Larimichthys crocea (large yellow croaker): 104932906
Help
Entry
104932906 CDS
T04659
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03013
Nucleocytoplasmic transport
lco03015
mRNA surveillance pathway
lco03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104932906
09122 Translation
03013 Nucleocytoplasmic transport
104932906
03015 mRNA surveillance pathway
104932906
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lco03019
]
104932906
03041 Spliceosome [BR:
lco03041
]
104932906
Messenger RNA biogenesis [BR:
lco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
104932906
Spliceosome [BR:
lco03041
]
Complex C
Other components
EJC/TREX
104932906
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
RRM_1
Motif
Other DBs
NCBI-GeneID:
104932906
NCBI-ProteinID:
XP_027134969
LinkDB
All DBs
Position
I:complement(10206760..10227676)
Genome browser
AA seq
1197 aa
AA seq
DB search
MADEDITLDGKPLQSLRVADLKAALEQRNLPKSGQKNTLVKRLKGALMLENLQKSSSSHS
GLQPNSQIGEEMSQNSFIKQYLATQQELLRQRLEREAQRDEEADESPAVPEEDEDHSEDN
DSSSYVSDKHRSIPSQHSMNRAEEKRGESVIGHSLMAGDPGIGPGPTLHPHESLEAPGAR
MQRSTFHQGHKEPPAPSPPRAVASLSVRVLGQPDRQGLPPAVSRAQEKEGTAPSEPGSAH
PVLHLSRSAGVSAGGHVHEDNDEDDSGDDESEDDEDWGPGPGGARRGNRAPPQPQQMPPS
VPSTVARSKRKLQLPQHIPPPQAHHTPMQLRHPTPPPSPPPDLFPLPDTPKQSPPDTDDQ
EGEGPEAARGSRGAPFPPSTLQRQDSDSSSRSSSPEPPVKRRPGPLSLLVHKMESEGAFR
AVAATSAVDKSGETARSTAGPATSSESPLHKLERKRLHDNREVEEAKRLKEEKEREQRKI
QEQEKEKKRLDEEKEKERKRLEAEKEKERKRRDEEKQREEKLQKEKTQKTTIKDKVAVQD
SGSSSDSDSKSDSSSNSSQSSSSSSGDKARPASHLKKADRGQEAEDEKKTNLSKEVEKRY
LSKREVSEPSAATVTEVEPDSESSMAQQPPSGAEPDNNEGRLEESTTPKAFAARKISLTS
SKTSPGATDGGAGDADTGTAAGRKRRWGSSTSVTAKKPSISITTDSLKSLIPDIKVNQEA
VVELHPEELQLSGDEESLDASRGDQDKGLKIRRTVTQVVPGDNQENGQTNEEEEEVEKPE
KEKQRRTSRDKRKNSVSEEALETQTSVKLDGEAKKVTPSESLVRRSISQQKSGVSVTIDD
PVRTTSQPSPSQAKISNIIHVTNLVRPFTLGQLKELLNRTGVVMEEGFWIDKIKSHCFVT
YTTTKEAFASRAALHGVKWPQSNPKVLSVEFCEQAELDFHKGVLKPEKEEEPAAPLIAPQ
PRLPPLMPERENRDRERDRDRERERDRERDRGMGGVRDLWAEREREMERRERARGEREWD
RDKVREFARPGEDGQRSRSRDRERRRRERAKSKERKTDKKEKGDEPPAKLLDDLFLKTKA
APCIYWLPLTEEQAAQRLLDRTERQKERERRRKEQQEEEDKKREEEKKERLKGREKDGNA
AASGGGGGAAGDRERDRGRDREGDKKRDSGHRPRRPSAGASAGRGSRSRSNPRDRRR
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaagatattacgcttgatggaaaacctctacaatcgctccgagtagcggat
ctgaaagcggcgctggagcagagaaacctgccgaagagcgggcagaaaaacacactcgtc
aagcggctgaagggggctctgatgctggaaaatctccagaagtcgtcgtcctctcacagc
gggctgcagcccaactcacaaataggtgaggagatgagccagaatagcttcataaaacag
tacctggccacacagcaggagctcctacgccagaggctggagagagaagctcagagagat
gaagaagcagacgaaagcccagcagtgccggaggaggatgaagaccattcagaggacaat
gacagctcctcctacgtctccgacaagcatcgctctataccctcccagcactcaatgaac
agggcggaggagaaaagaggggaatcagtcattggtcactcgctgatggcaggcgaccct
ggcattggccctggccctaccctccacccgcatgagtcccttgaggctccaggagctagg
atgcagagatccacctttcatcaaggacataaagagccaccagccccctctcctcctcgc
gctgtagcctccctgtcagtgcgcgtcctgggtcagccagaccgccaggggttgccccct
gccgtatcccgagcccaggagaaggagggcacagcgccgagtgaaccaggatcagctcac
cctgtcctccaccttagccgatctgccggggtctcggcaggaggtcacgtccatgaggac
