Larimichthys crocea (large yellow croaker): 104932937
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Entry
104932937 CDS
T04659
Name
(RefSeq) interferon-induced very large GTPase 1
Organism
lco
Larimichthys crocea (large yellow croaker)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
fn3
RHD3_GTPase
Dynamin_N
Ig_DSCAM-DSCAML_C
Interfer-bind
MMR_HSR1
AAA_16
PP_kinase_N
P4Ha_N
RHG29_45_N
Motif
Other DBs
NCBI-GeneID:
104932937
NCBI-ProteinID:
XP_019124597
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Position
XIV:12021117..12039595
Genome browser
AA seq
1768 aa
AA seq
DB search
MAESVPTMESSDEEEFNDTYDSFCEINCEEGENTQPSPQYVPPPGEVTVLSADQETVSLG
LPLADHSVRCTLQIDYSYIQRSSLITQDSGTVKVEGLKPGTEYTFSITRIADNGNRSKAT
TLSVFTEPSPPGNIAVCQVSSESLTVHWEAPAGEVESYIVTCCSEGEIVQELTTETNKLT
LNNLKPGVCYSLQVSAQLKNGRRSKPTSTSARTCTPLESLLENLGLEQHYKDKLSLSRIL
QIDEKTMSDEPAKCKSDLPFYFLKKLMMVNVTARNVKCTSVNESTCDTASEKTGLDFDNL
SDSLHSGDMLNPLDIITALFLCSDGFVQQEMALKMSMCQFSVPLLLPNCDTKQCTLMLWA
LRDIVKKYRPQSLSESKGFIEDRIVVSELPMISFVRLGDCSLSKSEILNKLLSNSQQYHD
TFIHRNMECGNSPKKISNGLAEITWYLPCGNKNMDVFSEPVAVANLRGDIASFETQFSFL
CQTSAAVFVFFDNLDSQCELLTNQNHKAQIFLVGNHQNQNLEALKTLATKLALTKSNILL
KTKSMNDADFVKTMRNTVRDVVEKSKMKMRVEQMVDIAHELGILVDEDSEDCQTAKENAD
AITAEIQDILKYKEDELPLQGQIWKDLTCLEKEEYRLRKVGSKNIEMYKSDLQKEKTILR
ERQNSYDMSKAMTCFINAISNPGIERCYFLKWMRMNLDNLSREKLSVLREQYKKKYNSKN
KEEIKDIDRQLSNSSLGTEHFFREMGQIYEASVSLPETDPSRQQLQHLPKLCAQLLLDGF
PLELVDGDASNIPLRWVSDVLSQLNDLVSPKSKILVVTVLGVQSTGKSTLLNTMFGVQFA
VSSGRCTRGAFMLLIRINEDVKKVLNCDFMMIIDTEGLKSPELAQLDNSHEHDNELATLV
VGLSDITIINIAMENSTEMKDILQIVVHAFLRMKEVGKKPKCQFVHQNVSDVSAHEKNLR
DRKLLLQQLNEMTQAAAKMEKKEENKSFTDVMDYSPDTGNWYIPGLWNGNPPMAPVNAGY
SEAVYELKKNIIHILGSCKSSSNNISDFTEWITSLWTAVKHENFIFSFRNSLVADAYMRL
CTEFNKWEWEFRKEMYTWVTNAETRISNFGTVAEKSEISDMKTFLSEMKSEACTVLSKLE
TKLLENLEQYFKQTEGHLYLVERNKEEFANSAKSLRRNMESSVLNQLKAAADIRQGMTEI
DKIKENHTKQLERRVHRLIDECRKKKFEMTDKELDEEFNKMWNEALEELSCPKQKPSDVI
TSVTYHLRENLSRKGSLYCELLSQKNLKDCGQKPFKCTAEGFYRLTHTFSKFFNIEDHVM
ASQKLADSIINACTEFVTEKIQRKNNYHDTYIQEILRMIDNKLQNSQNVKIETEFEVSLK
QHICADAARQFQKMHEDFIRVNDPYRCLNQNKDKYCADFKDVFHGQDQCQKKADEFTNRC
LRPAVKDFVNRSLGPDIIGEMQTRSEFSTRMSFQYSLLLDLLSKNDFEEYLSYINSYEDY
VKKWILNKILEHFSKITTTFEFEDKHLQSSINSINDAINKAKIEKKGNLKTFVEHVCQEL
GDKLVISQDALGTFMILNNADLEQFAKWLTECVKNMAQAVGEKFKKTDIQMKLKTLHVKP
QNELFTKLIGCGQQCPFCKSPCDAGGQEHKEHFTSLHRPEGLGEFRWIFTGKLVVDICSS
SVCSDTHFRCSATNGERHPYKDYRTIFPDWHIPPDVSLEASDYWKYVLATFNNKFAKEYN
AQPADVPDTWKSITHKQAEESLKKSFNM
NT seq
5307 nt
NT seq
+upstream
nt +downstream
nt
atggctgagagtgtacccacaatggaaagctcagatgaggaggagttcaatgatacatac
gattccttctgtgaaataaactgtgaggaaggagagaacactcaaccatcaccacagtat
gttcctccaccaggagaagtaacagttctgagtgctgaccaggagactgtttctcttggt
