Larimichthys crocea (large yellow croaker): 104932710
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Entry
104932710 CDS
T04659
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lco03041
]
104932710
Enzymes [BR:
lco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104932710
Spliceosome [BR:
lco03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
104932710
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
104932710
NCBI-ProteinID:
XP_019133820
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All DBs
Position
XII:complement(27404766..27413362)
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AA seq
651 aa
AA seq
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MRGSYGDRDRDRGRDRGSPRFGSSRGGPPPGRKFGNPGDRLRKKRWDLDELPKFEKNFYT
EHSEVQRMSQYDVDEYRRKKEITVRGSGCPKPITNFHQAQYPQYVMDVLMQQNFKEPTAI
QAQGFPLALSGRDMVGIAQTGSGKTLSYLLPAIVHINHQPYLERGDGPICLVLAPTRELA
QQVQQVAYDYGKSSRIKSTCVYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLR
RCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYVQI
NVGALELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKKRCDDLTRR
MRRDGWPAMCIHGDKSQPERDWVLSEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPN
SSEDYIHRIGRTARSTNKGTAYTFFTPGNLRQARELIRVLEEARQAINPKLLQLVDTGRG
GGGGGGRPRFRGNSNSNNPNLMYQDECDRRMRSVGGGGSTTTKDSRGGSSSSSSYGRDGR
DSRGGSSRDGDRSSSSSSSYRDRSSRDGGRSYGSSATSNSYDQYQNTNGSSSSQYSSSRA
SSGTGGSGVGQNPPTSSGPQPLMAQQFNPPQPMMGLMGHSPFQFASPPPRK
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgagaggctcgtacggagacagagaccgggaccgcggccgtgacagagggagccctcgt
ttcgggtccagcagaggcggcccaccaccaggtagaaagtttggcaaccccggggaccgt
ttacgaaagaagagatgggacctggatgagctccccaaatttgagaagaacttttatact
gaacattcagaagtgcaacgaatgagccagtatgatgtcgatgagtatcgcaggaagaaa
gaaatcacagttcgaggctcaggctgcccaaagcccatcaccaacttccatcaggcacag
tatccccagtatgtaatggatgtactgatgcagcagaatttcaaggagcccacagccatt
caggcacaaggttttcctctggccctcagcggtagagacatggtgggcattgctcagact
ggctctgggaaaaccttatcgtatctcctgcctgccattgtgcacatcaatcatcagccc
tacctggagcgaggagatggacccatttgcttggttctggcccccacaagagaactggca
cagcaggtccagcaggtggcgtacgactacggaaagtcctcccgcatcaaaagcacttgt
gtttacggtggtgctcccaagggacctcaaatccgagacttggagaggggtgttgagatc
tgcattgccactccgggtcgtctgattgacttccttgaggccggaaagaccaatctgcga
cgttgcacatacttggttttggatgaagcagaccgcatgctggacatgggttttgaacca
cagattcgcaagattgtggaccagatcaggcccgacagacagaccctgatgtggagcgct
acctggcctaaagaggttcgccagctggcagaagactttctaaaagactatgtccaaatc
aatgttggagcgctggaactcagcgccaatcacaacatccttcagatagtcgatgtttgt
atggagagtgagaaggaccacaagttgatccagctgatggaggagatcatggctgagaaa
gagaacaaaaccatcatctttgtggagaccaagaaacgatgtgacgacctcacgcgcagg
atgagacgtgatgggtggccagcgatgtgtattcatggtgacaagagccagccagagaga
gactgggtgttatcagagtttcgtagcggcaaagctcccatccttatcgctactgatgtg
gcctcacgtggtttggatgtggaggatgtgaagtttgtcatcaattacgactatcccaac
tcgtccgaggactacatccatcgcatcggtcgcacagcccgcagcaccaacaaaggtacc
gcctacacctttttcactccggggaacctccgccaggcccgtgagctgatccgggtgctg
gaggaggcccgacaggccatcaatcctaaactactacagctggttgatactggacgtgga
ggaggcggaggaggtggccgtccccgtttccgtggcaactccaattctaacaaccccaac
ctgatgtaccaggatgagtgtgacaggcgaatgcgctccgtgggtgggggcggcagcacc
accaccaaggacagccgtggtggcagcagcagcagcagcagctatggccgtgacggccga
gatagccgcggaggaagcagccgggacggagaccgctcgtcctcgtcttcctcctcttac
agagaccgcagcagcagggatggaggacgcagctatggctccagcgccacctccaactcg
tacgaccagtaccagaataccaacggcagcagcagcagtcagtacagcagttcccgggcc
agctcggggacagggggcagtggagtggggcagaatccacctacttcatcgggtccccag
cctctgatggcccagcagttcaaccctccccagcccatgatgggcctgatggggcactca
ccattccagtttgcttctccaccccccagaaagtaa
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