Larimichthys crocea (large yellow croaker): 104933190
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Entry
104933190 CDS
T04659
Name
(RefSeq) receptor-type tyrosine-protein phosphatase beta isoform X1
KO
K05694
receptor-type tyrosine-protein phosphatase beta [EC:
3.1.3.48
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
104933190
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lco01009
]
104933190
Enzymes [BR:
lco01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
104933190
Protein phosphatases and associated proteins [BR:
lco01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
104933190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Fn3_Dep-1_4th
FN3_Tor_3rd
PTP_tm
Pur_ac_phosph_N
Y_phosphatase
Motif
Other DBs
NCBI-GeneID:
104933190
NCBI-ProteinID:
XP_027128017
LinkDB
All DBs
Position
XX:complement(18121587..18152027)
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AA seq
2000 aa
AA seq
DB search
MLKCKVQSSLCCLCFTSLLLLLLDLSAAAPSQGRSLTCNISVSDPVSGLDSISLTVFTPG
RDCLFTLTSADAGGDSGECRRRGGGGDEEIETNEIGGRGRGEDVEVEVETVETAANYLGT
NQLGVEDEGIKEAGEVFTCVLEHLEPGTAYQLQVQSRSGEEATNITLHTKPSAVSGLTVT
SRTCSSLGLSWQAGPGRTERFRLQLWNHADLLRNETLESTATQHTVLGLSPGRLYNVTMV
TEAGGLQNMETMEAQTVPAAASNFTANHRNSTAVLLSWQRPKGDLDALAVAVSTSNGTSL
WETTLPPDATELVVDQLTPGSAYRVAVTSKSGKLTNQSEISIRTAPAAPTLLSLTPASSG
GLLLSWTPPAGLWDNYTLLLLDGSQQVVSAALDREAANYSFAGTELTPGRLFRAVLRVES
GGLTAESSCDGATAPAAVLDLHIRHSDETSLSAMWSDAPGSRDSYFLTIRHGNHTEATRE
VEPNMRECTFNVLTPGRRYTITVTTRSRNLNTSVSLEGRTAPRLLDVISLTNSGLGSLRA
SWSKPFGDVDSYTLTLLQDSVVVQNYSVPVQSSSLLLTGLTPGALYRLQAVTVSGGLQSK
PTSLKGRTAPAAVTEVTVANSGRSDALRVSWHPAVGVVDSYQVRLQDKSQTVHTLTVSRS
SPPECSFSSLVAGRLYSVVIVTRSDSLENATTIQARTQPATVENPSAVHSARDDFLKVSW
RHADGDLDRYVVLIRYNHRVLQNKSISGGHNECSFTHLTPGRLYTVTVETWSGDYVSSVS
FEGRTFPGAVGNLSLGNAGTGELNVTWSPAPGDVEHYEVTLLFNDTRVFPPVSLTNEVRH
HRLTSLTPGRLYKIVVSTFSGPNQRAERIEGRTVPSAVGNLRLDPRPGLTDSVGGLLASW
TPGDGDLDMYVASLSTMDGAALDTRPVPKHVTSLEFLDLVPGNTYTITVQSLSGKLINKN
TATGRTAPARVTALQADNDHTTHSLTVSWERPVGVYDGYRLQLLDEAGVLQANRSVSAES
RSERLEGLTSGKWYRVRVVTLSGGVLSPEATAEGQTRPAAVSNLTVASVNTSSVSFSWRP
SDGHVDNYELSLYSVAEETANQRSRKEHHHHQTGELVDLQKVGPAADRCVFSGLRAGSLY
RLQVVSWSRGMNSDSSVLVRTVPPSVSSLQVQSSGRTDRLTVSWTHGEGSWSSYEVVLYD
LSGPTLGAQTLGAQHTSHMFSGLIPGRLYRSEVITHSGELTNNISAYGRTTPEPPTHLSV
KQGPTNDTIELAWSGPASGDYDTFSLQWTPPDQLSVTQTDLSSRVLGGMFPGRLYNFTVA
