Larimichthys crocea (large yellow croaker): 104931961
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Entry
104931961 CDS
T04659
Name
(RefSeq) signal transducer and activator of transcription 1-alpha/beta isoform X1
KO
K11221
signal transducer and activator of transcription 2
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04217
Necroptosis
lco04620
Toll-like receptor signaling pathway
lco04621
NOD-like receptor signaling pathway
lco04625
C-type lectin receptor signaling pathway
lco05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
104931961
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
104931961
04621 NOD-like receptor signaling pathway
104931961
04625 C-type lectin receptor signaling pathway
104931961
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
104931961
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lco03000
]
104931961
Transcription factors [BR:
lco03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
STAT
104931961
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
STAT_alpha
STAT_bind
STAT_int
STAT_linker
SH2
Mesd
DUF4840
EF-hand_12
Phage_sheath_1C
Motif
Other DBs
NCBI-GeneID:
104931961
NCBI-ProteinID:
XP_010745391
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Position
VI:complement(8540009..8553271)
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AA seq
800 aa
AA seq
DB search
MAQWEKLRQLPAVYGQQLHELYDRDALPMDVRHYLSAWIEKQEWQRAARDHDLAMVLFQV
LLENLDIQHSRFVQEESFLLQHNIRRYKQNFQRYLDDPCALASTILWFLEKEKEILRSAD
LAEQVQFLRVEQEAMETSSQQDLERKMAGLKNEVQCMEHTMLCLEEQQDEFDFKYQTHKM
EAAVVDEAEKQEKIKLFQLLINRLNDCRKSTLADLNKLLDKIEELNDMLVKKELVEWQRR
QQKACIGAPDNVCLDQLENWFTCVAVCLFQVREFLSKLEELVGKLSYANDPVKAQKPALQ
SRTDTLLEDLLKSSFVVETQPSMPQGKGPLVLRTNVQFSVKTRLLVKVPELNHSMKVNVS
MDREAPQMKGYRRFNVLGSKTKALNMAESQSGGMVADFRHLTLKEQKSGGGKGVSDISLS
VTEELHLIYFDTVFEFKGLSVELQACSLPVIIISNSSQQQSAWASVLWFNMISLDTKDVM
FFANCPAATWPQFGEMLSWQFLSATKRGLNDAQLEMIAHRLFGKKQDYGTCKVAWSKFSK
ENPPDTFWVWFDGILVMVKTYLENLWRDGHIMGFVNKSKEKSLLKKKQRGTFLLRFSESV
IGAITFSWVDTTITGEPDIKTVQPFTKVDLSQIPFHEIIRNFQILEAENIPENPLVYLYP
NTPKDEAFGKYYTEKTGSDSPYIKYIKTKLMFVSKENTLEAKSPMPSDMAQGEALEPING
LCEEAAEQNEDPQTLTSPLEMYHPDPMLSSSVAGPEEDLLMYLNNPNLFADIMQEEPALP
DYSLQAFHGLPVQSCGSIFQ
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atggcacagtgggagaaactgaggcagctacctgctgtctatggacagcagctccacgag
ctctacgacagggatgctttgcctatggatgtgcggcactacctgtcagcctggatagag
aagcaggagtggcaacgagcagcccgggaccatgatttggctatggtgctgttccaggtc
ctgctggagaatctggatatccaacacagccgttttgtgcaggaggagtcgttcttactg
cagcacaacatcagacgttataaacagaactttcagaggtacctggatgacccgtgtgcc
ttggcaagcacaatcctgtggtttttggaaaaagagaaagaaatcctccggagcgctgat
ctggccgagcaggtccagtttttgcgtgttgagcaggaagccatggagaccagcagtcag
caggaccttgaacgtaaaatggctggcctcaagaacgaagtgcagtgcatggagcataca
atgttatgtctggaggagcagcaagatgagtttgattttaaataccagactcacaagatg
gaagcagctgtggttgacgaggcagagaagcaagaaaaaatcaaactctttcagttactt
atcaacagactgaatgactgtcgaaagagcacgctggcagacctaaataagctgctggat
aaaattgaggaactgaacgacatgctggtgaagaaggaactggtggagtggcagaggagg
cagcagaaagcttgcattggtgctccagacaatgtttgcctggatcagctcgagaactgg
ttcacctgtgttgcagtgtgtctgttccaggtgcgggagtttcttagtaagctggaggag
ctggttggaaaattgtcctatgccaatgaccctgtgaaggcccaaaaaccggcactgcag
agcagaacagatactcttttagaagacttactcaagagttccttcgtggttgagactcag
ccctccatgcctcaggggaaaggacccctggtactccgcacaaacgtccagttctctgtc
aagaccagacttctcgttaaagttcctgagctgaaccactccatgaaagtgaatgtgtcc
atggacagggaggctcctcagatgaaaggatatcgacgctttaatgttctgggctctaaa
accaaggctttgaacatggcagagagccagagtggaggcatggtggcagacttcagacat
ctgactctgaaggagcagaagtctggaggtggcaaaggagtgagtgatatttctctcagt
gttacggaggagctgcatctcatctactttgacactgtatttgagtttaaaggcttgtca
gttgagctgcaggcctgctccctcccggtgatcatcatctccaactccagccagcagcag
agtgcctgggcttctgtcctttggttcaacatgatcagtctggacacaaaggatgtcatg
ttcttcgccaactgtcctgcagccacttggccgcagtttggagaaatgttgagctggcag
tttctctctgccactaaacgcggtctgaatgatgctcagttggagatgattgcacacaga
ctctttggaaagaaacaggactatggcacctgtaaagtagcttggtcgaaattcagcaag
gaaaatcctcctgacacattctgggtgtggttcgatggcattttggtgatggtgaaaaca
taccttgaaaacctgtggagggatggtcacatcatgggttttgtgaacaaatccaaagag
aagtcactcctgaagaaaaaacagagaggcacgttcttgttgcgcttcagtgaaagtgtc
atcggagcaatcaccttctcttgggtggacaccactataactggtgaacctgacataaag
acagtgcagcccttcaccaaagtcgacctctcccagattcccttccatgaaatcatcagg
aatttccagatcttagaggctgaaaacattccagaaaatcctctagtttacctttatccc
aacacccccaaagatgaggctttcgggaaatactacactgagaagactggaagtgacagt
ccttacatcaagtacatcaaaaccaagctgatgtttgtttcaaaggagaacacactggag
gctaagtcacccatgccctctgacatggcacagggtgaggccctggagccaatcaatggc
ctgtgtgaggaggcagctgaacaaaacgaggatcctcaaactttgacttcgcctctggag
atgtatcaccctgatcccatgctgtccagctctgtcgccggcccagaggaagatttactg
atgtatctcaacaaccccaacctctttgctgacatcatgcaagaagagccggcgctgcct
gattacagtcttcaagcatttcatggcctgcctgtacaatcctgtggaagcattttccaa
taa
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