Larimichthys crocea (large yellow croaker): 104932175
Help
Entry
104932175 CDS
T04659
Symbol
hnrnpa1
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1 isoform X1
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104932175 (hnrnpa1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lco03019
]
104932175 (hnrnpa1)
03041 Spliceosome [BR:
lco03041
]
104932175 (hnrnpa1)
Messenger RNA biogenesis [BR:
lco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
104932175 (hnrnpa1)
mRNA cycle factors
Common to processing body (P body) and stress granule
104932175 (hnrnpa1)
Spliceosome [BR:
lco03041
]
Common components
Common spliceosomal components
hnRNP proteins
104932175 (hnrnpa1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
RBD_AKAP-17A
RRM_3
Motif
Other DBs
NCBI-GeneID:
104932175
NCBI-ProteinID:
XP_010745649
LinkDB
All DBs
Position
XV:complement(15685555..15689361)
Genome browser
AA seq
333 aa
AA seq
DB search
MSKDVPREPEQLRKLFIGGLSFETTDESLRAHFEQWGGLTDCVVMRDPNTKRSRGFGFVT
YSSVQEVDAAMSARPHKVDGRVVEPKRAVSREDSNRPGAHVTVKKIFVGGIKEDTEESHL
RDYFQQFGKIEVIDIMTDRNTGKKRGFAFVTFDDHDSVDRIVIQKYHTINSHNCEVRKAL
TRQEMQTSGMGMRGRSSGGRPYDYDRGFNQGGRGRYGDGPYNCNGGDGGYGGGPGGPGGY
NNGGNRGYNQGYNQGGGGGGGGYGGNGYDSNGYGNCGGGGGGGNNYNSMGHYDPQASNFG
PMKNNFGGGGGGRNFGGYGNGSNSGGYGRPGRF
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaagacgtcccacgcgagccagagcagctccgcaagctgttcattgggggattg
agtttcgagaccacagatgaaagcctgcgggctcattttgagcaatgggggggccttaca
gactgtgtggtcatgagggatcccaacaccaagagatccaggggctttggttttgttacg
tattcatcagtgcaagaggttgatgctgccatgtctgcccgcccccacaaggttgatgga
agagtcgttgaacctaagcgtgctgtttctagagaggactcaaaccggccaggtgcccat
gtaactgttaaaaagatctttgttggaggaatcaaggaagatacagaggagtctcacctg
cgagattacttccagcagttcggcaaaatcgaggttattgatatcatgactgaccgcaac
actggaaagaagaggggctttgcttttgtgacctttgatgaccatgattcagtggacagg
attgtcatccagaagtaccacacaatcaactctcacaactgcgaagtgaggaaggccctg
acaaggcaggaaatgcagacttcgggtatgggaatgagaggtcgcagcagtggtggaagg
ccttatgactacgacagaggcttcaaccaaggtggcagaggaaggtatggagatggtcct
tacaactgcaatggaggtgatggtggttatggaggtggtcccggtggtcctggtggctat
aataatggcggtaaccgtggatataaccagggttacaaccagggtggtggaggcggtggt
ggcggctatggaggaaatggttatgacagcaatggctatggtaactgcggcggcggtggt
ggtggcggaaataactacaacagcatgggccactacgacccccaggcgtccaactttggc
ccgatgaagaacaactttggcggcggcggtggcggcaggaacttcggtggctatggaaat
ggctccaacagtggtggatatggccgtcccggacgattttga
DBGET
integrated database retrieval system
