta
ttggaagtgagaagagcacaagaggaagaagagaagaagagacaacctccgcccactgag
gctcagccaggcgacgctgtagatcagccaagggagggtgagccggtgtctcagaacggg
ctgccgtccgatcaggagtctcccagggagaacgttgaagggggtgaggttgtgaacggg
gtgtcggagcccagtcccgcggggtctcccggggcgtctcgtaagggcaaggccagccag
gcagcgaccctgccggccaagacccaacaggaagcccccacgtcccagctggagggcttc
ctgcaccgcaaacacgagtgggaagggcataacaagaaggcttcaagcaggtcgtggcac
aatgtgtactgtgtgatcaaccagcaggagatgggtttctataaggatcagaagagcgcc
agtcagggtatcccctaccacagcgagattccagtcagcctgaaggacgccgtctgcgag
gtggcactggactacaagaagaagaaacacgtcttcaagctcaagattactgacgggaac
gagtatctcttccaagccaaagatgacgaggagatgaacacgtggatctcggccatctcg
gccgccatgtcgggcgacaaatcggaggtcacccccagcagccatagcacgcccgcccct
gccgcacgcgctcagacgctgcccgcctccgtcgccacggcagcaaccgtcgagtccagc
ccgggcaaacgagagaaagacaaggagaagcgcttcagtctgttcagcaagaagaaatag
DBGET
integrated database retrieval system
