Larimichthys crocea (large yellow croaker): 104933018
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Entry
104933018 CDS
T04659
Symbol
rpn1
Name
(RefSeq) dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1
KO
K12666
dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 1 (ribophorin I)
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco00510
N-Glycan biosynthesis
lco00513
Various types of N-glycan biosynthesis
lco01100
Metabolic pathways
lco04141
Protein processing in endoplasmic reticulum
Module
lco_M00072
N-glycosylation by oligosaccharyltransferase
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
104933018 (rpn1)
00513 Various types of N-glycan biosynthesis
104933018 (rpn1)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104933018 (rpn1)
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Motif
Pfam:
Ribophorin_I
DNA_repr_REX1B
GTP-bdg_M
Motif
Other DBs
NCBI-GeneID:
104933018
NCBI-ProteinID:
XP_010746673
UniProt:
A0A0F8AB87
A0ACD3RJA4
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Position
VI:complement(4540320..4545118)
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AA seq
600 aa
AA seq
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MTRKSPLLAACLLLLAALSSEVSADGLVNEEVKRTVDLSTHLAKITAEIVLSNQGHSAVH
SFLLAVEADLAPHLAYIGASVKGDEEEDGTLELQQTTIAGQSGQFYKVQLPSNLAAGAQL
KAKVEMTFSHVLRPFPTQITQAERQLVVFQGNHYLYSPYPTRSQTTRVRLASKTAESYTK
LGNPSKMDEIIEYGPFRDVAPFSEDTMKIHYENNSPFLTISSITRTIEVSHWGNIAVEET
IDLRHTGAVLKGPFSRYDYQRQSDSGISSVKSFKTILPASAQDVYYRDEIGNISTSHLQV
LDDSVEVEVRPRFPLFGGWKTHYIIGYNLPSYEYLYTLGDQYALKMRLVDHVYDDQVIDS
LTVKIILPEGARNIHVDTPYKIDRMPNQLHYTYLDTFGRPVLVATKNNLVEHHIQDVVVH
YNFNKILMLQEPLLVVGAFYILFFTVIIYVRLDFAITKDPAAEVRMKVASITEQVLTLVN
KRLGLYRHMDEVVNRYKQSRDTGALNSGRKTLEADHRTLTNEISSLQARLKAEGSDLADK
VGEVQKLDGQVKELVCRSCQEAERLVAGKVKKEAYIESEKTLTSKRQELVGRIDSLLDAL
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgactcgcaagtctccacttctggccgcctgcctgctgctcctggctgctctgagctcg
gaggtttcagcggacggtttggtgaacgaggaggtgaagaggaccgtggacctgagcacc
catctggccaagatcaccgcggagatcgtgctgtccaaccagggacactctgccgttcat
agcttcttattagcggtggaggctgacctggccccgcacctggcgtacatcggagcctcg
gtgaagggtgatgaggaggaagatggcacacttgaactccaacagacaactatcgcaggt
caaagtgggcagttttacaaagtacagctgccttccaacctggcagcaggtgctcagctg
aaagcgaaggtggagatgacattcagccacgtcctgagacccttccccacacaaatcacc
caggccgagcgccagttggtggtgtttcaggggaaccattacctgtactccccgtacccc
acccgcagccagacaacacgtgtccgcttggcctccaagactgctgagagctacaccaag
ctgggcaaccccagcaagatggatgagatcattgagtacggacccttccgtgacgtggct
ccattcagcgaggatacgatgaagatccactacgaaaacaactcccctttccttaccatc
agtagcattactcgcaccattgaggtctctcactggggtaacattgctgtggaagaaacc
atcgacttgaggcacacaggtgccgtcctgaaggggcctttttcacgttacgattatcag
cgtcagtctgacagtggcatctcatccgtcaagtctttcaagactatccttcctgcttcg
gctcaagatgtctactacagagatgagattggcaacatctccacctcccatctgcaggtt
ctggatgactcagtggaggtggaggtcaggcctcgcttccccttgtttggaggctggaag
acccattacatcatcggctacaatctgcccagctacgaatacctctacaccctgggtgac
cagtatgcactaaagatgaggctagttgaccatgtgtatgatgaccaggtcattgactcc
ctcactgtgaaaattatcctgcctgagggagccagaaacatccacgtggacacaccttat
aaaattgatcgcatgccaaaccagctgcactatacatacctggatacttttggccgacca
gtgctggtcgccaccaagaacaacctggtggagcatcacattcaggatgttgtggttcat
tataacttcaataagatcctgatgctgcaggagcctctcttggtcgtaggagccttctac
atcctcttcttcactgtcatcatctatgtccgcctggactttgccatcacaaaggaccct
gcagctgaagtgcgtatgaaggtggcctccatcactgagcaggtgctgaccctggtcaac
aagcgcctgggtctgtaccggcacatggacgaagtggtcaaccgctacaagcagtcccgc
gacaccggggcgctcaacagcggtcggaaaactctggaggctgaccaccgcactctcacc
aacgagatcagctcactgcaggcccgcctcaaagctgagggctctgacttggctgataag
gtcggggaagtgcagaagctggatggccaggtgaaggagctagtgtgtcgctcctgccag
gaggcggagcggctggtggcgggtaaggtcaagaaggaggcttacatcgagagcgagaag
actctgacaagcaagaggcaagagctcgtcggccgcatcgacagtctgctggacgccctc
taa
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