Larimichthys crocea (large yellow croaker): 104932823
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Entry
104932823 CDS
T04659
Symbol
myo5c
Name
(RefSeq) unconventional myosin-Vc isoform X1
KO
K10357
myosin V
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
104932823 (myo5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lco03019
]
104932823 (myo5c)
04131 Membrane trafficking [BR:
lco04131
]
104932823 (myo5c)
03029 Mitochondrial biogenesis [BR:
lco03029
]
104932823 (myo5c)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lco04812
]
104932823 (myo5c)
Messenger RNA biogenesis [BR:
lco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
104932823 (myo5c)
mRNA cycle factors
P-body specific factors
104932823 (myo5c)
Membrane trafficking [BR:
lco04131
]
Others
Actin-binding proteins
Myosins
104932823 (myo5c)
Mitochondrial biogenesis [BR:
lco03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
104932823 (myo5c)
Cytoskeleton proteins [BR:
lco04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
104932823 (myo5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Csm1_N
Motif
Other DBs
NCBI-GeneID:
104932823
NCBI-ProteinID:
XP_027128897
LinkDB
All DBs
Position
XXI:14972112..14984696
Genome browser
AA seq
1741 aa
AA seq
DB search
MALLELYTQYNRVWIPDAESVWKSAEIKRDFHFGDTTLQLLLEDGTEHDYPVDPSKPQLP
PLRNPDILVGENDLTALSYLHEPAVLHNLKVRFVESRIIYTYCGIILVAVNPYKQLHIYG
DAIIHAYSGQNMGDMDPHIFAVAEEAYKQMARNHKNQSIIVSGESGAGKTVSARYAMRYF
AVVSKSGSKTRVEDKVLASNPVTEAIGNAKTTRNDNSSRFGKYTEISFDKRYRIIGANMR
TYLLEKSRVVFQADNERNYHIFYQLCSCAHLPEFKNLRLLSADKFQYTCMGGEITIEGVD
DEKDMEETRRTFSLLGLKEDFQLDVFKVLAAVLHLGNVEIRNSGDKSSVPPSDPHLQVFC
ELLDVSLEELVRWLCHRRIVLVAETVVKPVPKKRAVNARDALAKQIYAHLFDCIINRINR
ALQVPGKQHAFIGVLDIYGFETFDINSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKED
IPWTLIDFYDNQPVIDLIEAKMGILDLLDEECLFPQGTDQSWLQKLFNYLEANPLFEKPR
LSNEAFVIQHFADKVEYQCRGFLEKNRDALYEELVDIMRASKFPFLANFFQEEERNTANS
KGIKVRPARPGVKPANKQLRTSVGDKFCSSLSLLMETLNATTPHYVRCIKPNDEKLPFEY
DSRRVVQQLRACGVLETIRISAQSYPSRWTYIEFYSRYSILMSHQEADRSDKKQTCKNVL
QRLIQDPNQYKFGRTKIFFRAGQVAYLEKLRLDRLRGACVTIQKHVRGWSQRRKYLRMRQ
AAIILQEYIRGKRTIRKTVSAATLKQGWASVVIQRHWRGYRMRQIYLVVRVASITIQAFT
RGWMARKRYKKMMEEQKALVLQKYARAWLARRRFQTMRRLVINVQLSYRVQQLRKKIEEQ
NKENRGLMERLTSLANSHAQNMDRVQGLEAQLEKLTNQKASLEAKEKKGKEDTTLIIAQL
QKETHALNLEKQNLEKKFEASTKEAKESFDQIKRNLLEEKEYEARLRKIAENNIEIHKQD
HEKEVETLKEEIKRLKEERVSLLRKIEEGGQVNSDLQEQVVQLTKHVKVIPELRRDLSNL
QNQRSNMDRRMKEHSEQARAKMNDITRQLLGGVVEEEVLLGLAPDNSEKIYEVEDLLEAF
DRLQKATKILENHQREQKENYETQVEGFKLKVDHLQNENSELQKLFQEKSNINEKIHQEV
SRLSNDNLVIPELKLQVSELLRQKQELEVHVEEQKTELEEKTEEITSVLQRKIKEESSKR
RHFEEKSEELEELKRELQGQVEELKEENDHLKRHQQMESEAKSKLRQETSRLTAENMDFE
EQLDQKDRLIKRLQNQIKSLETSQKVKQTSTPATSKDYLGMLEYKRDDEHKLIQNIILDL
KPKGVVVNMIPGLPAYILFMCIRHADYLNDEAKLQSLMNATIGAVKKVIMSHHKDFELLS
FWLSNTCQLLNCLKQYSGEEEFMKQNTPRQKKNCLQNFDLSEHRQILSDLAIHIYHQFIT
