Larimichthys crocea (large yellow croaker): 104932928
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Entry
104932928 CDS
T04659
Symbol
poln
Name
(RefSeq) DNA polymerase nu isoform X1
KO
K16618
DNA polymerase nu [EC:
2.7.7.7
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
104932928 (poln)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lco03400
]
104932928 (poln)
Enzymes [BR:
lco01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
104932928 (poln)
DNA repair and recombination proteins [BR:
lco03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
A-family DNA polymerase
104932928 (poln)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
DNA_pol_P_Exo
Motif
Other DBs
NCBI-GeneID:
104932928
NCBI-ProteinID:
XP_019127142
LinkDB
All DBs
Position
I:10401630..10464851
Genome browser
AA seq
1472 aa
AA seq
DB search
MEQSNSRLYSGPLSQAAQMILAVLRSQSLQAGRRNHSYSYNHRQIVERYYGSQRELPAPS
SWTRSQEESRDADRQWSRPQVFSSSDRWQSSQTCYRSSQTPDFPRSSQVSSCSSSSCWDS
SRQRPPSQTEAYYQHSQICCHREYSEPPAYQSGQSLPFPQHEVTETAASFSTLSPKIPER
QATPWRNLSFHSRSCTEEIRPSFIRALSLHDGVLEDVLLPNTHEGEPSSLACQPLSSSFK
ASERTRDDIAGAREEKKVAESWNVPTNELEEAVGSDGREKWKLTPSNPAGGEDRGLRHQQ
PQCETIKTRGIHQTLGGSVTTQETCCDACLPRPMRNLVGEERMELIADSESTRQMSNTGQ
EIQVDELRRGPTLLNETESVSEMAGVWLLTTNKKTSSESSGSAMDKFFDCDTEREKLREC
TVKTPQIEEVEPGKMSVRCHGRSPKKIPDHKLSRQAENPQDPKHHREISLVQREIKLVLG
DNTADNPERATDEKIAGTEDKTERESHICSDIQPRERWCEAGESGRDRDESVNPPVDSNE
FIATEDSGGESGSEPLFQECGVKRSGFRAPCLHGNHQHHDNVQTANGSIRGSSSSVALAP
ISTPAAGHHSSSAQELSSNVIKASKKQENITLPISITNPHHPRLIPSFPLKRKLEIHQHQ
NAYPPPKIYLTRRPPKWEPPHYSQDKTGERGINELERASIAELPAVPPEPQTKVSPSHKT
GDVLGVQKDPNASKQTPQIRQTKLEERSSKHGSCSVVGKPFKHKRAKCEAAQGTSGPEIS
HAAADVSEPQNQPKASCLSGTLTSDARIKDSGKLNPGEKMQMLEKAGKAKALVLTLVYQD
GTTQLDPEQKLGPPVCGLLALMKSDLDCSTPEDPLGPNDSLVYLKLEHTPAWAQQHAHTS
QEHFTRDVLLQVLSRSQPVVCYKAKDFLRTALQFYRRDLSWKRVAGCLIQDPQVSGWLLD
PANPSSCYQDLLNKHSKRPPTTSALGVKKVSRVISGLCSLFWLNMELCSKLQSQGLWELY
SDMELNMISVLAAMESHRIHVDKEALKRTSDLLGTKMKQLEQEAHRAAGQMFLVTSNTQL
RTVLFEKLCLHERCENKKLPKTVNKQQQSTSEAALLQLQDLHPLPKIILEYRQVHKIKST
FVDGILSCMMSKNYISSTWCQTSVVTGRISAKHPNFQALPRQPLQITKKQYIQGKEEEVV
TVHPRAMFIPQEGWTFLAADFCQVELRLLAHLSADPELLRIFTHPQADVFTMLASQWKGV
SEGEVTSEDREHAKRVVYSVVYGAGRERLSGILGVSAEQASRFQDSFLQTYREVQAFIQR
TVQKCHNQGYVLSIMGRRRTLPNINSPNWGVRMQAERQAVNFVVQGSAADLCKMAMIRIF
NLVSTSSSLSARLIAQLHDELLYEVEDSQVERFAALVKSTMESLQHIDHLGVHLKVPLKV
AVSSGKSWGSMSELHIPPSSPSSSLSLPSPLH
