Larimichthys crocea (large yellow croaker): 104932088
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Entry
104932088 CDS
T04659
Symbol
wipi2
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 2 isoform X1
KO
K17908
autophagy-related protein 18
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04136
Autophagy - other
lco04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
104932088 (wipi2)
04136 Autophagy - other
104932088 (wipi2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lco04131
]
104932088 (wipi2)
03029 Mitochondrial biogenesis [BR:
lco03029
]
104932088 (wipi2)
Membrane trafficking [BR:
lco04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
104932088 (wipi2)
Mitochondrial biogenesis [BR:
lco03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
104932088 (wipi2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
WD40_WDHD1_1st
WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_RSE1_2nd
DUF7165
Beta-prop_Vps41
Beta-prop_TEP1_2nd
BCAS3_WD40
Beta-prop_IFT140_1st
VID27
Motif
Other DBs
NCBI-GeneID:
104932088
NCBI-ProteinID:
XP_027141472
LinkDB
All DBs
Position
XII:2285252..2291773
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AA seq
427 aa
AA seq
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MNLASQSGEAGGSQLLFANFNQDNTSLAVGTKSGYKFFSLSSVDKLEQIYECTDTEDVCI
VERLFSSSLVAIVSLKAPRKLKVCHFKKGTEICNYSYSNTILAVKLNRQRLIVCLEESLY
IHNIRDMKVLHTIRETPPNPSGLCALSISNDNCYLAYPGSATIGEVQVFDTVNLRAANMI
PAHDSPLAALAFDASGTKLATASEKGTVIRVFSIPEGLKLFEFRRGVKRCVSICSLAFSM
EGLYLSASSNTETVHIFKLETQEKKYVPAEEPTTWGGYLGKVLMASTTYLPSQVTEMFTQ
GRAFATVRLPFCGHKNICALAVIQKIPRLLVAAADGYLYLYNLDPQEGGECTLMKQHRLD
GSAEPSNEILEQGSHDHPLVAQTYSAAVTKGYCEEQGAVGGAGLEDDLNDLRLEEENEQP
PLILETD
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgaacttggccagtcagagcggggaagctggcggaagccagctcctcttcgccaacttt
aaccaggacaacacgtctttagctgttggcaccaaatcaggatacaagtttttctccctg
tcctctgtggacaaactggagcagatatatgaatgtacggacacggaggatgtgtgtatc
gtggagcgtctgttctccagcagtctggtcgccatcgtcagcctgaaggccccgaggaag
ctcaaagtctgtcatttcaagaagggaacagagatctgcaactactcctattccaacacc
atactggccgtcaagctcaacagacagaggctgatcgtgtgtctggaggagtcgctttac
attcacaacatccgagacatgaaagtgctgcacactatcagagaaactccacccaaccct
tcaggactgtgcgctctgtccatcagcaatgacaactgttatctggcgtaccccggcagt
gccacgataggagaagttcaagtgtttgacacggttaacctgcgagcggctaacatgatt
ccagcccacgacagcccgttggcggctctggcatttgacgccagtggaaccaaactggcc
accgcctcggagaaaggaacagtcattcgtgtcttctcgatcccggagggactgaagctc
tttgagtttcgaagaggagtcaagaggtgtgtgagcatctgctcgctggcgttcagcatg
gaaggcctctacctgtcggcctccagcaacacagagacggtccacatcttcaaattagag
acgcaggagaagaagtatgtgccagcagaggagcccaccacatggggagggtacctgggc
aaagtcctgatggcgtccaccacctacctgccttcccaggttacagaaatgttcacacag
ggtcgagccttcgccaccgtacgtctgcctttctgcggacacaagaacatctgcgcctta
gctgttattcagaagattcccaggttgttggtggcagcagctgatggttacctgtacctg
tacaacctggatccacaagagggaggggagtgcacacttatgaagcagcacaggttagac
ggcagtgccgagccatccaatgagatccttgagcaggggtcacatgaccacccacttgtg
gctcagacctacagtgctgcagtaactaaaggttactgcgaagagcagggcgccgtcgga
ggggcgggtctagaagacgacctcaacgacttgcgcctggaggaggagaacgagcagccg
ccgctcatcctggaaaccgactga
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