ttaccactcgctgatcactctgttaggtgtacactgcaaatagattactcctacatacag
agaagcagtttgatcacacaggactctggcactgtgaaggttgagggactgaaacctggg
actgagtatactttcagcatcacaaggattgcagacaatggaaatcgaagcaaagcaacc
acactatctgtcttcacagagcccagccctcctggtaacattgctgtctgtcaggtcagc
agtgagtcactgactgtgcattgggaggctcctgctggtgaagtggagagttacatcgtg
acttgttgcagtgagggagaaattgtgcaagagttaacaacggagacaaacaaactgact
ctcaacaacctgaagccaggggtgtgttactcgctccaggtctctgcacaacttaagaat
ggaagaagaagcaaaccaacttcaacatctgcacgaacatgcacaccactggagagttta
ttggagaatctgggcttggagcagcactacaaagacaagctatcactgagcagaatactt
cagattgatgagaagaccatgagtgatgaacctgccaagtgtaaatcagatcttccattt
tattttctcaagaaactgatgatggttaatgtgacagctagaaatgtgaaatgtacatct
gtgaatgaatcaacctgtgatactgcatccgaaaagacagggttagattttgataatctg
tctgacagtctacattcaggtgacatgctgaaccctcttgacataatcactgctctcttt
ttgtgttctgatggatttgtacagcaggaaatggcactcaaaatgtctatgtgtcagttt
tctgtgcctctgctgcttcctaattgtgacacaaagcaatgcacactcatgctttgggcc
ttgagagacattgttaaaaagtacagacctcagtcactttcagaatccaagggctttatt
gaagacagaattgttgtctctgaacttccaatgatatcttttgttagactgggtgactgc
tccttgtccaagtcagagatactgaataagcttctgagcaattctcagcagtaccatgac
acctttattcaccgtaacatggagtgtggtaacagtccaaagaaaatatccaatggattg
gctgaaattacttggtaccttccttgtgggaacaaaaacatggatgttttcagtgagcca
gtggctgtagctaaccttcgtggggatattgcttcatttgagacacaattttcctttttg
tgtcagacatctgcagcagtttttgtcttctttgacaatttggactctcagtgtgaactg
ctcactaaccaaaaccacaaggcacagatctttttggtgggtaaccatcaaaatcagaac
ttggaggctctaaaaacactagcaaccaagttggctttaactaagagcaacatcctttta
aagactaagtccatgaatgatgcagactttgtaaaaacaatgcggaacacagtcagggat
gtagttgagaaatcaaagatgaagatgagggttgagcagatggttgacattgcccatgaa
ctgggaatcttggttgatgaagattctgaggattgtcagactgccaaggaaaatgcagat
gccatcacggcagaaattcaagacattctaaaatacaaagaagatgagttacccctgcaa
ggccaaatatggaaggacctgacttgcttagagaaggaagaataccggcttcgaaaagtt
gggtctaaaaacatagaaatgtacaaaagtgatcttcagaaagagaaaacaatactccgg
gaaagacagaattcttatgacatgtcaaaggcaatgacatgtttcatcaatgcaatatca
aatccagggatagagaggtgctatttcctgaaatggatgcgaatgaatcttgataacctc
tctcgagaaaaactgtctgtcctcagggagcagtacaaaaagaaatacaactctaagaac
aaagaggagatcaaagacatcgacagacaactttccaacagctcactggggactgaacac
ttcttccgtgaaatgggtcagatctatgaagcatcagtttctcttccagaaacagaccca
tcacgtcaacaattacagcatctgcccaaactatgtgcacaattgttgcttgatggattt
ccccttgagcttgtagatggagatgcatccaacatacctctcagatgggtgagtgatgtt
ctctctcagctcaatgacttggtgtctcctaagagcaagatattggtagtcacagttctt
ggagttcagagcacaggaaagtccactctcctcaacaccatgtttggagtgcagtttgca
gtcagcagtggtcgatgcactcgaggtgcctttatgttgctcatcagaatcaatgaagat
gttaaaaaagttctcaactgtgacttcatgatgatcattgacactgagggcttaaagtca
ccagagcttgcacaactagacaatagccatgagcacgacaatgagcttgcaacacttgtt
gtggggttgagtgatatcactattatcaatattgcaatggagaattcaacagaaatgaag
gatatcctacaaatagttgtgcatgcctttctcaggatgaaagaggttggcaaaaagccc
