Larimichthys crocea (large yellow croaker): 104932304
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Entry
104932304 CDS
T04659
Name
(RefSeq) calpain-1 catalytic subunit
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04141
Protein processing in endoplasmic reticulum
lco04210
Apoptosis
lco04217
Necroptosis
lco04218
Cellular senescence
lco04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104932304
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
104932304
04217 Necroptosis
104932304
04218 Cellular senescence
104932304
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
104932304
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lco01002
]
104932304
Enzymes [BR:
lco01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
104932304
Peptidases and inhibitors [BR:
lco01002
]
Cysteine peptidases
Family C2: calpain family
104932304
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GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_7
EF-hand_5
CAPN13-like_C_EFh
Ndufs5
Motif
Other DBs
NCBI-GeneID:
104932304
NCBI-ProteinID:
XP_019120226
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Position
XIV:10517196..10540666
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AA seq
705 aa
AA seq
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MEEPICATGMAARLRSQWDHDAGLGQNHNAVKFLGQDYERLKAQCLQSRKLFEDNLFPCA
ASSLGFDELGPRSAKTSGVRWMRPTEFCQRPEFIVDGATRTDICQGALGDCWLLAAIASL
TLNDNLLHRVVPHGQSFRQGYAGIFHFQFWQFGEWVEVVIDDRLPVKDGKLLFVHSAEGT
EFWSALLEKAYAKLNGCYEALSGGSTSEGFEDFTGGVTEMFELRKAPPDLYNIMSRAIER
GSLLGCSIDITNTRDMEAVTFKKLVKGHAYSVTAVDEVVYRGNMTKLVRIRNPWGEVEWT
GAWSDNSREWENVDRSVRGRLQNRSEDGEFWMSFSDFLREFSRLELCNLTADALQNSQMK
KWSSSLYQGEWRRGSTAGGCRNYPATFWLNPQFKLVLQHPDTPGKSDCSFLVGLMQKDRR
KKRREGKDMETIGFALYEVPNEFKGSSGVHLKRDFFLTHASSARSELFINLREVSSRLQL
PAGEYVIVPSTFEPHKEADFVLRVFSEKPADSEELDDDVIAELPTEPLLDESQIDAGFKN
LFRQLAGPDMEISIAELQTILNRIISKHKDLKTDGFTKEACRSMISLMDKDGSGKLGLSE
FHVLWEKIKRYLTIFRQFDLDKSGTMSSYEMRMALESAGFKLTNHLFQLIILRYTEADMT
VDFDNFVTCLVRLETMYNTFQTMDTDKDKVISLNFPQWITLTMFA
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcccatttgcgctacaggcatggccgccaggctgaggagccagtgggatcac
gatgcaggtctgggacagaaccacaacgccgtgaagtttctgggtcaggattatgagcgt
ctcaaagcccagtgcctccagagccggaaactgtttgaggataatctgttcccctgtgct
gcgtcatctctgggattcgacgagctcggcccgagatccgccaagacctccggagtccgc
tggatgaggcccacggagttctgccaacgcccggagttcatcgtggacggagctactcgc
acagacatctgtcagggcgctctaggggactgctggctgctggcagccatcgcgtcgctg
actttaaacgacaacctccttcaccgagtggttcctcatggacagagtttcaggcaggga
tatgccggcatctttcacttccagttctggcagtttggcgagtgggtggaggtggtgatc
gatgaccggctgccagtgaaggatgggaagctgctgttcgtccactcggcagagggcacc
gagttctggagcgcactgctggaaaaggcctacgctaagttgaacggctgttacgaggct
ctgtctggcggcagcacgtcagagggctttgaggacttcacaggcggcgtgacggagatg
ttcgagctgaggaaagccccgcctgacctctacaacatcatgagcagggccatagagagg
ggatctctgctgggctgctccatagacatcaccaacacaagagacatggaggccgtcaca
ttcaagaagctggtgaagggacacgcctactccgtgaccgctgtggacgaggtggtatac
agaggaaatatgaccaagctggttcgcatcaggaacccctggggggaagtggaatggacc
ggagcctggagtgacaactccagagagtgggaaaatgtggatcgctccgtcagaggtcgg
ctacaaaaccgcagcgaggatggagaattctggatgtcgttcagtgacttcctgcgcgag
ttcagccgcctggagctgtgcaacctgacggcagacgccctgcagaacagccagatgaag
aaatggagctcctcgctctatcagggagagtggaggaggggcagcactgccggaggctgc
aggaactacccagcgaccttttggctcaaccctcagttcaagcttgtgctgcagcacccg
gacacccccggcaaatcagactgcagcttcctggtcggtctcatgcagaaggaccgcagg
aagaaacggcgggagggcaaagacatggagaccatcgggtttgccctctatgaggttcca
aatgagttcaaaggcagctcaggcgttcacctgaagcgagattttttcctcacccacgcc
tccagcgcccgctcggagctcttcatcaacctgagagaggtcagctcgagattgcagctg
ccggccggggaatacgtgatcgtcccctccacgttcgagccgcacaaagaggccgacttt
gtcctcagggttttctcggagaagcccgccgactctgaggagcttgatgatgacgttata
gccgaacttccaacagagcctctgttggacgagagccagatcgacgcaggcttcaagaat
ctcttcagacagctggcggggccggacatggagatcagtatcgcagagctgcagaccata
ttgaacaggatcatcagcaaacataaagacctgaagacagacggcttcacaaaagaggcc
tgtcgcagtatgataagcctcatggacaaagacggcagtggaaagctcggcctgtcagag
ttccatgtcctctgggaaaagattaaacgatacctgactatattcaggcagttcgacttg
gacaaatcgggcaccatgagctcctatgagatgaggatggctcttgagtctgcaggtttc
aagttgaccaaccacctgttccagctgatcatcctgcgctacacggaggccgacatgact
gtcgactttgacaactttgtcacctgcctggtcaggctggagaccatgtacaataccttt
cagaccatggacacggacaaagacaaagtcataagcctcaacttccctcaatggattacc
ctgaccatgtttgcctaa
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