TISGGGAKVGPTVTSQPIQRSVRTSPSPLKSIHCFPLSSSSLSCSWSPPSSDFDSYEVEC
RRHDNGELTSALRLAEGVTAVTLDHLEAYRKYSVTVRVSSAGQTSPPATHTTVTMIDRPP
VPPPSVRVSERSSKLTSSSILFRFNCSWFSDANGAVKYFTVIVAESDANEMLQPDQRHPL
PSYRDYINNSSVRAYQTAYFSSRCLQDGDAPAGQVVEVNLGAGGDRLGGACDRYHDDDLY
LSDSYGGFCDGPLKAKSSYRLSVRAFTRLFDENHREVSQPLFTDTYLSSPLRTHAEPLGG
VVEGLSAGMFLIGMMVAVVSLLVYRQRLRKVAVQENPVVRMSMWKEVPASGLYMGVRSNR
RVTSPIKACHFESHLTKLQADSNYLLSEEFEDLKDVGRNQTMDVARLPENRGKNRYNNIL
PYDSTRVKLSYLEDDPCSDYVNASYIPGNNYRREYIATQGPLPGTKDDFWRMVWEHGVYN
VVMVTQCVEKGRVKCDQYWPADREPLYYGDLVIQMLSESVLPEWTIREFKISSESSRSYP
RVLRHFHYTVWPDHGVPESTQSLIQFVRTVRDYVDRSPSTGATVVHCSAGVGRTGTFIAL
DRVLQQLDSKGTIDLYGGVFDLRLHRQHMVQTECQYAFLHQCVRDVLRARKHRSEQENPL
YPIYENFNPEYCRDFIYTGR
NT seq
6003 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaatgtaaagttcaaagttctctctgctgcctgtgcttcacctcgctgctgctg
ctgctgctggatctgagcgctgcagctccatcacagggtcgctccctcacatgtaacatc
tccgtgtccgacccggtgtccggtctggactccatatcgctgacggtttttacacccgga
cgggactgcttgttcacactgacctctgcggacgccggaggagacagcggtgagtgtaga
agaagaggaggaggaggagacgaggagatagagactaatgagatcggaggaagagggcga
ggagaagacgtggaggtggaagtggagacggtggagactgcagcgaattatctgggaacc
aaccagctaggagtcgaggacgaagggatcaaggaggcaggagaggttttcacctgcgtg
ctggagcacctggagcctggaaccgcctaccagctgcaggtccaatcacggagcggcgag
gaggcgacgaacatcaccctgcacaccaagccgtcggcggtgagcggcctgacggtgacc
tccaggacctgcagcagcctgggcctttcctggcaggccggcccaggcaggacggagcgt
ttcaggctgcagctgtggaatcatgcagatctgctgaggaacgagacgttagagagcacg
gcgacgcaacacacagtcctcggcctgtcgccagggcgactgtacaacgttaccatggtg
acggaggccggcgggctgcagaacatggagacgatggaggctcagacagttcccgctgcc
gcctccaacttcaccgccaaccaccgcaacagcaccgccgtgttgttgtcgtggcaacgg
cccaaaggtgacctggacgcgctcgctgttgccgtctcgacctccaacggcacgagcctc
tgggagacgacacttcctccggacgccacggagctcgtcgttgatcagcttactcccggc
tcggcctatcgggtggcggtgacgtccaagagcggcaagctgacgaaccaatcagaaatc
agcatcaggacagctccggcagcgccgaccctcctctccctgacgcccgcctcctccggc
ggccttctcctgtcctggacgccccccgctggtctctgggacaactacacgctgctcctg
ttggacggctcgcagcaggtagtcagcgccgctctggaccgagaggcagcaaactacagc
ttcgccgggacggagctgacgcctgggaggctgttcagagccgtgctgagggtggagagc
ggaggactgacggctgagagcagctgtgacggagcgacagctccggccgccgtgttggac
ctccacatacgacactccgacgagacctcgctcagcgccatgtggagcgacgcccctggg
tcacgtgacagctacttcctgaccattcgccacggtaaccacacggaggctaccagggag
gtggagccaaacatgagggagtgcacctttaacgtgctcacacctgggaggcggtacacc
atcaccgtgacgaccaggagcaggaatctgaacacctctgtgtctctggaggggaggaca
