Larimichthys crocea (large yellow croaker): 104931805
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Entry
104931805 CDS
T04659
Symbol
trim71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lco03019
]
104931805 (trim71)
04121 Ubiquitin system [BR:
lco04121
]
104931805 (trim71)
Enzymes [BR:
lco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104931805 (trim71)
Messenger RNA biogenesis [BR:
lco03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104931805 (trim71)
Ubiquitin system [BR:
lco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
104931805 (trim71)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
zf-B_box
SGL
ANCHR-like_BBOX
TEN_NHL
zf-RING_5
zf-C3HC4
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
104931805
NCBI-ProteinID:
XP_010745194
UniProt:
A0A0F8ACM3
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Position
XIII:complement(2030607..2059140)
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AA seq
831 aa
AA seq
DB search
MASFPDSDLQTCPLCKELCGSSAPISSSSSTSSSSSHTSTSSSQTTRRLHVLPCLHAFCR
QCLEGQRSPGDPLKLRCPTCDQKVSISEAGVDSLPSSNFLFSNLLDVVVSSEEQIQNKNG
HHHHRSGIGGGSSGFHHSHGGLLHPHHLGEPQCSSCDEENPATSHCLDCQEYLCDNCVRA
HQRVRLTKDHFIECLGDNLHLGRVNANSNSGQPGVSVSLAQSLQNNFALLSLFQDRMSFC
QHHDNEVFLFFCETCSVPICRECSVGRHMGHTFVYLQDAVQDCRAITIQLLADAQQGRQA
VQLSMEKVQAMAEQVEIKAKVVQTEVKALVLRHKKALEERECELLWKVEKIRQVKAKSLY
LQVEKLHQSLTKLDSTIAAVSQVLDEGHHLDVLLARERMLTQIHELKALRGLLQPQEDDR
FMFTPPDQALYIAVQSMGLISSGAFAPVTKAHGEGLKTALRGKPASFTVIGYDHDGEPRL
SGGDAVSAVVMSATDGSLSAAEVTDHQNGSYTVSYLPKCEGEHLVSALVCNQHIQGSPFK
VMVKSRRSYGSLGTQVSSFGCEGEGDGQLCRPWGISVDKEGYVVVADRSNNRIQIFKPCG
AFHHKFGSLGSRPGQFDRPAGVACDSQRRIIVADKDNHRVQVFTFEGQFLLKFGEKGTKN
GQFNYPWDVAVNSEGKILVSDTRNHRVQLFAPDGSFLNKYGFEGALWKHFDSPRGVAFNH
EDHLVVTDFNNHRLLVIRPDCQSARFLGSEGTGNGQFLRPQGVAVDQENRIIVADSRNHR
VQVFEPNGNFLCKFGTQGSGFGQMDRPSGVAVTPDGVIVVVDFGNNRILKF
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgtttccagactcggacctgcagacgtgtccgctctgcaaagagctctgcggc
tcctctgctcctatttcctccagctcttctacctcctcatcttcctcgcatacctcgacg
tcctccagccagaccaccagaaggctccacgtcctgccctgcctccatgccttctgcagg
cagtgcctggagggtcagcgaagtcctggggacccgctgaaactgcgttgccccacctgc
gaccagaaggtgtccatctctgaagccggcgtggactccctgccttcctccaacttcctc
ttcagcaacctgctggacgtggtggtgagctccgaggagcagatccagaacaagaacggc
caccaccaccatcgaagtggcatcggcggaggctcctcgggcttccatcattctcacgga
ggcctgctgcaccctcaccacctgggagagcctcagtgcagctcctgcgacgaggagaac
ccagctacctcccactgccttgactgccaggagtatctgtgcgacaactgtgtgcgggca
caccagcgggtgcggctgaccaaggaccacttcatcgagtgcctgggagacaacctccac
ctgggccgggtcaacgccaacagcaactcgggacagccgggggtgtcggtgtctctcgcg
cagtccctgcagaacaactttgccctgctgtccctgttccaggatcgcatgagcttctgc
caacaccacgacaatgaggtgttcctgttcttctgtgaaacctgctcggtgcctatctgc
agggagtgcagcgtgggccgacatatgggccacaccttcgtttatctacaagacgccgta
caggactgcagggccatcaccatccagctgctggcagatgcacagcagggacgacaggcc
gtgcagctaagcatggagaaggtccaggccatggcggagcaagtggagatcaaagccaag
gtggtgcagactgaagtaaaggccctcgtcctccgacacaagaaagcgctggaggagagg
gagtgtgaactactgtggaaggtggagaagatccgtcaggtgaaggccaagtctctgtac
ctgcaggtggagaaactgcatcagagtttgaccaagttggacagcaccatcgctgcggtt
agccaggtgctggacgagggccaccaccttgacgtgctgctggccagggagcgaatgctc
acccagatccatgaactcaaggctctgaggggcctgctgcagccgcaggaggacgaccgc
ttcatgttcactcctccagaccaggctctctacatagccgtccagtcaatggggctcatc
agcagtggtgcctttgccccggtcactaaagcccacggtgagggcctaaaaactgcgctt
cgcggtaagccggcctcattcactgtgatcggatatgaccatgacggcgagccacgtctt
tccggcggggacgcagtgtccgctgtagtcatgtcggccacagatggcagcctgtctgca
gcggaggtaacggaccaccagaatggctcgtacaccgtcagctacctgcctaaatgtgag
ggggagcacctcgtgtcagcgttggtgtgtaaccagcacatccagggcagcccgttcaag
gtgatggtgaagtccaggcggagctacggctccctgggcacccaggtgtcatcattcggg
tgcgagggggagggagatggtcagctgtgtcgtccatggggcatcagcgtggacaaggag
ggatacgtagtggtggccgatcgcagcaacaaccgcatacagatattcaagccttgtggt
gccttccaccataagtttggctctctgggttcccggcctggtcagtttgatcgtccagca
ggggttgcatgtgacagtcagagacgaatcattgtggctgataaggacaatcaccgtgtg
caggtgtttacttttgagggccagttcctgctgaagtttggggaaaagggtaccaagaat
gggcagttcaactatccctgggatgtggctgtcaactctgagggtaagatcctggtctca
gacaccaggaaccaccgcgtgcagctgtttgcccctgacggctctttcctcaacaagtac
ggcttcgaaggggccctgtggaaacactttgactctcccagaggagtggcctttaaccac
gaagaccacctggtggtgaccgacttcaacaaccaccggctcttggtcatcaggccggac
tgccagtcggctcgctttctgggctctgagggcaccgggaacgggcagtttctgcggcct
cagggcgtcgcagtggaccaggagaaccgcatcatcgtggcagactcccgcaaccatcga
gtccaagtgtttgagcccaatggaaactttttatgcaaatttggcacacaggggagtggc
tttggacagatggatcgcccctccggtgtggctgtgacgcctgacggagtcattgtggtg
gttgactttggaaataatcgcatcctcaagttctaa
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