aatgatgaagatgacagcggtgacgacgaaagcgaggatgacgaggattgggggcccggt
cctggtggggcacgaaggggcaacagagcacctcctcagccgcagcagatgccccccagt
gtgccgtcaacagtggcacgatctaaacgcaaacttcagcttccgcagcacatcccacca
ccacaagcacaccacaccccaatgcagctgcgccaccccacccctcctccctctccacct
cctgatctgtttcccctacctgacaccccgaagcagagcccaccagacacagatgaccag
gaaggagagggccctgaggctgcacgtggttcaaggggtgcgcctttcccaccctccacc
ttgcagaggcaagactctgactcaagctctcgctccagcagtcccgagcctcctgtgaag
cgcaggccagggcccctttctctgctcgtacacaagatggagtcagagggggctttccgt
gcagtagcggccacctcagctgtagataagtcaggagagacagcacgctccactgctggg
cctgccacttccagtgaatctccactgcacaaactggagagaaagaggctacacgataac
agagaggtggaggaagctaagcgtctgaaggaggagaaggagagagaacaaaggaagata
caagaacaggagaaagagaagaaacgcttggacgaggagaaggaaaaggagaggaaacgc
ctggaagcggaaaaagaaaaagagaggaaacgccgggatgaggagaagcaaagagaggag
aaactgcaaaaggagaagacccagaagacaaccattaaagacaaggtggctgtccaagat
tcaggttcctcatcagattctgactccaaatcagactcctcgtcaaactcatcacagtcc
tcctcctcttcctccggagataaagcccggcctgccagccatctgaagaaagcagaccga
ggacaagaagcagaggatgagaaaaagactaacctgagtaaagaggtagagaaacgatac
ctttcaaaaagggaggtgtctgagcccagcgcggccaccgtgacagaggtggaacccgac
tcggagagctccatggcccagcagccgccctccggggctgagccggacaacaacgagggc
cgcctggaggagagcaccactcctaaggctttcgctgcccgcaagatatccctgaccagc
agtaagacgtctccaggtgccaccgacggaggagcaggagatgccgacacaggaaccgcg
gcagggaggaagaggcggtggggctccagcacgtcggtcaccgctaagaaaccatccatc
agcatcaccactgactcactgaagtctttgatcccagacatcaaagtgaaccaggaggcg
gtggtggagctgcacccagaggagctgcaactgtctggggacgaggagagcttggacgcc
agccggggcgaccaggacaaaggcctcaagatccgacgcaccgtcacacaggtcgtccca
ggtgacaaccaggagaacggacagacgaacgaggaagaggaagaggtggagaaaccggag
aaggaaaaacaacgcaggacttccagagacaagaggaagaacagtgtttctgaggaagcc
ttggaaacgcagacctctgtcaagctcgatggagaggcaaagaaagttacccccagcgag
agtctggtgcgtcgctccataagtcaacagaagtctggcgtgtccgtcaccatcgacgac
cccgtccgcacaaccagtcagccgtcgccgtctcaagccaaaatctcaaatatcatccac
gtgactaacctggtgcgacccttcaccctcggccaactcaaagagctgctgaaccggacg
ggcgtcgtgatggaagaaggcttctggatcgacaagatcaagtctcactgcttcgtcaca
tacacgacaacgaaggaggctttcgccagcagagccgccctgcacggggtcaaatggcct
cagagcaaccccaaggtcctcagcgtggagttctgcgaacaggctgagctggactttcac
aaaggtgtgctgaagccagaaaaggaggaggaacctgctgccccgctgatcgctcctcag
ccccggcttccccctctgatgcccgagcgagagaaccgggacagagaacgagaccgagac
agggagagggagcgtgaccgcgaacgcgaccgcggcatgggaggagtgcgggacctgtgg
gcggagcgggagagagagatggagcggcgggaacgtgcccgcggcgagcgggaatgggac
cgggacaaagtgcgggagtttgcaagaccgggagaggacggacaacgatctcgatctaga
gatagagagcggaggaggagggagagggccaagagcaaggagaggaagacggataagaag
gagaaaggagacgagcctccggccaaactgctcgatgacttgttcctcaagaccaaagca
gctccatgtatatactggctccccctcaccgaggagcaggcggcgcagaggcttttggac
cgcacagagcgccagaaggagcgcgagcgaaggcgcaaggagcagcaagaggaggaggac
aagaagcgcgaggaggagaagaaagagaggctaaagggccgggagaaagacggcaacgcg
gcggcgagcggcggcggaggaggcgcagccggagacagagagagggaccgcggccgcgac
agagagggagacaagaagagggacagcggacaccggcccagacgtccttcggcgggcgcc
agcgccggacggggctcccgtagtcgtagcaaccccagggacagacgccgctga
DBGET
integrated database retrieval system
