Larimichthys crocea (large yellow croaker): 104933178
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Entry
104933178 CDS
T04659
Name
(RefSeq) transcription factor SOX-11
KO
K09268
transcription factor SOX11/12 (SOX group C)
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lco03000
]
104933178
Transcription factors [BR:
lco03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
104933178
BRITE hierarchy
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
NOA36
EssA
Autophagy_act_C
Pox_Ag35
FAM176
TPR_TTI1_C
Motif
Other DBs
NCBI-GeneID:
104933178
NCBI-ProteinID:
XP_010746867
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Position
VI:complement(23359095..23360901)
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AA seq
393 aa
AA seq
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MVQHTEHGGPGPNSGSREAADPEESELLAASACSPVPLKPDWCKTASGHIKRPMNAFMVW
SKIERRKIMEQAPDMHNAEISKRLGKRWKMLKDTEKIPFIREAERLRLKHMADYPDYKYR
PKKKPKTEGCAFPAGKSAAPSPEKASVRPGHKSHAAAKKFTKLKPGKPAAGPGRASSHLP
QHQQPDPRYRYVLTTSFKSNKVVKREFTDDEEEDDEEDEEEEEDSEEERELKAEEEDEPS
RYSLAKMPASLSLSSAAEPEGTGVYESSGRLFYSFKNITRQGAGTSSYPVSLSPASSSRS
GSTSSSSCCGEDLDDLPAEGTDFTLSLLTGFHDSSSSSAPGNLSLSLVDKDLEGSEGSLG
SHFDFPDYCTPELSEMIAGDWLEANFTDLVFTY
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggttcagcacacggaacatggcgggccggggccgaacagcggctcccgcgaggcggca
gaccccgaggagagcgagctgctggcggcctcggcgtgcagccccgtgccgctgaagccg
gactggtgtaagaccgcctcgggtcacatcaagcggcccatgaacgccttcatggtgtgg
tccaagatcgagcggaggaagatcatggagcaggcgccggacatgcacaacgcggagatc
tccaagcggctcgggaagcgctggaagatgttgaaggacaccgagaagatcccgttcatc
cgggaggcggagcggctccggctcaagcacatggccgactatccggactacaagtaccgg
cccaagaagaagcccaagaccgaaggctgcgcgtttcctgcggggaagtcggcagctccg
tccccggagaaagccagcgtcagacccggtcataagagccacgccgccgccaagaagttc
accaaactgaagcccgggaagccggcggccggtcccggcagagcgagcagccacctcccg
cagcaccagcagccggacccccggtaccggtacgtgttgaccaccagctttaaaagcaac
aaggtcgttaaacgggagtttaccgacgacgaggaggaggacgacgaggaggacgaggag
gaggaggaggactccgaggaggagcgagagttgaaggcggaggaggaggacgagccgtcc
cggtacagcctcgctaagatgccggccagcctgagcctgagctccgccgcagagccggag
gggaccggcgtgtacgagtcctccggccggctcttctacagcttcaagaacatcacccgg
cagggcgccggcacctcctcatacccggtctccctctcaccagcatcctcgtcccggtcc
ggctccacctcctcctcctcctgctgcggggaggacctggacgacctcccggcggagggc
accgacttcaccctgagcctcctgaccggcttccacgactcgtcgtccagctccgccccg
gggaacctgagcctgtccctggtggacaaagacctggagggcagcgagggcagcctcggc
tcgcacttcgacttcccggactactgcaccccggagctcagcgagatgatcgcgggggac
tggctggaggcgaacttcacggacctggtgttcacgtactga
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