Larimichthys crocea (large yellow croaker): 104932089
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Entry
104932089 CDS
T04659
Symbol
ap5z1
Name
(RefSeq) AP-5 complex subunit zeta-1 isoform X1
KO
K19025
AP-5 complex subunit zeta-1
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lco03400
]
104932089 (ap5z1)
DNA repair and recombination proteins [BR:
lco03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
104932089 (ap5z1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TPR_AP5Z1_C
TPR_AP5Z1
SPG48
Motif
Other DBs
NCBI-GeneID:
104932089
NCBI-ProteinID:
XP_019112829
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Position
XII:2262646..2271427
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AA seq
820 aa
AA seq
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MFSHGSESLIKQAREIQESELQKFYSRLVKLLQAKELSHETVDSLQRLHLILSATKYTRT
LPPELQKRLLSLLSSPSEQLQVLGSAVLRETLPLSGQELNYNQENVSQLNSHAAALLLSQ
ARSTADLSSLCAQLLRGLESRQSDGSAHSLTHTLPVLNTVLTHRPECLTEDHITLLSKKL
VDWLRYASITQGGCASSGGFFTGPRSRQPVPIAELDGTVSGDFFTVLCVGQSFTDDQWMN
VYSFSMLRHWLLTYHSVSNSNTTADTANRLQLSLSLSHSHSFSNDDRSEVDGSVVSMVSA
TSSSSRLLPPKERLREKAFQYCQRLIEQSDRKAHKKADADLQKACLVEAVCILDCVCVED
ASLVFRTFPCIKALFGRLSSDLSFARVLLPIAQFYLNHGEMAAVDCECVWRLVFARFPSE
LFNDQFLAHELLRFLRLNLESLQLRVPQYIRSFPNLLKLLAWDSPALMDDFVDLLPSLVT
AGTAVELLHTLLDLPCLSATLVLQHRSAALPIAESSARGLLSLDAFRSPSFRGLFLFLLR
GEAGSGDTIDRLNTLHELLAEAADWPRVVQCAQSVPVLLHIFFNTVITIADEKLLAHLIL
VMLERSSLLLNIPKYITETHRVFSCHLLKFCKLHPSLVVDQSHELLEFAGATANVYSKEE
IYTHVVWVLGEYLSVSCDSRCSVKLITSCFEALEAVLFEITSSAPPPGAVCPAPRVVTTL
MSALAKLASRSHDLIPRVSLFLSKLRTVTRGGSVAWCSDEDDLVAIVTRGEELWSLLKSP
GVAQSVLTPPQHVMTPQWHRDTNVATPLRLRALTNLTQSQ
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgttttctcacggctcagagagtttgatcaaacaagcgagggagatccaggagtctgag
ctgcagaagttttacagcagactggtgaagctgctccaggcgaaggagctcagccatgag
actgtggactcccttcagaggctgcacctcattctgtccgccaccaagtacacccggacg
ttgcctcctgagcttcagaagagactcctgtcgctcctctcgtcgccctcggagcagctc
caggttctgggctcggctgtgctcagagagacgctgcccctctctggtcaggagctgaac
tacaaccaggagaacgtcagccagctgaacagccacgccgccgccctgctgctctcacag
gcgagatcgacggccgacctgtcgtctctctgcgctcagctgctgcgcggcctggaaagc
cgacaatcggacgggtcagctcactcgctcacacacaccctgcccgtccttaacaccgtc
ctcacacaccgccccgagtgcctcactgaagatcacatcaccctcctgagtaaaaagctc
gtggactggctgcgttatgcgagcatcactcagggtggatgtgcctcctctggagggttc
ttcacggggccgaggtcacgtcagccggtgcccatagccgagctggacgggacggtgtcc
ggggatttcttcaccgtgctgtgtgtgggtcagagcttcaccgatgaccagtggatgaac
gtctactccttctcgatgctccgccactggcttctcacctaccactctgtttccaatagc
aacaccacagcggacaccgcaaacaggctgcagctcagcctctccctctcccactcccac
tccttttctaatgatgaccgctcggaggtggacgggtcggtggtttctatggtttcagcc
acttcctcctccagccgattgctgcctccgaaggagcgtctgagagagaaggcgttccag
tactgccaacggctcatcgagcagagcgatcgcaaggcgcacaaaaaggcagatgcagac
ctgcagaaagcgtgtctggtggaggcggtgtgtatcctggactgcgtgtgcgtcgaggac
gcctcgctggtcttccgaacgttcccgtgcatcaaggcgctcttcggtcgtctcagctca
gatctgtcgtttgccagagtcctgctgcctatcgcacagttctacctcaaccatggtgag
atggctgccgtggattgtgagtgcgtgtggaggctggtgtttgctcgattcccttccgag
ctcttcaacgatcagttcctggcacacgagcttcttcgcttcctccggctgaacctcgag
agtctgcagctgcgggtcccgcagtacatccgctccttcccgaacctgctgaagttgttg
gcgtgggacagcccggcgctgatggatgactttgtggatctgctgccctctctggtcaca
gctggaactgcagtggagctcctccacactctgctggacctgccctgtctctctgccact
ctggttttacaacacaggtcagctgctttgcccatcgctgagtccagtgcccgtggcctc
ctgtcactcgatgcatttcgaagcccttctttccgaggacttttcctcttcttgcttcga
ggcgaagcaggttcaggcgacacaatcgaccggctgaacacgctccacgagctgctggcc
gaggctgccgattggccgagagtcgtccagtgtgcgcagagcgtccctgtgctgttgcac
atttttttcaacacagtcatcacgatagctgacgagaagcttttagctcacctgattctg
gtgatgctggaaagaagcagcctcctcctcaacatcccgaaatacatcacagagacacac
agggtgttcagctgccacctgctgaagttctgtaagctccacccgtctcttgtggtggac
cagtctcacgagctgctggagttcgccggagccaccgccaacgtctacagcaaagaggaa
atctacacgcacgtggtgtgggtgctgggagagtatctctctgtgtcatgtgactctcgc
tgctccgtgaagctcatcacttcctgtttcgaggcgctggaggcggtgctgtttgagatc
acttcatccgctccaccacccggagccgtttgccctgcgccgagagtcgtcaccactctg
atgagcgctctggctaagctggcgtcacgatcacatgacctcatacccagggtgtctctc
ttcctctccaagctaagaacggtaacccgaggcggctcagtcgcctggtgctccgatgag
gacgacctcgttgccatagtgacgcgaggtgaggagctgtggtcgctgctgaagagcccc
ggtgtggctcagagcgtcctgaccccgcctcaacatgtcatgacaccccagtggcacaga
gacaccaacgtggccacgccgcttcgactgcgagccctcaccaacctcacacaatcacag
tga
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