Larimichthys crocea (large yellow croaker): 104932718
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Entry
104932718 CDS
T04659
Name
(RefSeq) trinucleotide repeat-containing gene 6B protein
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lco03019
]
104932718
03036 Chromosome and associated proteins [BR:
lco03036
]
104932718
Messenger RNA biogenesis [BR:
lco03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104932718
Chromosome and associated proteins [BR:
lco03036
]
Eukaryotic type
Gene silencing
piRNA pathway
104932718
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
RRM_occluded
RRM_1
Motif
Other DBs
NCBI-GeneID:
104932718
NCBI-ProteinID:
XP_027140534
LinkDB
All DBs
Position
XII:complement(27438118..27453274)
Genome browser
AA seq
2069 aa
AA seq
DB search
MEDKKKKKEDKKKRETSQKVPEQKIKVPESAKPSCSQPLATPGSVSPSPGPVAPSSPSPG
AAGASAQVPPGGGNNAKQRTAVANGQPSSSPSGSQTSQQQRYMSREVPPRFRCQQDHKVL
LKRGQPPLSSMLLGGGGGGAGEGGAGGVGGGSGWGATPPLSSQGADNPNANAAGGTDSNL
GSSSPSLPNSSSSSLCVAALSSSSTTTTSTYANSTWGAGSGSPSSSQGCGKVIVDGTDLG
DWPSILGGAKLSSDGAGGGVQEQDCPGNNNSSASWSERNIQQKGGAGGGGGAGNMDNPSS
PRSSPLSSSSSLNECVQSSGGVWGSSTSSQVEAGLGSAAFYNSKVSHLLPGPQESPVGGS
SSVHGANFNPNVNPSAWPALVQSGTSTSASDGLPLHSSITSASSFSASTPLITTHSPSSV
NQTGLHQQHTETAVGTRSGEEQQHLGSLGPELGSGGGARGAGPNQEGGDESDCGVASVEG
EGSGNLSGSSTSSSAASSSWRSMPPVSSDLSTGASQADGWGGGGTVAQGQEGNVWGFGSQ
GDKAGWARGNDGGSNTPVVSQGAWEGGSSEAEWGGTVGGVSSSNLAIGGGRGGDGSSSSN
SSSSSGGSGGIGGSVLQDSASPKFATMTKAWDNQKGMESGDSAVGEWAGQGGGTGGGGPS
GSSGGGSIAGSGGGGSDGGQKSEGASSAQNSQQTSNAEVALLSMLNRSDLDPRVLSNTGW
GQTQIRQNVAWDLDTARGVGNRNERNASSSSAFSSATMNTTTSRGPGYPSNNSSITNDLS
ASSHTTNLNSGPATVRDGWDGATQSTPGPHMPGSNVRKPGTPEEELEDNQGKAAGGWGDL
PPEKRSKGWGTEDQQWGERRGRGGNWRDFGEQGSGWADGPEDKQGRTGGWKGAGRGEAGG
WGGDWGQRDSIPGGGSGDGRSRGGSNADEGSSWGNLEEGGSQRGGWGGGGGGGGGGGGGD
VGGSKSHQDWGSAKPHAAAAQIPNSQVAPMKAPNQQQHQSQGQQPQGGPMQGGWNSRSNV
GGGGPPSKNQNQSSGWTSGPIPRISAGGGDSLEPSGWEEPSPQSISRKMEIDDGTSAWGD
PTRYNSKNVNLWDKKSATPDQSHSQQAPPPPPMQQQPPRRQQGMQHSRDTNTGNAAVGPG
MWGGGAQSVDNGTAAWGQTTEAATGWGEPDESGKGSGWGNPSPNPSKPAGPKSMESWGGK
GEGSVAASRHPSWDEEDDGGGGVWNSTGSQGSSSSFNSGGWGQSHGGKRGNIKSGGGDSW
MNPVSRQFSNMGLLGDDPSVDKKMEGEKRGITDYNGEMRRGGRGGGGYRIPSSKDMGPVD
MGPYGEKMGGHGVFVGSGGGMPPPRGMHQPGMHPMNPSQGLRAQVPHQFLSAQVPGPMLK
QMPSPGGSVGGVVGGVGGVGGVGSVGGVGGVGGGVFPPQISPQQLAMLSNIYPHMQQFHL
ACQLLLQQQQQQQQQQQLLQNQRKFPQPQPLRQQPDPQQLARIMAILQQQRQHQQGGVGG
