Larimichthys crocea (large yellow croaker): 104933195
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Entry
104933195 CDS
T04659
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-3 isoform X1
KO
K04860
voltage-dependent calcium channel alpha-2/delta-3
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04010
MAPK signaling pathway
lco04260
Cardiac muscle contraction
lco04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
104933195
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
104933195
04261 Adrenergic signaling in cardiomyocytes
104933195
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lco04040
]
104933195
Ion channels [BR:
lco04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
104933195
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VWA_N
VGCC_alpha2
VWA
dCache_1
VWA_3
VWA_2
MCP-like_PDC_1
dCache_2
Flagellin_N
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
104933195
NCBI-ProteinID:
XP_027144636
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Position
XV:complement(14566322..14674489)
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AA seq
1092 aa
AA seq
DB search
MQVDRCCVVSSAWCACLLLLFSSLSTRVTGVGGTHQSIPPSVVKLWASAFGGEMKSISAK
YSGSQLLQKKYKEFERAVRVEEIDGLRLVKRLAEDMEEMFHKKAEAMKRLVEAAEEAHLQ
HEEDPNLQYEYFNAVLINEVDEVGNSVELGGEFILQPNDHFNNLSVNLSLSVVQVPTNMY
NKDSAIVNGVYWSEALNKVFVDNFERDPSLIWQYFGSAKGFFRQYPGIKWKPDEHGVIAF
DCRNRKWYIQAATSPKDVVILVDVSGSMKGLRLTIARQTVSSILDTLGDDDFFNIIAYNE
ELHYVEPCLNGTLVQADVTNKDHFREHLDKLFAQGIGMLDIALTEAFNLLSDFNETGRGS
ECSQAIMLVTDGAVDTYDAIFAKYNWPERKVRIFPYLIGRESAFADNLKWMACANKGYFT
QISTLADVQENVMEYLHVLSRPKVIDQEHDTVWTEAYIDNTLPQAQKLDDGQGPVLMTTV
AMPVFSTKNETRNRGILLGVVGTDVPVSELLKTIPEYKLGIHGYAFAITNNGYILTHPDL
RPLYGDGKKRRKPNYSSVDLSEVEWEDKDDTLRNAMVNRKTGTFSMEVKKSVDKGKRVLV
LHNDYYYTDIKGTPFSLGVALSRGHGKFFFRGNVTVEEGLHDLEHPDVALADEWTYCNTD
EHPEHRYLSQIEAIKLYLSGHEPHLQCDKELIQEVLFDAVVTAPLEAYWTSLVLNKSENS
DKGVEIAYLGTRTGLSRINLFVVPDELTNQDFLTAEDKEGVFNADHFPLWYKRAAEQVPG
TFVYSLPFNTGSENKSVVLASTAIQLLDERKSPIAAAVGIQMKLDFFQKKFWTASRQCAA
LDGKCSISCDDENINCYLIDNNGFVLVAEDYTLTGKFFGEAEGAVMSKLLQMGSFKRVTL
YDYQALCWVYSESSDSGHTLLDPYFAFFSALKWILTELVIFLVEFNLYSWWHSDLTAKAQ
RMGRTMQVPCDTEYPAFISERTIKENTGNVDCDGCIKSFVIQQIPSSNLFMVVVDNKCDC
SMFEPITMDPIEIMYNESLKCERLKMQKDRRRPDTCHPFHPEENSMECGGAVGLTPSLAA
TLLCVLLALLPR
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtggatcggtgctgtgtggtctccagtgcgtggtgtgcgtgtctgcttttactt
ttctcaagtctaagcaccagggtcactggggtgggaggaacccaccaaagcatccctccg
tccgtggtgaagctttgggcttcagcatttggcggggagatgaagtctatctctgcaaag
tactctggctcccagctgctgcagaagaaatacaaggagtttgagcgggcagttcgggtg
gaggagatcgatgggctgcggctggtaaagaggttggcagaagacatggaggagatgttt
cacaagaaggccgaggcaatgaagagactggtagaggcggcagaggaagcccatctacag
cacgaggaggatccaaacctacagtatgaatacttcaatgcagtgttgatcaatgaggtg
gacgaggtgggtaacagcgtagagttgggaggagaattcatcctgcaacccaatgatcac
ttcaacaacctgtcagtcaacctcagtctcagtgtggtccaggtgcccaccaacatgtac
