Larimichthys crocea (large yellow croaker): 104932958
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Entry
104932958 CDS
T04659
Symbol
caprin2
Name
(RefSeq) caprin-2 isoform X1
KO
K18744
caprin-2
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lco03019
]
104932958 (caprin2)
Messenger RNA biogenesis [BR:
lco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
104932958 (caprin2)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
C1q
Caprin-1_dimer
Caprin-1_C
Motif
Other DBs
NCBI-GeneID:
104932958
NCBI-ProteinID:
XP_027127852
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Position
XX:complement(5391265..5405496)
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AA seq
916 aa
AA seq
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MVQLSPSPTLDFTTPPECSEEGQDELVMAGSPKVGSPGGLSALQLSLEASTAYQGYDTYI
EDGLICLKHKVRNLEKKKLKLEDYKKRLKQGEALNKDQIAAVEKYDEVLHNLAFAQELHK
TLDGLTQNLLRDQKRLAKKEQVAKAETERRRLSTVLQVQHLLHSLQQEHVRTDLLTGNNQ
APHISAQQLHSLSQLATLLGVRRDTRLSLDEQMEQAAVAYLDLLEGTDKPVAGSTFKLLK
EELTRMLSYKYFSCLPPPPNKSPEVLLSSAHSTTSQSKSSEISKEFFNRLYLTDMATPPI
QNWKEDFQAMREREPPDCWDMEFTDGVASPKAAVHKPWRRAATFIPKVPVTTKKQSAGCK
QRKERRAKGEQHAKLAVHMDMPVEVFNTPSALPKDPVLRKQHLEDLMTKIHGSFSFMQES
LLDGESSPTNGHPRLKRRPSGSPSPLAHTDLRSPGDVLPKTMHSTPLPSRLMERKASLTN
GDPCLETCDLELSPKDLPHEPLQLAEIKKFPSPPLYCRESTISVSLEDKSRPRTPVTESG
EQSPCNGVASCTSTPPQGQSFSTPPTRRTLTSAQFQNIQSVFKVNTSLPQNGELNYKPDS
AVFSEPRYSTASTQTPPEFAPSEDESQSVYQSDYTAGNGGQIFLSPGQSGGSASRPGQSY
YTRGSVRGMARGGKGLAQTFRSSGWHRGGSYIPQAHFRDSGPLLYATRDSGYQHSYRRGG
GRHNSAAWSDSSQVSSPDREGAFTIVDSGHGDSLSVSTLEVPLTPHGHHHTTLLPMQLYP
LSQPLRVAFTASRTANFAPGNLDQPIVFDQLHSNLGEMYDTHIGRFTCPINGTYVFIFHI
LKLAINVPLYINLMRNEEVMVSAYANDGAPDHETASNHAILPLFQGDQVWLRLHRGAIYG
STWKYSTFSGFLLYQD
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagctgtctccatcccctaccctggatttcaccactccacctgagtgctcagag
gaaggacaggacgagctggtgatggccggtagccctaaagtgggctcgcccggtggtctg
agtgctctgcagctcagcctggaggcctccacagcctaccagggctacgacacctacata
gaggacgggctcatctgccttaaacacaaagtccgcaacttggagaaaaagaagctgaaa
cttgaagactacaagaagaggctgaagcagggcgaggcactgaacaaagatcagattgct
gctgtggagaagtacgacgaggtgctgcataacctggcattcgcacaggagctgcacaaa
actctggatggcttgactcagaatttgctgagagaccagaagaggttggcgaagaaggag
caggtggcaaaggcggagacggagaggagacgtctgagcactgtgctccaggttcagcac
ctcctccacagcctgcagcaggagcacgtcaggacagacctgctgaccggaaacaaccag
gcacctcacatctcagcccagcagctgcacagcctgagtcagctcgccaccctgctggga
gtcaggagggatacccgactcagtttagatgagcagatggaacaagcagctgtggcttac
ctggatctgttggaggggaccgacaagccagtggctggatccacattcaagctgttgaaa
gaggagctcaccaggatgttgagctacaagtacttcagttgtcttccacctccacccaac
aagtctccagaggtgttactgagctcagcccacagcaccacatcacagtcaaaatcaagt
gaaatttcgaaggagtttttcaacagactgtacctgactgacatggcgactcctcccatt
cagaactggaaggaggacttccaggccatgagggagcgggagccccctgactgctgggat
atggagttcacagatggcgtcgcctcgcccaaagctgcagtccataaaccgtggagaaga
gctgcaactttcatccccaaagtgccagtcaccaccaagaaacaatctgctggctgcaaa
cagagaaaagagaggagagccaaaggagaacaacatgctaagttggcagttcatatggat
atgcctgtggaggttttcaacactccatctgccttacccaaagaccctgtcctgaggaag
cagcacctagaggacctgatgacaaagatccatggctccttcagtttcatgcaggagtct
cttctggatggagagagctcccccactaatggccacccgagactgaagagacgaccgtct
ggatctccatctcctctggctcacacagacttgagaagcccaggtgatgtcctacccaaa
acaatgcattccaccccactgcctagcaggcttatggagcgcaaagccagtctaacaaat
ggggatccgtgcctggagacctgtgaccttgagctttccccaaaggacctacctcatgag
ccgctgcagctggctgaaataaagaagttcccttcaccaccactgtactgcagggagtca
accatctctgtcagtctagaggacaagagccgtcctcgtacaccagtaactgagtcaggg
gagcagtccccctgtaatggggtggcatcttgcacctccacccctcctcagggacaatct
ttctctacacctcccactagacgaactctgacatctgcacagtttcagaacatccagtca
gtcttcaaggtgaatacctccttacctcagaatggggagctaaactacaaaccagattct
gcagttttctctgagccaaggtacagcactgccagtacccaaacaccacctgagtttgct
ccctcagaagacgaatcacagtcagtgtaccagtcagattatacagcgggtaatggtgga
cagatcttcctgtccccaggccaatcaggtggaagtgcaagtcgaccaggccagtcgtac
tacaccagaggatctgtgagaggtatggcacgtggaggcaaaggactggcacaaaccttt
cgctcttctggttggcatcgaggaggatcctacatcccccaggctcatttcagggattct
gggcctcttctctatgctaccagagactctggataccaacacagctacagacgtggagga
gggaggcataactctgcagcatggagtgactcttcccaggtgagcagtccagaccgggaa
ggagcctttacgattgttgactcgggtcacggagattccctgtccgtttctaccttggaa
gtccctcttactccacacggccaccatcacaccaccctgcttcccatgcaactctacccg
ctctcccagcctctgcgagtggccttcaccgcctctcgcactgccaactttgccccaggg
aacctggaccagcccatcgtatttgaccagcttcacagtaacctgggggagatgtatgac
acccacatcggtcgcttcacctgccccataaatggaacctacgtcttcatcttccacatc
ctgaagcttgccatcaatgtgccgctctacattaatctcatgcgcaacgaggaggtaatg
gtgtcagcgtatgctaacgatggagccccagatcatgagacggcaagcaaccacgccatc
ctgcctcttttccaaggagaccaggtgtggctccggttgcatcgtggtgccatatatggc
agcacctggaagtacagcacgttctctggcttcctactgtatcaggattga
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