AATGGGSSKLSPSHLGGGLSKQPMVDPLPHPGMGGTLSDLHAKTQGMYSGLAPGGNLSSL
ELSPMMGGMKDTGGQQSRFKWMMEGHSPAPSPPDTALHKNGPLPSAIKVRGGSPYSQYEM
LGGDGLGIPPQGSTDNWHRTPGSKMGNKPATSSWPPEFQPGVPWKGIQSSGDPESDPYMT
PGSVLGSPGPPSLNDSDHQLLRDNIGPNPTLNTSLPSPGAWPYSASDSPLSNAHSTGKYS
EYKPSWPPEPIGQNKLWKTNRNSSQLPRPPPGLTNQKQASSSPWGSGGPRLARSWGGGGM
NQESRFGPGSAWSDGVASRGSCWLLLSNLTPQIDGSTLRTICMQHGPLLTFHLGLTQGSA
LIRYNSRQEAAKAQGALHMCVLGNTTILAEFVSEDEVARYFAHSQAGGAEGPGSGGAAAG
GTQGSSGTGTTVASSGGSSPGNERAPAGTTGGNGSGGGGGGESGAAVLGSVRSSGSAWQS
LDGTGSSSETSSAQGPGLGIFSQWSTNGAGEGGGVGGVESGRSGLWGGMTAGYPSSSLWG
APQMEERHQMDSPAALLPGDLLGGGADSI
NT seq
6210 nt
NT seq
+upstream
nt +downstream
nt
atggaagacaagaaaaagaagaaagaagataaaaagaaaagggaaacctctcagaaggtg
ccagaacagaaaatcaaagtgccagaatcagccaagccctcctgttcccagccgctcgcc
accccaggctcagtgtcccccagccctggccctgttgccccctcgtcccccagtcctggt
gcagccggggcttctgcacaagttcctcctggtggcgggaacaatgcaaagcagcggact
gctgtggccaacggacagccctcctcctccccctctggaagccagacctcccaacagcag
cgctacatgtccagagaggttccaccgagatttcgctgccagcaggaccataaagtgcta
ctgaagaggggccagccaccgctgtcctccatgctgctggggggaggaggaggaggagca
ggggaagggggtgcagggggagttggagggggcagtggatggggagccactccacctctt
tcctcacagggagcagataaccccaatgcaaacgcagctggaggcacagattccaacctg
ggttcatcctccccttcactccccaactcctcctcatcctcattatgtgtcgctgctctg
tcgtcgtcttctactactactacttcaacttatgcaaattccacatggggggcaggctct
ggcagcccgtcctcttctcagggctgcgggaaggtgattgtggatgggactgacctgggg
gactggcctagcatcctaggcggggccaaattgagttctgatggggctggaggaggggtg
caggagcaagactgccccggtaacaacaacagtagtgcctcatggagtgagagaaacatc
cagcagaagggaggagcgggaggaggaggaggagcagggaacatggacaatccttcttca
cctcgttcttctcctctatcctcctcttcttcgcttaatgaatgtgttcagtcaagtggt
ggtgtgtggggctcttccacctcctctcaggtggaggcagggctaggatcagcagcattt
tacaattccaaagtctcccatcttcttcctgggcctcaggagagccctgtgggtggcagc
agtagtgtccatggtgccaattttaatcccaacgtgaacccctccgcctggcctgccctg
gtgcagagtgggacatcaacttcggctagcgacggccttccactacattcgtccattaca
tcagcttcctcgttctctgccagcacccccctcatcaccactcactctccatcatctgtg
aatcaaactggtctccaccagcagcacactgagacagctgtgggaaccaggagtggagaa
gagcagcagcacttaggaagtctagggccggagttgggttcaggtggtggagcacgggga
gccggaccaaatcaagaaggtggcgatgaaagtgactgtggtgttgctagtgttgaagga
gaaggaagtggtaatctttctggctcttctacttcctcctctgctgcctcttcttcttgg
agatccatgcctccagtgtcctctgacctcagtacaggtgcctcacaggcagatggatgg
ggtggaggagggactgtagctcaagggcaggaagggaatgtgtggggctttggtagccag
ggtgacaaggcagggtgggccaggggaaatgatggtggctcaaataccccagtggtatct
