Larimichthys crocea (large yellow croaker): 104932606
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Entry
104932606 CDS
T04659
Name
(RefSeq) integrin alpha-6 isoform X1
KO
K06485
integrin alpha 6
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04382
Cornified envelope formation
lco04510
Focal adhesion
lco04512
ECM-receptor interaction
lco04514
Cell adhesion molecule (CAM) interaction
lco04518
Integrin signaling
lco04810
Regulation of actin cytoskeleton
lco04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104932606
04514 Cell adhesion molecule (CAM) interaction
104932606
04518 Integrin signaling
104932606
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104932606
09142 Cell motility
04820 Cytoskeleton in muscle cells
104932606
04810 Regulation of actin cytoskeleton
104932606
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
104932606
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lco04147
]
104932606
04515 Cell adhesion molecules [BR:
lco04515
]
104932606
04090 CD molecules [BR:
lco04090
]
104932606
Exosome [BR:
lco04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
104932606
Exosomal proteins of breast milk
104932606
Cell adhesion molecules [BR:
lco04515
]
Integrins
Integrin alpha subunits
104932606
CD molecules [BR:
lco04090
]
Proteins
104932606
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_1
Integrin_A_Ig_2
FG-GAP
FG-GAP_3
Integrin_alpha
OST_P1
DUF1331
Motif
Other DBs
NCBI-GeneID:
104932606
NCBI-ProteinID:
XP_027141104
LinkDB
All DBs
Position
XII:complement(16722343..16737850)
Genome browser
AA seq
1085 aa
AA seq
DB search
MEGRITCGLWPVVVFLLGCGRLSAFNLDTENALRKNGDPGSLFGFSLAMHRQLDPVDKRM
LLVGAPRAKALRGQTSKVTGGLYNCDMSTNSNGCSRVVFDNTEDIMRESKENQWMGVTVN
SQGPGGMIVTCAHRYQRRANVNRPALESRDIIGRCYVLSQDLSSSSYGGTWHFCDSRPRG
HEMFGSCQQGLSATFDKDFHYVIFGAPGAYNWKGIVRLEQKNESFIDMGIFDDGPFEVGD
ESEKNPDLVPVPANSYLGFSLDSGKGVTHRDQLTVVAGAPRANHSGAVVLLKKGDDTSHI
LLEEYTLEGEGLASSFGYDLALLDLNRDGWLDIVVGAPQYFEKEGEIGGAVYVYMNKNGK
WNEVKPIRIDGPQDSMFGLAVENLGDINQDSYHDFAVGAPYEGNGAGAVYIYHGSATGLS
SKKAAQVLSGKAVGVTNFGYSLAGNMDLDKNSYPDLAVGSLSDSVFVYKARPVINIKKEI
KITPKQIDLTNKNCGNTFCLQVEACFTYTAKPTSYTPSLTLAYSLEADADRRKNHLSSRA
TFSDGTEQSHEYKDTITLNSKGKEKCIRHQLKIQENIKDKLRGIPIDVSVEIDNAKRKRR
QSSTSQLSPVLDANEPMTTRSEVHFLKEGCGKDNICQSNLQVKYRYMTADKDTFSPMALE
KGVPLFTFSNQKTIALEVTVTNQKGDDAYEAFVIASFPPSLTYSATRSLPNQRQVNCVAN
KNGSVADCDIGNPFKRDTETTFFIILGTTGISLNTNEVEIDLQLDTTSDQTKTASVKAKA
KVAIKLQLSVSGQAQPSQVYFSGSVKGETAIKSESEIGSAITHQFRIINLGRRLTDFSNA
TLNIEWPKEVEQGKVLLYLTKISSTGVDRLECTPANEINRFKKNLESGNTRTRRAADNTE
EINEGTISRYSDKKNYKTLSCGHGANCVTIKCPLRGMDSNAAITLYSRLWNSTFIEDHSK
LHHVEVIVKASLHVDSSTKNTVLEKSETVVKLTVFPERREARYGGVPWWIILLSILFGLL
LLALLAFLLWKCGFFKRAKYEDRVPSYNAVRIKRGERAITPGNGNWENLEKKPWMTTWHD
KEHYS
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atggagggcaggatcacctgtggactgtggcctgtggtcgtctttctcttgggatgtggg
cgactgtccgctttcaatctggacaccgagaatgctctgcggaagaacggggatccaggc
agcctcttcggcttctctctcgccatgcaccggcagctcgatccggtggataaaagaatg
ctgctggttggtgccccgagagcaaaagccttgaggggtcaaacgtctaaagtgacagga
ggactgtacaactgtgacatgagcaccaactcgaatggttgctccagagttgtatttgat