aacaaagactctgcgattgtcaacggagtgtactggtccgaggccttgaataaagtgttt
gtggataactttgagagagacccatcactcatatggcaatactttggcagtgccaaaggc
tttttcaggcagtacccagggatcaagtggaaaccagatgaacacggagtcatagctttt
gactgtcgtaaccggaaatggtacatccaggctgccacctctccgaaggacgtggtcatc
ctggtggatgtcagtggcagtatgaaaggcctcaggctgaccatcgccaggcagactgtc
tcctccatattggacactcttggagatgatgacttttttaacatcattgcttacaatgag
gaattacattatgtggagccgtgcctaaatggaactctggtccaagcagatgtcaccaac
aaagatcatttccgggagcacctcgacaagctgtttgctcaaggcattggtatgttagac
atagctctgactgaggccttcaatcttctcagtgatttcaacgagactgggagggggagt
gagtgtagccaggccattatgttggtgacagatggggcagtggacacatatgatgccatc
tttgccaagtacaactggccagagaggaaggtccgcatattcccttacctgattggtcga
gagtcagccttcgcagataatctgaaatggatggcatgtgctaacaaaggctacttcact
cagatttccacattggcagatgtgcaagagaatgtgatggagtatctccatgtgctgagt
cgtcctaaggtgatcgaccaggagcatgacacggtgtggactgaggcctacatcgataac
actctcccccaagcacaaaagttggatgacggtcaaggtccggttctaatgaccacagtg
gcaatgccagtgttcagtaccaagaacgagaccagaaaccgtggtattctgctaggagtg
gttgggacagacgtgcctgtctctgagctgctcaagaccatcccagaatataagctgggc
attcatggctacgcctttgcaatcaccaacaatggctacatcctgacccatccagatcta
cggccactttatggagatggcaagaagcggaggaaacctaactacagcagtgtggatctg
tccgaggtggaatgggaggataaagatgacacgctgagaaatgccatggtcaacaggaag
acagggaccttctccatggaggtgaagaagagtgttgacaaagggaagcgtgtactggtg
ttgcataatgattactattacacagacatcaaggggactcctttcagcctaggggtagct
ctttccagaggccatgggaagtttttcttcaggggaaatgtcacagtggaggaaggactt
catgacttggagcatcctgatgtagcactggcagatgaatggacatactgcaacaccgac
gagcacccagagcaccgctacctgtcccagatagaagcaattaaactctacctcagtgga
cacgaaccccacctacaatgtgacaaggagctgattcaggaggtcctctttgacgctgtg
gtgactgcacctttggaagcttactggacaagtcttgtgctcaataagtctgagaactcg
gataaaggagtggagatagcctacctgggcacaagaacgggcctgtccagaattaacctg
tttgtggtgcctgacgagcttacaaaccaagacttcctgacagctgaagacaaagagggg
gtgttcaatgccgatcactttcccctgtggtacaagagagcagcagaacaagttcctggt
acctttgtctactcgttacctttcaacacaggatcagaaaacaagagtgttgtattggcc
agcactgccattcagcttctggatgagaggaaatcacccatagctgcggctgtgggcatc
cagatgaaactggacttctttcagaagaaattttggacagccagcagacagtgtgcagca
ttagatggaaaatgctccataagctgtgatgatgagaatattaactgctacctcatcgac
aacaacggcttcgtcctggtagcagaggactacactctgacagggaagttttttggagaa
gcagagggagctgtaatgagtaagcttctacagatgggctctttcaagagggtcactctg
tatgactaccaggctctatgttgggtttattcagagagcagtgacagtggacacacactg
ttggatccttactttgctttcttctcagccctgaagtggatcctgactgagcttgtcata
ttcctggtcgagtttaatttgtacagctggtggcactctgacctcacagctaaagctcag
agaatgggtcggaccatgcaggtaccatgtgacacggagtatccggccttcatctcagag
agaaccatcaaagagaacaccggcaacgttgactgtgacggctgtatcaagtcctttgtg
atccagcagatccccagcagtaatctcttcatggtggtggtggacaacaagtgtgactgc
agcatgttcgagccaatcaccatggaccccatcgaaatcatgtataatgaatctctcaaa
tgtgagaggttgaagatgcaaaaggacaggaggcgcccagatacctgtcacccttttcac
cccgaggagaactcaatggagtgcggaggagctgtggggctcactccgtctctcgcagca
acactgctttgtgtcctcctggcgctgttgcctaggtga
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