cagggagcgtgggaaggaggcagttcagaagcagagtggggtggcacagtgggaggtgta
agttccagtaacttagcaataggaggtggaagaggaggtgatgggagcagcagcagcaac
agcagcagcagtagtggaggcagtggaggtattggtggtagcgttttgcaggactctgcc
tcaccaaagtttgcaactatgacaaaagcatgggacaatcagaaagggatggaaagtggg
gacagtgcagttggggagtgggctggtcaaggtggaggcactggaggtggaggaccctca
gggtctagtggaggagggtccatagctggaagtggtggaggaggcagtgatggtggacaa
aagtcggagggagcctcgtctgcacagaattcccagcagacctccaatgctgaagtggcc
ttactcagcatgctcaatcgatctgacctggaccctagagttctgtctaacacaggctgg
gggcagacccagatccgacagaatgtggcctgggacctggacaccgcacgaggtgtagga
aatagaaatgaaagaaacgcttcatcttcctctgcattctcatcagcaaccatgaacact
actactagtcgcggtcctgggtacccgtctaacaacagttcaataactaatgatctatct
gctagcagtcacacgaccaacctaaactctggccctgctacagttagggatggctgggat
ggggccacacagtccacccctggtcctcacatgcctggtagcaatgtaaggaaaccagga
acgccagaagaagaactggaggacaaccagggaaaggcagctggaggctggggtgatctc
ccacccgagaaacggagcaaagggtgggggaccgaagatcaacaatggggagaacgcaga
ggtagaggagggaactggagagactttggagaacagggtagtgggtgggcagatggtcca
gaggataaacagggcagaacaggaggatggaagggggctggaagaggggaagcaggtggc
tggggaggagactggggacagagagactctatacctggaggtgggagtggtgatgggcga
agtagaggtggaagcaacgctgatgagggatcttcctggggtaatttggaagaaggggga
tctcagcgaggaggatggggaggaggaggaggaggaggaggaggaggaggaggaggagat
gtgggtggaagcaaatcccaccaggactgggggagtgccaagccccacgcagcagcagca
cagataccaaacagccaagtggcaccaatgaaagccccaaatcaacagcagcaccaatca
cagggccagcagccacaaggaggtcccatgcaaggagggtggaacagccggtccaatgtt
ggaggtggaggtccaccatccaagaatcagaaccaaagttcgggctggacctccggcccg
atcccccgaatctctgcaggtgggggggactccctggagcccagtggctgggaagaaccc
tcccctcagtccatcagtcgcaaaatggaaatcgatgatggcacttcagcctggggagac
ccaacccgctacaacagcaagaatgtgaatttgtgggacaaaaaaagtgctacacccgac
caaagccacagtcagcaggccccaccaccaccacccatgcagcagcaaccacctagaagg
cagcaggggatgcagcacagcagggacacaaacactggcaatgctgcagttggtccaggt
atgtggggaggaggtgcacaatctgtggataatggtacggctgcttggggtcagacgaca
gaagcagcaacaggatggggtgagccagatgaatctggaaaaggctctggctgggggaac
ccttcacccaaccctagtaaacctgcagggcctaagtcgatggaaagctggggtgggaag
ggagagggctctgttgcagcctctcgtcaccccagctgggatgaggaagacgatggtggt
ggaggggtctggaacagcactggttcccagggaagcagctcctccttcaactccggaggc
tggggtcagtctcatggaggaaagagaggcaacatcaagagtggcggaggggacagctgg
atgaacccggtgtcacggcagttttcgaacatgggtcttctgggtgatgacccaagtgtt
gacaaaaagatggaaggagagaagagaggaataactgactataacggagagatgcgtagg
ggaggacgaggtggaggaggttaccgcatacctagttccaaagacatgggtcctgttgat
atgggaccctatggtgaaaagatgggtggccatggagtgtttgttggcagtggtggaggg
