Larimichthys crocea (large yellow croaker): 104932493
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Entry
104932493 CDS
T04659
Symbol
ube4b
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X2
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04120
Ubiquitin mediated proteolysis
lco04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104932493 (ube4b)
04120 Ubiquitin mediated proteolysis
104932493 (ube4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lco04121
]
104932493 (ube4b)
Enzymes [BR:
lco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104932493 (ube4b)
Ubiquitin system [BR:
lco04121
]
Ubiquitin ligases (E3)
U-box type E3
104932493 (ube4b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
104932493
NCBI-ProteinID:
XP_010746020
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All DBs
Position
XV:18394259..18411098
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AA seq
1183 aa
AA seq
DB search
MEELSADEIRRRRLVRLAGGQTSQPSTPLSTPLTSPQRETPPGPLPGPSAATQPLPPAAS
QSLGLNVHSGTPATSPMGTSGVAFGSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDT
ASCEKSMSQVDVDSGIENMEVEDSDRREKRNLTEKETSANSDVSEEQALQLICKILRVSW
KEQDRDVIFLPSLAAEFHQNPKDVYSDFKDLIGQILMEVLMMSTQSRVHNPFASLTATSQ
PIAAAKSPDHRLMLVQPSSQGGSPMGPSAGSFGASSLSSLGACGGGMSCDSASDRFTIEA
CKETEMLNYLIERFDSVGMEERKAPKMCSQPNVSQLLSNIRSQCISNVALVLQGTLTQPR
SPLQQSLLVPYMLCRNLPYGFIQELVRITHQEDEVFRQIFIPILHGLALAVKECSFDSDN
FKFPLMALAELCEIKFGKTHPVCNLATLLPLWCPKPLSPGCGREIQRLSYLGSFFSLSVF
AEDDTKVGDKYFSGPAITMENTRVVSQSLQHYLESARGDLFKILHNILLNGETRESALNY
MAALVNYNVKKAQMQTDDKLVSADGFMLNFLWVLQQLSMKIKLETVDPYYIFHPRCRLVV
SQEETRLKATMEELKSWLTELHEDPTKFSEPKFPTECFFLTLHTHHLSILSCCRRYIRRL
RAIRELNRTVEELKNSESQWKDSPLASRHREMLKRCKTQLKKLVRAKACADVGLLDENLL
RRCLQFYSTVIQLILRMVDPAYPNITLPLNPEIPKSFAALPEFYIEDVAEFLLFVVQYSP
QVLYEPCVQDIVTFLVVFICSQNYIRNPYLIAKLVEVLFVTNPAVQPRTQRFSEMMENHP
LSVKQLVPALMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNLAHHGTFMEEFNSG
KQFVRYINMLINDTTFLLDESLESLKRIHEVQEEMKNKEQWEQLPREQQQSRQSQLTQDE
RVSRSYLALATETVEMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVEN
PEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSRELFEEVISKMRKAGIKSSIA
IEKFKLLLEKVEEIVAKNSQSEMDYSDAPDEFKDPLMDTLMTDPVILPSGNIMDRSIILR
HLLNSPTDPFNRQPLTESMLESVPELKERIHAWMREKQGGRPV
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctgagcgcagacgagattcgcagaaggagactggtgcgactggcaggtgga
cagacatcacagcccagtacccctctcagcacacccctgacatccccacagagagagact
ccccccggaccccttcctggaccctctgccgcaacccaacccctgccaccagctgcctct
caatcattggggctcaatgtccacagtggtacccctgccacatctcctatgggcacctct
ggggtggcatttggtagtcagagcagcgagggtgtgagctccctctccagctccccctcc
aacagtcttgagactcagtcccaaagtctgtcccgatcgcagagcatggacattgacact
gcctcctgtgaaaagagcatgtcccaggtggatgtggactcagggatagagaacatggag
gtggaggacagcgatcgcagggagaagaggaacttgactgaaaaggaaacctctgcaaac
tcagatgtctcagaagaacaggctctgcagctcatttgtaagatcctccgcgtatcgtgg
aaggagcaggatagagatgtcatctttctcccttctctggctgcagagtttcaccagaac
cctaaagatgtgtactctgacttcaaagacctgattggtcagattctgatggaagtctta
atgatgtccacccagtcacgtgtccacaacccgtttgccagcttaaccgccacctctcag