IMEKSLNPAIVPGMLEHESLQGISSMKPTGFRKRSNSIYEDTEAYTISSIIQELSVFHSI
MNQHGMEQGLIKQAVKQLFFLVGATTLNNMMLRKDMCSCRKGMQIRCNISYLEEWLKEKE
LQSSNAMDTLRPLSQAAWLLQVNKSTDDDAKEITEKCTELNPVQIVKILNSYTPIDDFEK
RVTSSFVRKVQSLLQDRDGSTQLMLDSDYRFQVTFPYSPSSQALELLQVPNSLHLGFLTR
M
NT seq
5226 nt
NT seq
+upstream
nt +downstream
nt
atggctttgttggaactatacacacagtacaacagagtgtggataccagatgcagaatct
gtgtggaaatcggccgagattaagagagactttcattttggagacactactctccagttg
cttcttgaagatggcaccgagcacgactaccctgttgacccatcaaaacctcaactccct
cctcttcgcaacccggacatcttggtcggggagaacgacctcaccgctctcagctacctg
catgaacctgcagtcctgcacaatctcaaagtgcgatttgtggagtccagaatcatctac
acctactgcggtatcatactggtggctgtaaatccatacaaacagcttcatatctatgga
gatgcaatcattcatgcctactcaggccagaacatgggagacatggaccctcatatattt
gcagtggcagaggaggcttacaaacagatggccagaaaccacaagaaccagtctatcatc
gtcagtggtgaatctggagccggtaaaacagtgtctgctcgatacgctatgagatacttt
gctgttgtaagcaagtctggaagtaagactcgagttgaagacaaagtcctggcatccaat
ccagttacagaggcaatagggaatgcaaagactaccaggaatgacaacagcagccgtttt
gggaagtacacagagatcagcttcgacaagaggtaccggatcatcggagcaaacatgagg
acctatctcttagagaaatccagagttgtttttcaggcagacaacgagcgaaactatcac
atattctaccagctgtgctcctgcgctcacctgccagagttcaagaatctaagactgttg
agtgcagataaattccagtacacctgcatgggcggagagattaccattgaaggtgtagat
gatgagaaagacatggaggagacacgacggaccttctcactgctggggttgaaggaggac
ttccagttagatgtgttcaaagtcttggcggccgttctgcatttgggaaatgtggaaatc
agaaactctggtgacaaatcatcagttcctcccagtgatccacacctacaagtcttttgt
gagttgctggatgtgagcttagaggagttggtgcgttggctgtgccatcggaggatcgtt
ctggtagccgagacagtggtgaagccggtgcccaagaagcgggcagtaaatgctagagat
gccctcgccaaacagatctacgcccatctgtttgactgcattattaacaggataaacaga
gcactgcaggttccaggaaagcaacacgctttcatcggcgttctggacatttatggcttt
gagacgtttgacatcaacagctttgagcagttttgtatcaactatgcaaatgaaaagctc
caacagcagtttaacttgcatgtgttcaagctggagcaggaggaatacatgaaagaggac
atcccttggacgctgattgatttctacgacaatcagccggtcattgacctgattgaggca
aagatggggatccttgacttgcttgatgaagaatgtttgtttcctcagggcaccgaccaa
agctggctgcaaaagctgttcaactacctcgaagccaatcctctgtttgagaagcccagg
ttatcaaatgaggcgtttgtgattcaacattttgcagacaaggtggaatatcagtgcagg
ggttttcttgaaaagaacagagacgctctctatgaagaacttgttgacattatgagagcc
agtaagtttccttttctggccaactttttccaagaggaggagcgaaacactgcaaacagt
aaaggtatcaaagtgaggcccgccaggcctggagtgaaaccagccaataaacagctgaga
acctctgtgggagataagttctgcagctcgctctctttactgatggaaactctgaatgct
accacccctcactatgtgcgctgcattaagcccaatgatgaaaaacttccgtttgagtat
gactccaggagggtggtgcagcagttgcgagcctgtggagtccttgaaactattcgtatc
agcgcacagagctatccttccaggtggacatacattgagttttatagccgatacagtatc
ctgatgtcacatcaggaggcggaccgaagcgataagaaacagacctgcaaaaacgtcctg
cagaggttaattcaggatcccaaccagtacaagtttggtaggactaagattttcttccga
gccggtcaggtagcttatcttgagaagttgcggctggaccggctgagaggagcctgcgtg
accatccagaaacacgtccgaggttggagccagaggaggaagtacctgcgcatgagacag
gcagcaatcatcctccaagagtacatccgtggaaagaggacaatccgtaaaacagtgagt
gcagcgactctgaagcagggctgggcatcagtggtgatccagagacactggagaggctat
cgcatgagacagatctatctggtagtccgtgtggcctccatcaccatccaggccttcaca