gctccccggctgctggacgtcatcagtctgacaaactctggactcggcagcctccgagca
tcgtggtcaaaacctttcggagacgtggactcgtacacgctgaccctgctgcaagacagc
gtcgtggttcagaactacagcgttccagttcagtcttcttctctgctgctgaccggtttg
actcccggcgccctctacaggctgcaggccgtcaccgtcagcggggggctgcagtctaaa
cccacgagtctaaagggacgcaccgctccggcggcggtcaccgaggtaaccgttgccaac
agcggcaggtcggacgctcttcgggtgtcgtggcacccggcggtgggcgtggtggacagt
taccaggtccgcctccaggacaagagccaaaccgtccacacgctcaccgtgtcccgctcc
tcgccaccagagtgctccttcagctcgctggtcgccgggcgactgtactccgtcgtcata
gtgacgaggagcgacagcctggagaacgccacaacgattcaagcacgaacacaacctgcg
acggtggaaaacccgtcagctgttcactcagcgagagacgacttcctgaaggtgtcctgg
cgtcacgcagatggagatctggaccgctacgtggttctgatccgctacaaccacagagtt
ctgcagaacaagagcatctccggcggacacaacgagtgctccttcacgcatctgacgccg
gggagactctacaccgtcaccgtggaaacctggagcggagactacgtcagcagcgtgtcc
ttcgaaggacgcacctttccaggcgctgtcgggaatctgtcgctaggcaatgcagggaca
ggtgaactgaacgtcacctggagccccgccccaggagatgtggaacactatgaggtcact
ctgctcttcaatgacactcgggttttccctccggtctctttgaccaacgaggtgcgacat
caccgcctgacctctctgacccctgggcggctttataagatcgtggtgtcgacgttcagc
ggaccaaaccagagagcggagcgcatcgaaggacggacagttcccagtgcggtcgggaac
cttcgcctggatcctcggccgggcctgacagactctgtcggtgggctgttggcctcctgg
acacctggagacggagacctggacatgtatgtggcctccctgtccaccatggatggtgct
gccctcgatactcgtcctgtccctaaacatgtcacctccctggaattcctggatctggtc
ccaggtaacacctacaccataaccgtccaatcactgagcgggaagctgatcaataaaaac
acagccaccggccggaccgctccggccagagtcacggcgctgcaggccgataacgaccac
accactcacagcctcacggtcagctgggagaggccggtgggcgtgtacgacggctacagg
ctgcagttattggacgaggccggcgtccttcaggccaatcggtcggtttccgcggagagt
cgaagcgagcgtctggagggtctgacatccgggaagtggtaccgcgtgagggtggtgacg
ctcagcggcggcgtcctgtcgccggaggccacagcggagggacaaacacgtccggctgca
gtcagtaatctcaccgtcgcttcggtcaacacctcctctgtctccttctcgtggcgcccg
tcggacggccacgtggacaactacgagctgtcgctttacagcgtcgccgaggaaacggcc
aatcagagaagccggaaggagcatcatcatcatcagacgggcgagctggtggacctgcag
aaggtcggtccagctgcagacaggtgtgtgttctccggcctgcgagcaggaagtctgtac
agactgcaggtggtgagctggagcagaggcatgaacagcgactcgtctgtgctcgtcaga
accgtcccgccttcagtgtcgtctcttcaggttcagagttcaggacggacggacagactg
acggtcagctggacgcacggtgaaggaagctggagcagctatgaggtggtattgtacgat
ctttctggacccactctgggagcccagactctcggagctcagcacacgagtcacatgttc
tccgggctgatccctggtaggctgtatcgctctgaggtcatcacgcacagcggagagctg
accaataacatctcggcatacggacgcaccactccagagccgcccacccacctgtccgtc