NT seq
4419 nt
NT seq
+upstream
nt +downstream
nt
atggagcagtctaacagcaggttgtactcaggacctctgtcccaggcggcccagatgatc
ctggctgtactgcggtcccagagtctgcaggcaggcagacgcaaccacagctactcctac
aatcacaggcaaatagtggagaggtattatggtagccagagggagcttccggctccgagc
agctggaccaggagtcaggaggagagcagagacgcagaccgacaatggtccaggcctcag
gtattttcctcctccgaccggtggcagagctctcagacctgttatcggtcctcgcagaca
ccagacttcccccgttcatcccaggtctcatcctgttcctcctcctcctgctgggattcc
tctcgccaaaggccgccatctcagactgaagcctattatcagcactcgcagatttgttgc
cacagagagtactctgagccccctgcttaccagtccggccagtctctgcctttccctcag
catgaggtgactgagacagcagcgtctttctccaccctgtcccctaaaataccggaacgt
caagccacaccatggagaaatctgtcttttcactcccgtagctgcacagaagaaatcagg
ccatctttcatccgcgctctttctctgcacgacggggttcttgaggatgtactgttgcct
aatacccatgaaggggagccttcttctttggcttgccagccactttcatccagctttaaa
gccagtgaaaggactcgtgatgacatagcaggtgcacgggaagaaaagaaagttgcagag
agctggaacgtccccacgaatgaacttgaagaggctgtaggttcagacggtcgagaaaaa
tggaagcttactccctccaaccccgctggaggagaagatagaggcctgcgacatcaacaa
ccacagtgcgaaacaatcaagactagagggatacatcagactctcggtggctctgtcacg
acgcaggagacctgctgcgatgcatgtttaccaaggccgatgagaaatctagttggggag
gagaggatggagctcatagcggattcagaaagtacaagacaaatgtcaaacacaggacag
gaaatacaggtagatgagttacgtaggggtccaactctgctaaatgaaacagagtcagtc
agtgaaatggcaggagtttggctcttgacaaccaataagaagactagttcagagagcagt
ggaagtgcaatggacaaattctttgactgtgatactgaaagagaaaagctaagggagtgc
acggttaaaacacctcaaatcgaagaagttgaacctggcaagatgtcagtgagatgtcat
ggtcgaagtccaaaaaagatcccagaccacaagttgagccgccaagctgaaaaccctcag
gacccgaagcaccacagagagatctcactggtgcagcgtgagatcaaattagtcctgggt
gacaacacggctgataacccggagagagccacagacgagaaaatagctgggacagaagat
aagacggagagagaatcacacatttgttctgacatccaaccaagagagagatggtgtgag
gcaggagagagtggcagagacagagatgagtcagtgaatccacctgtggacagtaatgag
tttatagctacagaggactcgggtggagaaagtggttcggagccgttgttccaggagtgc
ggggtaaaaaggtcggggttcagagctccctgtctccatgggaaccaccagcaccatgac
aatgtacaaactgctaatggaagtatcagagggagcagctcaagcgtggcactggccccg
ataagcactcctgctgccggacatcactcctcctctgcacaggagttgtcctcaaatgtc
ataaaagcgagcaaaaaacaggaaaacatcaccctacctatttccataactaatccacat
caccctcgcctcatcccctccttccccttaaagaggaagcttgaaattcatcagcaccaa
aatgcttacccccctcctaaaatctacctcaccagacgtcctccaaaatgggagccacct
cattactcacaagataagacaggggaaaggggaattaacgagctggagagagcatcaatc
gctgaactcccagctgtacccccagaacctcagactaaagtcagtccttcacataaaaca
ggagacgtgttaggggtacaaaaagacccaaatgcctcaaagcaaactccacaaatccgg