aaatgtcagtttgtccaccagaatgtgtcagatgtttcagcacatgagaagaacttacga
gacaggaaactgctcttgcaacagttaaatgagatgacccaagcagcagccaaaatggaa
aagaaagaggagaacaagagtttcactgatgtgatggactacagtccagacactgggaac
tggtacatacctggactctggaatggaaacccaccaatggcaccagtcaatgcagggtac
agtgaggctgtttatgagctcaagaaaaacatcatccacattttgggaagttgtaaatca
tcttcaaataacatatctgactttacagagtggatcacaagcctgtggactgcagtcaag
catgaaaacttcatcttcagcttcagaaacagcctcgtggctgatgcatatatgaggctg
tgcacagaattcaacaaatgggaatgggaattcagaaaagaaatgtacacatgggttaca
aatgcagaaacaagaatttccaactttggcactgttgctgagaaatctgagatatctgac
atgaaaacgtttctcagtgagatgaaaagtgaagcgtgcacagtgctgtctaaattggag
acaaagcttcttgaaaatctggaacagtacttcaagcaaacagagggtcatctctatctt
gttgaaagaaacaaagaggaatttgcaaacagcgcaaagagccttcgacgaaacatggag
agctctgtacttaaccaactcaaagcagcagctgacatcagacagggaatgacagaaatt
gataaaatcaaagagaaccacacaaaacaattagagcggagagtgcatcgactgattgat
gaatgtcggaaaaaaaaatttgagatgacagacaaagagctagatgaagaattcaataag
atgtggaatgaagccctggaagaactatcttgtccaaaacaaaaaccctcagatgtcatc
acaagtgtgacctaccacctgagagaaaatctatcacgtaaggggagtctttattgtgaa
ttattaagtcagaaaaacctgaaagattgtggacagaagcctttcaaatgtacagctgaa
ggattttacagacttacccacacatttagcaagttcttcaacattgaagatcatgtaatg
gcttcacaaaaactagctgacagcatcataaatgcttgcacagagtttgtgactgaaaaa
atacaaagaaaaaacaattaccatgacacttacatccaggagatcctacgcatgattgac
aacaagctacaaaacagtcagaatgttaagatagagactgagtttgaagtttctctaaaa
cagcacatctgtgcagatgcagccagacagttccagaaaatgcacgaagatttcatacgt
gttaatgatccctacagatgtctgaatcaaaacaaagacaagtattgtgctgattttaaa
gatgtgttccatggccaagaccagtgccagaagaaggcagatgaattcacaaaccgctgc
ttgaggcctgcagtcaaagactttgtcaaccgttccttaggtcctgacatcattggtgaa
atgcagacacgctctgagtttagcacacgaatgtccttccagtattcacttttactggat
ttgctttcaaagaatgactttgaagagtatttgagctatattaactcatatgaggattat
gtaaagaaatggatcctcaacaaaatactggaacacttctcaaaaatcactacaacattt
gaatttgaggataaacatctccaatcaagcatcaacagcataaatgatgctatcaacaaa
gccaaaatagagaagaaaggcaacttgaagacatttgttgaacatgtctgtcaggaactt
ggtgacaaactggtcatttcccaggatgctcttggtactttcatgatcctaaacaatgct
gacttggaacagtttgctaaatggctcactgagtgtgtgaagaacatggcacaagctgtt
ggggagaagtttaaaaaaacagatatacaaatgaaattaaaaactcttcatgtgaagcct
cagaacgagcttttcaccaaactgattggatgtggtcaacagtgtccattctgcaaatca
ccttgtgacgcaggaggacaggaacataaagagcacttcacttcactacatcggccagag
ggtctgggtgaatttaggtggatctttacaggcaaacttgtcgttgacatatgcagctcc
tcagtgtgcagtgacacacattttcgctgcagtgccacaaatggtgaacggcacccttat
aaagattacagaacaatcttcccagactggcacattcctccagatgtgagccttgaggca
tcagactactggaaatatgtactggcaacgttcaacaataaatttgccaaagaatacaac
gcacagcctgctgatgttcctgacacttggaaatctatcacacacaagcaggcagaagag
agcctcaaaaagtcatttaatatgtaa
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integrated database retrieval system