aaacaaggcccgaccaatgacacgatagagctggcgtggtccggtcccgcctccggggac
tacgacacgttcagcctgcagtggacgcctccggaccagctgtccgtcacacagactgac
ctgagcagccgggtccttggtgggatgtttccagggcgactgtacaacttcaccgtggcg
accatcagcgggggcggagccaaggtcgggcccaccgtcacgagccagccaatccagagg
agtgtcaggacaagtccgtctcctctgaagtccattcactgcttcccactctcgtcctcc
tccctctcctgctcctggtcgcctccttcttccgacttcgactcctatgaggtcgagtgt
cgtcgccacgacaacggggagcttacctcggccctgcggctggctgagggcgtcaccgcg
gtaacgctggatcacttggaggcgtacaggaagtactcagtgacggtcagagtgtcgtca
gccggacagacgagtccaccggcgacacacacgaccgtcaccatgatagaccgtcctccg
gtcccgccgcccagcgtccgggtcagtgagaggtcgtccaagctcacgtcgtcctccatc
ttgttccgcttcaactgctcgtggttcagcgacgccaacggagccgtgaaatatttcacc
gtgatcgtggccgagtccgacgccaatgagatgctgcagccggaccagcgccaccctctg
ccctcctaccgcgactacatcaacaactcgtccgtcagagcgtatcagaccgcctacttc
tccagccgctgcctgcaggacggcgacgcccctgctggacaggtggtggaggtgaacctc
ggggccggaggagaccggctgggtggagcctgtgaccgttaccatgacgacgacctctac
ctgagcgacagctacggcggcttctgtgacgggccgctgaaagccaaaagctcctacagg
ctgagtgtgcgagcgttcaccagactgttcgatgaaaaccacagagaggtttctcagccg
ctcttcacggacacgtacctgtcctcaccgctcaggacgcacgcagagcctctgggcggc
gtcgtcgagggtttgagtgccggcatgttcctgatcggtatgatggtggccgtcgtctct
ctgctggtctacagacagagactccgcaaagtagccgtccaggagaacccggtggtgagg
atgagcatgtggaaagaagttccagcttcaggattatatatgggcgtccggagcaatcgc
agagtcaccagtcccatcaaagcttgtcactttgagtctcatctcaccaaacttcaggcc
gactcgaactacctgctgtccgaggagtttgaggatctgaaggacgtgggccgcaaccag
acgatggacgtcgcccgactgccggagaaccgaggaaagaaccgctacaacaacatcctg
ccatatgattccaccagagtgaagctgtcgtacctggaggacgacccctgctcggactac
gtcaacgccagctacatccctggtaataactaccgcagggagtacatcgccacccagggc
ccgctgcccggcaccaaggacgatttctggcgtatggtgtgggagcatggtgtctacaac
gtcgtcatggtgacacagtgcgtggagaaggggcgggtgaagtgtgatcagtactggcct
gcagacagagagccgctgtattacggcgacctcgtcatccagatgctgtccgagtccgtc
ctcccggagtggaccatcagagagttcaagatcagctcggagagcagccgcagttacccc
cgcgtgctgcgtcacttccactacaccgtgtggcccgaccacggcgtcccagagagcacc
cagtccctgatccagttcgtcaggacggtccgggactacgtggaccgatcgcccagcacc
ggagccaccgtcgtacactgcagtgctggtgtcggtcgtacagggacgttcatcgccttg
gatcgggttctgcagcagctggactctaaaggaaccatcgacctgtacggcggcgtgttc
gacctccgcctgcaccgccagcacatggtccagactgagtgtcagtacgccttcctgcat
cagtgtgtgcgcgacgtcctgagggccaggaagcaccgcagcgagcaggagaacccgctc
tacccgatctacgagaacttcaacccagagtactgccgcgatttcatctacaccggacgc
taa
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