Larimichthys crocea (large yellow croaker): 104932395
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Entry
104932395 CDS
T04659
Symbol
bcor
Name
(RefSeq) BCL-6 corepressor isoform X1
KO
K23215
bcl-6 corepressor
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
104932395 (bcor)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lco03036
]
104932395 (bcor)
Chromosome and associated proteins [BR:
lco03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
104932395 (bcor)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PUFD
BCOR
Ank_2
Ank
Ank_3
Ank_5
Ank_4
Motif
Other DBs
NCBI-GeneID:
104932395
NCBI-ProteinID:
XP_019112937
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Position
XVIII:19817182..19850051
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AA seq
1874 aa
AA seq
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MVDARLTPLAAMGLDRGTLIHDGLRLHGGVVYPGIRALPAEKSRETPGLPLTYNRDGLPE
LIYKPDGTLDSRKATNGYLGLYKGTPPGLHKPMLVPGAGAEGLGLERRGGPGEKASELAL
AGAGGSYLRLPWLTPYPEASMYPFMDTSKYAALNMYKASLLSQPNPYLPQHLAYSSLCAP
QGGNVNPAAAASAAERLYYMPPYPPSPISSPLVAPPMRIPAVTVAPTSLVHCQDKGLGVA
SPFAQQLHQPSPHPQHHQAAIDRDRSPSMSSRPSRPPSRKGSSNNNTTSSTSTSGTNSGS
NNSLPTDSSPRASSRLPQPPPPPTLIDNSLDLQRPVARIGQPPTSSSSSSSISASSSSTQ
SIPHPFSMSSMASEQPSPARPSPHKSRQRDGAPEHRSVGVERKPSRSPSKPNFERLAHQP
QATKDSAEKPLDLSGRILEFGLPPNGFPVKMDTIGSGGRYGHPPSRELLKENLTLSPSSH
SHSVVSSTSSKVPERPEMISTLHSSWVVPSPSPSHAQHTPGLPPSPRPNTDLALSQAKGS
SPSVIKHKGLERVLPQQRSSSCPRIGEPNHNVSSTQHSSLVSSRAHSPKPNGDWVKHSPS
QSEHQPVVGHHREGTEKSSQTTKRGETTPDVSSYKRPCLENGHPPGHLYLPQSDTYLNHS
LAYANRYLHYPISDGMALHSLPIAGKGPVYPHPVLLGSNSLYPAHLAAKHPLPYHNLPAG
PGGEYLTYNSQEMAHPLMQTHSDNKLPERGDLTLKSRGQEKSRGAVEECGSHRDHGIGKE
MGEGSQMKPERERGQGGSQSKTHSSSVTSREKIVCIDLVHSDTDVESNPTVHKQPSAETG
TKVNQNECCHSNQNLTKTDYEPKHQHHLSHPYPIHSGLSPTLRPNHTDRQPETPFGKAKV
LQDTSCPGATSPPSPGQFAKAEESSEERSPSPGDSGDQDQSTLRCARTSGERSSGKDKDR
DRDGRAFHLAQRSCMDMVNEELARERETEKEDSIVDLGESQGEGDEDEDDEGSHTSSKGA
RRSSLAKRIANSSGYVGDRFKCVTTELYADSSKLSREQRALQMEVISREGSNISQPAANW
ERAMMRFSELELKEKEGGGGGGGGGGGGGVCVSASAAAAAAAGRELADGQHRERALEHCQ
HTTRQGEREGVRPAYTNNRVPVLQRCGGQKEPLSPGHGATRGGLKDGARRLIRECESSHC
VPPILTPAKGYAEEKVGPGFGLTRKRPLALKCELEDTEREEGERVSHPEKRSRISADEQA
SADEDDDDDEVRKLKVCIELKGLRLSKAAAAGAGALSPDGSQIKQERAWPQPRSVATVQS
PQERKIRAGELEDRAAAQRAEINRKWGCEKLLNGVAASPLPPSQLKDRTQPLGPFSGDRG
LKEPRRGSPPSPAPTQPPSAGGGGAPPPPPPPPPPPPPLLKPRRHSDTDKPKGKRPCKTK
HTSQRDREREKRKEATPNSPGQRCVADLGAAEDDKLSEQRGAPRKGAASPNHYPCSPVKP
CSPAALCPPCLQPQANSRVCGGGVPPEASAAAAAAAAAAAVAGLHRTPPAELPTVRPIPP
EARRLIVNKNAGETLLQRAARLGYEEVVLYCLENRVCEVNHRDYAGYCALHEACARGWLS
IVQHLLDYGADINCSAQDGTRPIHDAVENDHLDVVRILLSYGADPTLATYSGRGLLKMTH
SDSMERFLTDYFADLQGRSDDDPGLYWEFYGSAVCESSEEGGVYDILADPPGPEDEEDKK
EVFEFEFSDRPLLPCYNIQVSLSQGPRNWLLLSDVLRRLRMSARGFRQTFPHMEVVTVAE
AEFYRQASLSQLFSCPEELEGFHPDSKDLLDLVEDSAELAALLGSTLECLDDHWDHPADK
LKDRIKANGKLGSS
NT seq
5625 nt
NT seq
+upstream
nt +downstream
nt
atggtggatgcaaggttgacgccactggcagcgatggggctggaccgaggcaccctgatt