cagactaagttggaagaaaggtcttcgaaacacggctcatgttctgtggtcggtaagcca
ttcaagcacaagcgggccaaatgtgaggctgcccagggaacaagtgggccagaaatttcc
cacgcggcggctgatgttagtgagccccagaaccaacccaaagctagctgtctgagtgga
accctgacatccgatgccagaataaaggattctgggaaactgaacccaggtgagaagatg
caaatgcttgagaaggctggaaaggccaaagcgctggtgctaaccttggtgtaccaagac
ggaacaactcagttagacccagagcagaagctcggtccgccagtgtgtggcctcctcgcg
ctgatgaagagcgatctcgactgcagcacgccagaggacccgctcgggccgaacgacagt
ctggtctacttaaaattagagcacacacctgcatgggcccagcaacacgcacacacgagc
caggagcactttactagagatgtgctgctacaagtgctgtcaagatctcaaccggtggtg
tgctataaagccaaggatttccttcgtacagctctgcagttttacagacgagacctcagc
tggaaacgagtggctggctgccttatccaggacccgcaggtgtcggggtggctactagat
cctgcgaatccctcctcttgttaccaggaccttctcaataaacacagcaaaagaccccct
acgacatctgccctgggtgtcaagaaggtttctcgggtcatctcaggtctctgttctctc
ttctggctgaacatggagctatgctccaaactacagagccaggggctgtgggagctgtac
tcggacatggagctgaacatgatctctgttctagcagccatggagagccatcgtatccat
gtggacaaagaagctcttaagagaacttcagacctgctggggactaagatgaagcagttg
gagcaggaggcccaccgagcagctggacagatgttcctggtcaccagcaacactcagcta
cgaacagttctgttcgagaaactgtgcctccacgagcgctgcgagaacaagaaactcccc
aagaccgtcaacaaacaacagcagtcgacatcagaagctgcattgttgcagcttcaggac
ctgcaccctctgccaaagatcattctagagtacagacaggtccacaaaatcaagtcgact
tttgtcgatgggattctctcgtgcatgatgagcaagaactacatttcctctacgtggtgc
cagacaagtgtggtgacgggaagaatctcagccaagcacccaaacttccaggctctgccg
agacagccacttcaaatcaccaagaagcagtacatccaaggaaaggaagaggaggtggtg
actgtgcatcctcgggcaatgttcattcctcaggaaggatggacttttctcgctgcagac
ttctgccaggtggagctgcgtctgctggctcacctctccgctgaccctgagctgctccgc
atcttcacccacccgcaggcagatgtctttaccatgttggcctctcagtggaaaggggtg
agtgagggcgaggtgacttctgaggatcgggagcatgccaaacgtgttgtctactccgtt
gtgtacggggcaggtcgtgagcgtctgtcagggattctcggggtgagtgcggagcaggcc
agccgattccaggacagcttcctccagacctacagagaagtccaggccttcattcagagg
accgtccagaagtgccacaaccaaggttatgtgctctccatcatgggtcgccgacggacc
ctccctaacatcaactctcccaattggggcgtccgcatgcaggctgagaggcaggctgtc
aactttgtggtccaaggttctgctgctgatctctgtaagatggccatgatccgaatcttt
aacctggtctctacctccagctcgctctctgccaggctgatagcacagctccacgacgag
ctgctgtacgaagtggaggactctcaggtggagcggtttgcagctcttgtaaagagcacc
atggagtctcttcaacacatcgaccacctcggagtgcatcttaaggtccctctgaaggtg
gcggtctccagtggcaagtcttggggatccatgtctgagcttcacatccctccatcgtct
ccctcttcatcgctctctctaccttcgcctctgcactga
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integrated database retrieval system
