Larimichthys crocea (large yellow croaker): 104932635
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Entry
104932635 CDS
T04659
Symbol
ube3c
Name
(RefSeq) ubiquitin-protein ligase E3C
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104932635 (ube3c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lco04121
]
104932635 (ube3c)
Enzymes [BR:
lco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
104932635 (ube3c)
Ubiquitin system [BR:
lco04121
]
Ubiquitin ligases (E3)
HECT type E3
104932635 (ube3c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
DUF3335
Motif
Other DBs
NCBI-GeneID:
104932635
NCBI-ProteinID:
XP_027130014
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All DBs
Position
XXIII:complement(8427849..8456875)
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AA seq
1085 aa
AA seq
DB search
MFSFEGDFKTRPKVSLGGASKKEEKASLLHRTQEERRKREDERKRLKNAIIIQSYIRGYQ
DLKRQYATQRAQFDERVSQTLAGGVQHALDGPSLCLLSRQLIFFYRQSVDAHRLIWLCQN
LVKLNSQFVKLLVGPQTNMRQTCMFQIKRILGFCCRFLQNCKDDSLNVSVPMRMLEIFSS
EKTYLPVIPDANYVASLLEQILHYMVQKGYYRSLYILVNHRLPSSLEYSDAPSVPLASTL
LEHILKPLHFTYSSCTTGARQFVFSAFTEEFISAPFTEQIFHFFIPALSDVRLSFPFEAF
LSSLKDTIGSSSAPQNQAPWVFYFVLSAGENCLGSLSEEGLLLYLRALQTLLPLLPVSES
SNRPEVGSDSEDEDDTGIHPPPMQDDSRISVQLITEECVHKLDTKHQTNALLNLVWRDSA
SEDVFTMMASICHTLMVQHRLMVPKVRLLYSLAFNARFLRHLWHLITSMTTKMITGSMVP
LLQLISRGSPMTFEDSNRIIPLFYLFSSLFSHSLISVHDSEFFGQMEMEGQTQSTMMPFT
LSELVTLSRCLRDACLGIIKLAYPETKTEHREEYMAAFRSVGVKTNTEVQQRIQAEQKRW
VQLFKVITNLVKMVKARDIRRPFCPAGHWLSQEVNIRADKVTQLYVPSARHVWRTRRMGR
IGPLQSTLDVGLEPPQLSVSEERHLAILTELPFVVPFEERVKIFQRLIYADKRDVQGDGP
FPDGINVTIRRNYIYEDAYDKLSPENEPDLKKRIRVHLLNAHGLDEAGIDGGGIFREFLN
ELLKSGFNPNQGFFKTTNEGLLYPSPAAEMLNGDSFTRHYYFLGRILGKALYENMLVELP
FASFFLSKLLGTSADVDIHHLASLDPEMYRNLLFLKSYEGDVEELGLNFTVVNNDLGEAQ
VVELKLGGKDIPVTTANRIAYIHLVADYRLNKQIRPHCLAFRQGLANVVNLEWLRMFDQQ
EIQVLISGAHVPISLDDLKKFTNYSGGYSANHPVIQIFWEVVEGFTDEEKRKLLKFVTSC
SRPPLLGFKELYPVFCIHNGGTDLERLPTASTCMNLLKLPEFCDQHLMRNKLLYAIESSA
GFELS
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atgtttagctttgagggagatttcaagacaagacccaaggtgtcacttggaggagcgagt
aaaaaggaggagaaggcctctctgctgcaccgcactcaggaagaaagacggaaaagagag
gatgaaagaaaacggctgaagaacgccatcatcattcagtcctacatacgtggctaccag
gacttgaaacgacagtatgccactcagagagcccagtttgatgagcgtgtcagccagact
ctggcagggggagttcagcacgcgttggatggtcctagtctctgccttttatcaagacaa
ctcatatttttctacagacagagtgtggatgcacatagattgatatggttatgccagaac
ctggtgaaactcaacagtcagtttgtgaagctgctggtgggcccacagacaaacatgaga
caaacatgtatgtttcagatcaagcggatcttaggcttctgctgcagattcctacagaac
tgcaaggacgacagtttaaatgtgtcggtccccatgcggatgctagaaatcttttcttca
gagaaaacctatcttcccgttattccagatgctaactatgtagcttcattactcgagcag
attttgcactatatggtacagaaaggatactacaggtcgctgtacattctcgtgaatcac