cacgatggtcttcgtctccacggtggggttgtatacccagggatcagagccctgccagca
gagaaaagcagagagacgcctggcctccctctcacttataacagggacggcctcccagag
ctcatctacaagcccgatggcactctggacagtcgtaaggccactaatggatacctgggc
ctctacaaaggcacccctccaggtctccacaagcctatgctggttcctggagcaggagct
gaaggtttgggcttggaacgcaggggagggcctggagaaaaggcatctgagctggccttg
gcaggcgctggtggcagctacctccgcctgccatggctcaccccctaccccgaagcgagc
atgtatccctttatggacacgtccaagtacgcggctttaaacatgtacaaagcctccttg
ctcagccaaccgaacccctatctcccccagcacctggcctactcttctctgtgtgcaccc
caagggggcaatgttaaccctgctgcagccgcctctgcagccgagaggctctactacatg
cccccctatcctccttctcccatctcttctccgctggtggcgcctcctatgaggattccc
gcggtcacagtggcccccacatcgctggtgcactgccaggacaaggggctcggtgttgcg
tctccgtttgcacagcagcttcaccaaccttcccctcatcctcagcaccatcaggccgct
atagacagggaccggtccccgagcatgagcagcagaccgagcagacctccctctaggaag
gggtctagcaacaataacaccaccagtagcactagcaccagtggcaccaacagtgggagt
aataatagtctgcccactgattcgtctcctcgtgcatcttctcgcctcccccagcctccc
cctcctcctactctcattgacaattcactggacttacaaaggccagtcgctaggatagga
caaccgcccacctcctcctcctcttcttcctcaatatctgcctcatcctcatccacgcag
tccattcctcatccgttctccatgagcagcatggcgtcagagcagccctctcccgcccgg
cccagcccccacaaatcaaggcagagagacggggcgcccgagcacagaagtgtcggggtc
gagcggaaacccagcaggtcgccctccaaacccaactttgaaaggctggctcaccaaccc
caagcaaccaaagactcggcagagaagcccttggatttgtctggaaggatattggagttt
ggactgccccccaacggattcccagttaagatggacactattgggtcaggcggacgttac
ggacatcccccgagccgagagctcctaaaagaaaacctgaccctttctccttcctctcat
tctcactctgtggttagcagcacttcttcaaaggttccagagaggccagagatgattagc
actttacactcctcctgggtcgtacccagcccgtctccttcccatgcacagcacacaccg
ggcttgcccccctctccgaggcctaacacggacctggccctttcacaagccaaaggctcc
tcgccctccgtcatcaaacataagggtctggagagagtactccctcagcagcgtagctca
tcctgtccgaggataggggagcccaaccacaacgtttcctccactcaacactcctctctg
gtcagctccagggctcattctcctaaacccaacggtgactgggtcaaacacagtcccagt
caatcagaacatcaaccagttgttggccaccacagagagggaacggagaagtcctcccag
accactaagcgaggtgagacgactccagacgtgtcctcgtacaagaggccttgtttagag
aacggtcaccctcctggccacctttaccttcctcaaagtgacacttatctgaaccacagt
ttggcctacgccaacagatacctgcactaccccatctctgatggcatggcactacactcc
ctgccaatcgcagggaaaggtccagtctaccctcacccagtattgctgggcagcaacagc
ctttacccggcccacttagcagcaaaacaccctttaccctaccacaaccttccagctggt
ccaggaggggaatacctcacttataactcacaggagatggcccaccccctgatgcagact
cactcagacaataagctgccagagaggggggatttaaccttgaagtcccggggacaggag
aaatcccggggagctgtcgaggaatgcggcagccacagagatcacggcatcgggaaagag
atgggcgaaggaagccaaatgaagcccgagagggaacgtggacagggtggcagtcaaagc
aaaacccactcgtcctctgtaacatccagagaaaagattgtctgcattgaccttgtacat
tcagacaccgatgttgagtctaacccaacggtccacaaacagccctctgctgagaccggc
accaaagttaaccaaaatgaatgttgtcatagtaaccaaaatctgacaaagactgactat
gagccaaaacaccaacaccacctgtcccatccttatccaatccactctggcctgagcccc
accctgaggcccaatcacaccgacagacagccggagactccctttgggaaagcaaaggtt
cttcaggacacgagctgccccggcgcgacgtctccaccttctccagggcagttcgccaaa
gcagaggagagctcggaggaacggagccccagtcctggagactctggagaccaagaccag
agcaccttacggtgcgcccgcacatctggggagcgcagctccggtaaggacaaagacaga