aacaccgaggatataatgagagaaagcaaagagaaccaatggatgggagtgacagtcaac
agtcagggcccaggaggcatgattgtgacctgtgcccatcgctaccagcggcgtgccaac
gtgaacagacccgccctcgaatctcgtgacattattggccgttgctatgtgctgagtcag
gacttgagtagcagcagctacggaggcacctggcatttctgcgatagccggcccagaggt
catgagatgtttggctcgtgccagcagggcctctctgcaacatttgacaaggattttcac
tatgtcatctttggggctcctggggcgtacaactggaaaggtatagtacgcttggaacaa
aagaacgaatcgttcatagacatggggatctttgacgacggtccttttgaggtgggagat
gaaagtgaaaagaaccctgatcttgtccctgttcctgccaacagttatctgggcttctct
ctggactcagggaagggtgtgactcatagggaccaactaacggtagtggcgggagctccc
agagcaaaccacagtggagcggtggtgctactgaagaaaggcgatgatacaagccacatc
ttgctagaagagtacaccctggaaggggaagggctggcttcttctttcggctatgatctg
gccttgctggatctcaatcgggacggttggctggacatagtggtaggagcacctcagtac
tttgagaaggagggagaaattggaggagctgtctacgtctacatgaacaaaaatggaaag
tggaatgaagtcaagcccatcagaatagatggacctcaggactccatgtttggcctggct
gtggaaaacctgggagacataaatcaggatagttaccatgattttgcagtgggagctcct
tatgagggtaatggtgcaggggctgtttacatttaccatggatcagcgacgggtctcagc
tctaagaaagctgcacaggttctgtccggcaaggctgtaggagtcacgaattttggctac
tctttggcgggcaacatggacctggataagaactcctaccctgacctggctgtcggatcc
ctctctgactctgtctttgtctacaaagcccgtccagttattaacatcaagaaggaaatc
aagattacaccgaagcaaatcgacctcacaaataaaaactgtggcaacaccttctgcttg
caagttgaggcatgcttcacctacactgccaagcccacgagctacactcccagtctgacg
ctggcatactccctggaggccgatgctgaccgcaggaagaaccatctcagctccagggcg
actttctctgatggcactgagcaaagccatgaatacaaagacaccatcaccttgaacagc
aaaggaaaggaaaagtgcattaggcatcaactcaaaatacaggaaaatatcaaagacaag
ctgcgggggatccccattgatgtgtctgtggaaattgacaatgccaagcgcaaacgcaga
cagagctcaacttctcagctgtcgcctgtcctggatgccaatgagccaatgacaactcga
tcagaggtgcatttcctgaaggagggttgtggcaaggacaatatttgtcagagcaacttg
caggtgaaatatcgctacatgacagctgacaaagacacgttcagtcctatggctctggag
aaaggtgtgccgctgttcacgttcagcaaccagaagaccatcgccttggaggtcactgtg
accaatcaaaaaggagatgatgcatatgaagcctttgtgatcgcctccttcccaccctcc
cttacctactctgctacccgctctctgcctaatcagcggcaggtaaactgtgtagccaat
aaaaacggttctgtggctgattgtgacattggaaaccccttcaaacgcgacacagagaca
acgttcttcatcattctgggtacaacaggcatctctcttaacactaatgaagtggagatt
gatcttcagttagacacgacaagtgaccagacgaaaacagcctctgttaaagcaaaggca
aaggtggccatcaaattgcagctgtctgtatcaggacaagcccagccatctcaggtctac
ttttcaggatcagtcaaaggtgaaacggccatcaagtctgaaagtgaaattggcagtgcc
atcacacaccagtttcgaatcatcaatctgggaaggaggttgacagactttagcaacgcc
accctcaacatcgagtggccaaaggaagtagaacaggggaaggtgctgctttacctgacg
aagatcagctcaactggagtggaccgcctagagtgcactcctgcaaatgagatcaaccgt
tttaaaaagaacctggaatcaggtaacaccaggacgagacgagctgcagataacacagag
gaaattaacgagggcacgatttcacgttattcggacaagaagaactacaaaactctgtcc
tgtggccatggggcaaattgtgtgacaataaagtgccccctgcggggcatggacagtaat
gcagccatcactctctactctcgcctctggaatagcaccttcatagaggatcattccaag
ttacatcatgtggaagtgatagtgaaggcctctctacatgttgacagctcaacaaagaac
acagtgctggaaaagtctgagacagtggtgaaactgacagtattcccagagaggcgtgaa
gcccggtatggaggagtgccgtggtggatcatcctgttgtctatcctgttcgggctgctg
ttgttggccctgttggctttccttctctggaagtgtggcttttttaagcgagcaaaatat
gaagacagggttcccagttacaacgctgtccggatcaaacggggggagagagcaataacc
cctgggaatggtaactgggaaaacctggaaaagaagccctggatgacaacctggcatgac
aaagaacattattcttaa
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