agactcccttccagtctggagtacagcgacgctccctctgtccctctagcaagcacactg
ttggagcacatcctcaaacctctgcactttacctactcctcctgcacaacaggcgcaagg
cagtttgtattttcagcctttactgaggagtttatctctgcgccgttcaccgagcagatc
tttcacttctttatcccggcgctgtccgacgttcgtctctcattcccgttcgaggccttc
ctgagctccctgaaagacaccatcggctcctcctcggcaccgcagaaccaggcgccgtgg
gtgttttactttgtcctctctgcaggggagaactgcttaggttcactatcagaggagggt
ctcctgctgtaccttcgggctctgcagacgctgctgccgctgttgccggtgtcagagagc
agcaacaggcctgaagttggcagcgactcggaggacgaggatgacactggaatccatcca
cctcccatgcaggacgacagcagaatttccgtgcagctgatcacagaggagtgcgtccac
aaactggacacgaagcaccagactaacgccctgctgaacctggtgtggcgagattcagcc
agcgaggacgttttcaccatgatggcgtccatatgtcacacgctcatggtccagcatcgc
ctcatggtgccgaaagtcagacttctgtacagtttagctttcaatgcacgtttcctgagg
catctctggcacctgataacttccatgacgaccaaaatgatcaccggctccatggtgcca
ctgttgcagctgatctcgcgaggatctcccatgacgttcgaggactccaaccgcatcatt
cctctcttctatctcttcagctctctcttcagccactcgctcatctctgtgcacgacagc
gagtttttcggtcaaatggaaatggaaggtcagacgcagtccaccatgatgcccttcacg
ctgtcagagctggtgactctgtctcgctgtctgagggacgcatgcctgggaatcatcaag
ctggcctaccccgagaccaaaacagagcaccgcgaggagtacatggccgccttccgcagt
gtgggcgtcaagacgaacaccgaggttcagcagcgcatccaggccgagcagaaacgctgg
gtgcagctcttcaaggtcatcactaacttggtgaagatggtgaaagctcgcgacatcaga
cgacccttctgtccagcaggtcactggctctcgcaggaggtcaacatccgagcagataag
gtcacccagttgtacgtcccgtctgcaagacacgtgtggaggacgagaaggatgggccgc
attgggccgcttcagtccacacttgatgttggtttagagcctccgcagctgtctgtgtct
gaagagagacatctggccatcctcaccgagctccctttcgtggttcccttcgaggagcga
gtcaagatcttccagaggttaatctatgctgacaaacgggacgtgcagggggatgggcca
ttccccgatggcattaatgtcaccatcagacgcaactacatctatgaagatgcgtacgat
aaactctctccagaaaacgaaccggacctgaagaaacggattcgggtccatctgctgaac
gctcacggcctggacgaggctggcattgacggcgggggcatcttccgcgagtttctcaat
gagctcctcaaatccggcttcaatcccaaccagggcttcttcaagacgaccaatgagggc
ctgctgtatcccagccccgccgcggagatgctgaacggagactccttcacgaggcattac
tactttctaggcaggatcctcggaaaggcgctgtatgagaacatgttggtggagttgccc
ttcgccagcttcttcctgtccaaacttttgggaaccagcgcggacgtggacatccatcac
ctggcgtcgctggacccggagatgtaccgcaaccttctcttcctcaagagctacgagggc
gacgtggaggagctgggcctcaacttcacggtggtcaacaatgatctgggagaggctcag
gtggttgagctgaagttgggaggcaaagacattcctgtgaccacggcaaaccggatagcc
tacatccatttggtggctgactacagactgaacaagcagatcaggcctcactgcctggcc
ttcagacagggcctggccaacgtggtcaacctggagtggctgcgcatgtttgaccagcag
gaaatccaggtgctgatatctggggctcatgtgccaatttctcttgatgacctgaaaaag
ttcacaaactactcaggcgggtactctgccaatcaccccgtcatccagatcttttgggaa
gtggtcgaaggcttcacagacgaggagaagcgcaagctcctgaagtttgtcaccagctgc
tccagacctccgctgctgggcttcaaggagctttacccggtcttctgcatccacaacggc
ggcaccgacctggagcgcctgcccaccgccagcacctgcatgaacctgctcaagctcccg
gagttctgcgaccagcacctgatgaggaacaagctgttgtacgccatcgagtcgtccgcc
gggttcgagctgagctga
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