ccaattgcagcagccaaatcccctgaccaccgtctgatgctggtgcagccctccagccaa
ggtggcagcccaatgggccccagtgcagggtcctttggagccagctctctgtccagtctt
ggtgcatgtggagggggcatgtcttgtgattcagccagcgaccgcttcaccattgaagca
tgcaaagagacagagatgctgaactacctcattgagcgttttgacagtgttggcatggag
gagaggaaagctcccaagatgtgcagccaaccaaatgtcagccagcttctcagcaacatt
cgctctcagtgtatttccaatgttgccctggtcctacaaggcaccctgacccagccacgg
agtcctctacagcagtccttgctggtaccttatatgctgtgtcggaaccttccatatggc
tttattcaggagctggtgcgcattacacaccaggaggacgaggtgttcagacagatcttc
attcccatcctccatggactggctcttgcggtgaaagaatgttcctttgacagtgacaac
tttaaattccccctcatggcattagctgagctttgtgagatcaagtttggaaagactcac
ccagtgtgcaatttggcaacgttgctgcctctatggtgtcccaaacctctgagccctggt
tgtggcagagagatccagagactgtcctacctgggatccttcttcagcctctctgtgttt
gctgaggatgataccaaagtaggagacaagtatttctctggcccggccatcactatggag
aacacacgagttgtcagccaatcattgcagcactacctggagtcagcaaggggtgacctg
ttcaaaattctacataacatcctactaaatggagaaacacgcgagtcagctcttaattac
atggcagctctagtcaactacaatgtgaaaaaagcccagatgcagactgatgacaagctg
gtgtctgcagacggcttcatgctcaacttcttatgggtgctgcaacagctgagcatgaag
atcaagctggagacggtggatccctactacattttccatccacggtgtcgccttgttgtc
agtcaagaagagacacgtctgaaagccaccatggaggagctcaagagctggctgacagag
ctgcatgaagaccccaccaagttttcagaacccaagttccccaccgagtgtttcttcttg
acgctgcacacccaccatttgtccatcctgtcttgctgcaggcgctacatccgcaggttg
cgagccatccgtgaattgaacaggactgtagaggagctgaagaacagtgaaagccaatgg
aaagattctcccctggctagtcgacacagagagatgctcaagagatgcaaaactcagctc
aagaaactggtgcgagccaaagcttgtgctgacgtaggccttctggatgagaacctgctc
cgcagatgtctgcagttctacagcacagtcattcagctcattcttcgcatggtggaccct
gcctacccaaacatcaccctgccattgaacccagagattcccaaaagctttgctgctctg
cctgaattctacatcgaagatgtggcagagtttctgctttttgttgtgcagtattctccc
caggttttatatgagccgtgtgtccaggacattgtcaccttcttggtggtgttcatctgc
agccagaactacatcaggaacccctaccttatcgccaagttggtggaggtgctgtttgtc
accaaccctgctgtacagcctcgtactcagcgattctctgaaatgatggagaaccacccg
ttgtctgtcaagcagctggtccccgccctcatgaagttctacactgatgttgagcatacc
ggtgccaccagcgaattctatgataagttcactatacggtaccatatcagcactatcttc
aagagtctctggcagaacctcgcccaccatggcaccttcatggaggagttcaattctgga
aagcagtttgtgcgctacatcaacatgctgattaatgacaccaccttcttgttagacgag
agcctcgagtccttgaagcgtatccacgaagttcaggaggagatgaagaataaggagcag
tgggagcagctgcctagggagcagcagcagagccgccagtcccaactgactcaggatgag
cgggtgtctcgctcctatctggccctggccacagagacggttgaaatgtttcacatcctc
accaagcaggtccagaagcctttcctcaggcctgagctggggcctcgtttagctgccatg
ctgaactttaacctccagcagctctgtgggcccaagtgtcgggatctgaaggtggagaac
cctgagaagtacggctttgagccgaagaaactcttagatcagctgaccgacatctacctg
cagctggactgtgcccgctttgctaaagcaattgcagatgatcagcggtcttacagccgt
gaactctttgaagaagtgatttcaaagatgagaaaggctggtattaagtcctccatcgcc
attgaaaaattcaagctgctattggagaaggtggaggaaatagtcgccaagaactcccag
tctgaaatggactacagtgacgcacctgacgagttcaaagaccctctgatggacacactc
atgactgaccctgtgatactgccctcggggaacatcatggaccgatccatcatcctgcgc
cacctgctcaactcccccactgatcccttcaacagacagccactcacagagagcatgctg
gagtcagtccctgagctgaaggagaggatccatgcctggatgagagagaaacagggcgga
cggcctgtctaa
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integrated database retrieval system