cgaggttggatggcacgtaaacggtacaagaagatgatggaggagcaaaaagccctggtt
ctacagaagtatgccagagcgtggctggcacgacggcgatttcaaaccatgcgtcggctg
gtgattaatgttcagctctcttacagggtgcagcagctcagaaagaagattgaagagcag
aacaaagagaaccgtggattgatggaaagactgacaagcttggccaactcccacgctcaa
aacatggatagggttcagggtctggaggcacagctggaaaaattaaccaaccagaaggca
tctttggaggcaaaagagaagaaagggaaagaagatactactctgataattgcacagctt
caaaaggaaacacatgcattaaaccttgaaaagcagaacttggagaaaaagtttgaagct
tcaaccaaagaggccaaagaaagctttgatcaaataaagaggaatcttctggaagagaaa
gaatatgaagcaaggcttagaaagattgcagagaacaacattgagatccataaacaggac
cacgagaaggaggtggaaactctgaaagaggagataaagagactgaaagaagagcgagtc
agtctgctgagaaagatagaggaggggggccaggtgaactctgacctgcaggaacaggtc
gtccagctcaccaaacatgtcaaggtcatccccgagctacgcagagatctcagcaacctt
caaaatcagagaagtaacatggaccgaaggatgaaggaacactcggaacaagctagagct
aaaatgaacgatattacgagacaacttcttggtggtgttgttgaagaggaggttcttttg
gggcttgctccagacaactctgagaagatttatgaagtcgaagatcttctggaagccttt
gatcgcctacagaaagccaccaaaatactggaaaaccaccagagggagcaaaaggaaaac
tacgagacacaagtggagggcttcaaattgaaagtggaccaccttcaaaatgagaacagc
gagttgcaaaagctgttccaggagaaaagtaacatcaacgagaagattcaccaagaagtg
tccaggctcagcaatgacaacttggttataccggagctgaaactgcaggtttcagagctg
ctgaggcaaaaacaagaattggaggtccatgtagaagagcagaagacagaacttgaagaa
aaaactgaggagatcacgagcgttcttcaaaggaaaattaaagaagagagctcaaaacgc
agacactttgaggagaaatccgaagagctggaggagttgaagagggagcttcaaggacaa
gtagaagagctgaaagaggagaatgatcacttgaagagacaccagcagatggagagcgaa
gccaagagcaaactgagacaggagacctcacggttaactgctgagaatatggactttgaa
gagcagcttgaccagaaagacagattaataaagaggctgcagaatcaaattaagagtctg
gaaacatcacagaaagtgaagcaaacatccacgcctgcaacttccaaagattacctcggc
atgttggagtacaagagagatgatgaacacaaactcattcagaacatcattctggacctg
aaacccaaaggtgtggtggtcaatatgatcccgggtctgccagcttacatcctcttcatg
tgcatccgccatgctgactacctgaacgatgaagccaaactccagtctcttatgaatgca
accatcggtgctgttaaaaaagtcatcatgagtcaccacaaagacttcgagttgctttca
ttctggctctccaacacgtgtcagctgctcaactgtttgaagcagtacagcggtgaggag
gagttcatgaaacaaaatactcctcgtcagaagaagaactgcttgcagaatttcgatttg
tccgaacacagacagattctcagcgacctggccatccacatataccaccagtttataacg
atcatggagaagagcctcaaccctgcaattgtacctggtatgttggagcacgagagttta
caggggatttccagcatgaagccgacgggcttcaggaagcgctccaacagcatctacgag
gacacagaggcgtacaccatctcctccatcattcaggaactcagcgtcttccactccatc
atgaatcagcacggcatggagcagggcctcatcaaacaagctgtcaaacaattgttcttc
ctggttggtgcgaccactctcaacaacatgatgctccgtaaagatatgtgttcctgcagg
aaagggatgcaaatcaggtgcaacatcagttatctggaggagtggctgaaggagaaggag
ctgcagagctctaatgctatggacactttgagacctttatctcaggccgcctggctactg
caagtgaacaagtccactgacgacgacgccaaggagatcactgaaaaatgcaccgaactc
aaccccgttcagattgtcaagattttgaactcctacacacccatcgatgatttcgagaaa
agagtgacgtcgtcgtttgtccgcaaagttcagtcattactccaagatcgtgacgggtcc
acgcagctgatgttggactcagattatcgtttccaggtcacgtttccttacagcccatcc
tcacaggctctggagctgctgcaggtgcccaacagtcttcatctgggtttcctcaccaga
atgtga
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integrated database retrieval system