atgcctccacctcgagggatgcaccagcctggcatgcatccaatgaacccctcccagggg
ttacgtgctcaagtgcctcatcagttcctgtctgctcaggtgccgggtcctatgctgaag
cagatgccttctcctggtggcagcgtgggtggagtggtgggaggagtaggaggtgtcggt
ggtgtcggaagtgtcggcggggtcggtggtgttggtggaggagtgttccctcctcagatt
tccccacagcagctagcaatgctcagcaacatttacccccacatgcagcagttccatctg
gcttgtcagctcttgctgcaacagcagcagcagcagcagcaacagcagcaacttctgcag
aatcagaggaagtttcctcagcctcagcctctcaggcagcagcctgacccacagcagctg
gcaaggattatggctattctgcagcagcaaagacagcatcagcagggtggagttggagga
gcagcaacaggaggagggagctccaaactttccccctctcacctgggaggaggcctgtcc
aaacagcccatggtagacccccttccacatcctggaatggggggaaccttatcagacctt
catgccaaaacgcaagggatgtactccggacttgctcctggtggtaacctgtcaagcctg
gagctcagtcccatgatgggagggatgaaggacacaggaggacagcaatcccgcttcaaa
tggatgatggagggacactccccagctccatctccccctgacacagcccttcacaagaat
ggccctttacccagtgctataaaggtgagaggaggatctccttactcccagtatgaaatg
ctgggtggtgatggtttggggattccccctcaaggctctacagacaactggcaccggacc
cctgggagtaaaatggggaacaagcctgccacatctagctggcctccagagttccagccc
ggtgtgccctggaagggaatccagagtagtggagacccagaatctgacccctacatgacc
cctggtagtgttcttggctccccgggacccccgagcctcaacgactcagaccaccagtta
ctgcgagacaacatagggccaaaccccaccctcaacacctcgctgccttcacctggtgcc
tggccctacagtgcctcagacagtcccctcagcaatgcacacagcacaggaaagtactcg
gagtacaagcccagctggcccccagagcccatcggacaaaacaagttgtggaagaccaat
cgcaacagctcacagctgccacgccctcctcctggcttaactaatcagaaacaggcatcg
tcctccccttggggtagcggaggcccacggttggcccggagctggggagggggcgggatg
aatcaagagtcaagatttgggccaggctcagcttggagcgatggtgttgcctccagaggc
agctgctggttgctgctgagcaacctgacccctcagattgatggctccacactgaggact
atctgcatgcagcatggccccctgctgaccttccaccttggtctgacccagggcagcgct
ctgattcgctacaacagccggcaggaagcagccaaggcccagggtgcactgcacatgtgc
gttctgggcaacaccacaatcctggcggagtttgtgagtgaggacgaagttgctcgctat
tttgcacattcccaggccggaggggcagaggggcccggttcaggaggggcagcggccggc
ggaacgcagggttcatctggaacaggcacaactgtggccagcagtggaggtagctccccg
gggaatgagcgagcaccagcgggcacaacaggtggaaatggaagtggtggtggtggagga
ggggaaagcggcgcagcggttctaggtagcgtgaggtcctctggctctgcctggcagagt
ctcgatggtacaggtagttcttcagaaacttcttcagcccaaggacctgggctgggaata
ttttcccaatggagcaccaatggggcaggggagggaggaggtgttggcggagtagagtct
gggaggtctgggctctgggggggcatgactgcgggataccccagcagcagcctgtggggg
gcaccgcaaatggaggaaaggcaccaaatggacagccccgcagcattgttgcctggcgac
ctgctggggggaggagctgattctatctga
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integrated database retrieval system