gaccgagacggccgagctttccacctcgctcagcgcagctgcatggacatggtgaacgag
gagctggcgcgcgagagggagacggaaaaggaggacagcatcgtcgacctgggagagtct
caaggagaaggggacgaggacgaggacgacgagggtagccacacttcgtctaagggcgct
cgtagatccagtctggccaagaggatcgctaactcctcaggctacgttggcgaccgcttt
aaatgcgtcaccactgagctgtatgctgactccagcaagctgagccgtgaacagagagcg
ctacagatggaagtcatatcacgagaggggagtaatataagtcaacctgcagctaactgg
gagcgggcgatgatgcggttctcggagctggagctgaaggagaaggagggcggcggcggc
ggcggtggtggtggcggcggcggcggtgtgtgtgtgtctgcctcggcagcagcagcggca
gcagcaggacgagagctggcagacggccagcacagagagcgagcgctggaacactgccaa
cacaccaccaggcagggagagagggagggtgtccggccggcgtacaccaacaacagagtt
ccagtcctccagaggtgcggtggccagaaggagcctttgtccccggggcacggtgccacc
agaggagggctaaaggacggagcccggaggctgatcagagagtgtgaatcatcccactgc
gtgcctcctattttgacaccggctaaagggtacgcagaggagaaggtcggccccgggttt
ggactcacgaggaaacgcccactcgccctcaagtgtgaactcgaggacacggagagggag
gagggagagcgggtgtcccacccggagaaacgatccaggatttcagcggatgagcaggcc
agtgccgatgaagacgacgacgatgacgaggtgcggaagctcaaagtctgcatcgagctc
aaagggctccgactcagcaaggccgccgctgccggtgctggagcactatcgcccgacggc
tcccaaatcaaacaggagagagcgtggccccagccccgatctgtggccacggtgcagagc
ccgcaggagcgtaaaatcagggccggcgagctggaggacagagccgcggcgcagagagcc
gagatcaacaggaagtggggctgcgagaagctgcttaacggagtagctgcgtctcccctc
ccccccagccaactgaaggacaggacgcaaccgctgggccccttctcaggtgaccgtggc
ctcaaggagcccaggaggggctcccccccctctccggccccaacacagccgccgtccgcg
ggaggaggcggcgcccctcctcctcctcctccaccaccaccacctcctcctcctctcctc
aagccccgtcgccatagtgacacggacaaacccaagggcaagcggccgtgcaagaccaaa
cacaccagccagagggaccgagagcgggagaagaggaaagaggccacacctaacagcccc
ggtcagcgttgcgtggctgatctgggagcagctgaggatgacaagctgagcgagcagcgt
ggcgctccgaggaagggagccgcctctcctaatcattatccctgctctccggtcaagccc
tgctcccccgccgcgctctgtccgccctgcctgcagccccaggccaacagcagagtgtgc
ggcggtggcgtcccaccagaggcgtctgcagcggcggcggcggcggcggctgcagcagcg
gtcgctgggctgcacaggaccccccctgccgagctccccacggtgcgcccgatcccgccg
gaggctcgtcggctgatcgtgaacaagaacgccggggagactctgctccagagagccgca
cggctcggctacgaggaggtggtgctgtactgtctggagaacagagtgtgcgaggtgaat
cacagagactacgccggttactgcgctctccacgaggcgtgcgcccgcggctggctcagc
atagtccaacacctgctggactacggagccgacatcaactgcagcgcgcaggacggcacc
agaccgattcacgatgctgtggagaacgaccacctggacgtggtgcgaatcctgctgtcc
tacggcgctgaccccaccctggccacgtattccggccgcggcctgctcaagatgacccac
agcgacagtatggaacgcttcctcaccgattattttgctgaccttcagggccgctcagat
gacgacccggggctttattgggaattctatggcagcgctgtgtgtgagtcgagcgaagaa
ggcggtgtctatgacatcctcgctgaccctccgggcccagaggacgaggaggataagaag
gaggtgtttgagttcgagttctctgaccgacctctgctgccttgctacaacatccaggtg
tctctctcccaggggccgagaaactggctgcttctgtccgacgtgctccgtcgactgcgc
atgtccgcccgcggcttccgacagaccttcccccacatggaggtggtgaccgtggccgag
gcggagttttaccggcaggcctccctgtcgcagctcttctcctgcccggaggagctggag
ggcttccacccggacagcaaggacctgttggacctggtggaagacagcgccgagctggcc
gcccttctgggctccacactggagtgtttggacgaccactgggatcacccagcagacaaa
ctgaaggacagaatcaaggctaacggcaagttgggctcatcctga
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