Larimichthys crocea (large yellow croaker): 104932274
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Entry
104932274 CDS
T04659
Symbol
syvn1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04120
Ubiquitin mediated proteolysis
lco04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104932274 (syvn1)
04120 Ubiquitin mediated proteolysis
104932274 (syvn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lco04121
]
104932274 (syvn1)
Enzymes [BR:
lco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104932274 (syvn1)
Ubiquitin system [BR:
lco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104932274 (syvn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-ANAPC11
zf-RING-like
zf-HC5HC2H
zf-Nse
FANCL_C
Motif
Other DBs
NCBI-GeneID:
104932274
NCBI-ProteinID:
XP_019111484
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All DBs
Position
I:42709358..42717310
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AA seq
626 aa
AA seq
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MVRAALVTATSLALTGAVVAHAYLLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWLFHMRVLSLMGLLGVLDFLFVNHACHSIITRGASVQLVFGFEYAI
LLTMVLTTFIKYLLHTIDLQSENPWDNKAVYMLYTELFTGFIKVLLYIAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEDLQASDNVCIICREEMVT
GAKKLPCNHIFHSSCLRSWFQRQQTCPTCRMDVLRASNNNQTPAPAQAPPPAPAAPANAP
AAPPANVAPGMLPGFPPGIFPFWGPFPAVPPPPAAAVAAPGGTDAPQSSTEATQTAASSQ
PTSSTADAAAAAPGTGLPGFPFSFPPPPFPTAPWLPMPPPPPFVSSMPPPPPSLSRLSEE
ELRELEAEGRRGLEARLQCLQNIHTLLDAAMLNIHHYLSTVATLAPPRAEASGTNHTASS
AAAGSSTDSASQATDSASSEQATVSSQPADSTSAASDTERQELPDEGVVVGEEDGEPNAA
ELRRRRLRKLETATTSSSSSSPPPDN
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggtacgagcagcgttggtgactgccaccagtctggctttgactggggctgtggtggcg
catgcttacctcctcaaacaccagttctacccgactgtggtctacctcaccaagagcagc
cccagcatggcggtgttgtacattcaggcgtttgtgttggtgtttctgctgggaaagttc
atgaggaaggtcttttttggacagctaagagctgcagaaatggagcatctcattgaacgc
tcctggtacgcagtgacggagacgtgcctggctttcactgtgttcagagatgacttctcc
ccccgctttgtcgccctcttcaccctcctgctcttccttaagtgcttccactggctggct
gaggaccgtgtagactttatggaacggagtccaaacatatcttggctttttcacatgaga
gtgttatctctcatgggactcctgggtgtcctggacttcctgtttgttaaccatgcctgt
cacagcatcattacccgaggagcctcggtccagctcgtttttggatttgagtatgccatc
ctgctgaccatggtgctgacgaccttcattaaataccttctgcacacgatcgacctgcag
agtgagaatccgtgggacaacaaggcggtttatatgctctacactgagctcttcacaggt
ttcatcaaagtgctcctgtacatcgccttcatgaccatcatgataaaggtccacaccttc
cccctgtttgccattcggcccatgtatctggctatgaggcagttcaagaaagctgtgacg
gatgctataatgtctcggagagccatccgcaacatgaatacgctataccccgatgctact
cctgaagacctgcaggcctctgacaacgtctgcatcatctgtcgagaggaaatggtcact
ggagccaagaaactgccgtgtaatcacattttccactccagctgtctgcgttcctggttc
cagaggcaacagacttgtcctacctgtcgcatggacgtccttcgggcgtctaataacaat
cagactccagcaccggcgcaggcaccgccccctgctccggcagcccccgccaacgctcct
gcagccccaccggccaatgtggctccaggcatgttacctggctttcctcccggcatcttc
ccattctggggtcccttccctgcagtgcctcctccccctgctgcagcagtggcagctccc
ggcggtacagacgctccacaaagcagcacagaggctacacagacggctgcttccagccag
cccacctcgtcgactgcagacgccgctgcagccgctccaggaacaggactcccaggtttc
cccttctccttccctcctccacccttccccactgcaccatggctgcccatgccaccacct
cctcccttcgtgtcatcgatgcctcctcctcctccgtctctgtcccggctgtcagaggag
gagctgagggagctggaggcagaaggccgacggggcctcgaggcccggctccagtgtctg
cagaacattcacaccctgctggacgccgccatgctcaacatccaccactacctcagcacc
gtcgccacacttgctcctcctcgggctgaggccagtgggacaaaccacactgcttcatct
gctgcggctggcagcagcacggacagcgccagccaggcgacggactctgccagctctgag
caggctacagtctcctctcagccagccgactctacatctgctgcctcggacacggaaaga
caagagctgcctgacgaaggagtggtggtcggggaggaagacggagagcccaacgctgct
gagctgaggcgccgtcgccttcgtaagctagagacggcgacaacatcatcttcatcatct
tcacccccgccagacaactga
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