Larimichthys crocea (large yellow croaker): 104933243
Help
Entry
104933243 CDS
T04659
Name
(RefSeq) receptor-type tyrosine-protein phosphatase zeta isoform X1
KO
K08114
receptor-type tyrosine-protein phosphatase zeta [EC:
3.1.3.48
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lco01009
]
104933243
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
lco00535
]
104933243
Enzymes [BR:
lco01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
104933243
Protein phosphatases and associated proteins [BR:
lco01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
104933243
Proteoglycans [BR:
lco00535
]
Cell surface proteoglycans
Others
104933243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
Carb_anhydrase
fn3
Tc-R-P
PTP-SAK
DSPc
Y_phosphatase3
PTPlike_phytase
GUN4_N
PTP-NADK
Pur_ac_phosph_N
Adeno_PIX
Motif
Other DBs
NCBI-GeneID:
104933243
NCBI-ProteinID:
XP_027130293
LinkDB
All DBs
Position
III:complement(25677970..25731912)
Genome browser
AA seq
1435 aa
AA seq
DB search
METAVHRTNIFTCQLLLFSQIVVAAEPLVRGLRKLPEDIDWSYSGTLNQRNWGKKYPSCN
SARQSPLDVDELFTQVRLQYQNLQLEGWDKLTAESSTIHNNGKTVSIVVEGDFFVSGGGL
SSRFRVGRIAFHWGRCNATSDGSEHSLNGMKYPLEMQIYCYDPDDFQSLDDAIREGGRIA
ALAVLFDISLEDNEDFSRVIDAVNTVSRFGKSGSMEAFTLRSLLPNNTDKYYIYNGSLTA
PPCSETVEWIIFKHTVAISETQLEVFCEVMTMEQAGYVMLTDYLQNNFREQQQQFMGQVY
ASYTGVEDVLTPTCSSEPENVQADAQNDTTIVVTWERPRAVYDTTIDWYTVTYQRLQGRD
PSKQEYRTDGDQDVGAIIPSLLSNSSYVVQVVAVCTNGLRGRWSDQIIVDMPLEDPVSDP
DPDAVTKDLEGYREVSSKARWEKPETQNQVDLSPEDHSPVEEIPVEQTRVYQNHPTHQQN
QPNPENQNRSTPKTPSESAVLQKTRLSQNVKKKQSRGKSKPDDMDQNWIDEDRMSLTNRP
FTNAGFDGNGAIWVTELTEQPGFLFPVARTTTQPTIRRQITEEASLSVLPHQSRDHGPPD
KGIESGLSSPQLDFYTPPVEDIQVTDVFYEDTVNNSPLETTSSAATVPAAAATAAAVLPG
QEVDEVSPAAPGDSDTPTNKPPPETTSDPSSPSSLWITERTVTASNTLAESVYKSYTTSS
LLRVLIHTTQPMFNEGSNSSHESRVGLVGGVEREKRTVIPLAVVSTLTILCLLVLVGILI
YWRNCFQAANFYPDDSASPKVISVPSTPMLLATDGHEPLTVKQFVKHIMELHANNTFSKE
FEIVKESYEEVQACTVDMGITADSSNHPDNKSKNRYINILAYDHSRVKLSNSLDRDGKCG
DYINANFVDGYERTRAYIAAQGPLRAGREDFWRMIWQQNVGVIVMITNLKEKGRTKCDQY
WPEENQEEYGPYQVTLKSSKTLAYYTLRTFTVRDTTNKASQRRVEHTVLHYHYTQWPDMG
VPEYTLPVLSFIRASSRARTHEMGPVLVHCSAGVGRTGTYIVIDSMLQQIQDQGTVNVLG
FLKHVRTQRNFLVQTEEQYVFIHDTLVEAILSRDTSVTSDLLHTYVSDLLTPGASGRTRM
DKQFKLISQRQAKHADYSTALRDGNAERNRARALMPVERSRVCLTASETNSTGYINASYV
MGRHHSKEFIVSQTPLSSTVADFWRMIWEHNTHTVVRLPDTHCQSEEGQSCVYWPSKDQP
MSFEGFTVSYSGEEHICLSNDERLLVQDFTVESPQNTYLLEVRQYSATCWPNPDSPIRNS
FDLVNTVREHSRHSDGPTVIHDPLGGATSGLFCALTTLSSQLEEEGAVDVYQVARMTNLM
RPGVFNDVEQYQYLYRAVLSLVSSQEDQRALQSPETNGSVPLGQTNIAESLESLM
NT seq
4308 nt
NT seq
+upstream
nt +downstream
nt
atggagacggcagttcacaggaccaatatcttcacgtgccagcttctcctgttcagccaa
atagttgtggcagcagagccgctggtccgaggcctgaggaaactcccagaagatatcgac
tggtcgtactcaggtaccctgaaccagcgcaactggggtaaaaaatacccgtcctgtaac
agcgccaggcaatctcctctggatgtcgacgagttatttacccaagtcagactgcagtac
cagaatctgcagctcgaaggctgggacaaactgacagcagagtccagcactatccacaac
aatgggaagactgtgtccatcgttgtggaaggggacttctttgtgagtggaggagggctg
agctccaggttccgtgttggtagaatcgcgttccactgggggcgctgcaacgcgacgtca
gatgggtctgaacacagcctgaatgggatgaaataccctctggagatgcagatctactgt
tacgatccagatgatttccaaagtctggacgatgctatccgggaaggagggaggatcgcc
gccttggctgtgctctttgacatcagcctggaagacaacgaggacttcagtcgtgttata
gatgctgtcaacactgtcagcaggtttggtaagagcgggtcgatggaagccttcaccttg
cggtccttgctgcctaataacacagataaatattacatctacaacggctcactgaccgca
cctccctgttccgagacggtggaatggatcatctttaaacacaccgtagccatatcagaa
acacagttggaggtgttctgtgaggtgatgacgatggagcaggcgggatacgtgatgctg
acggattacctgcagaacaacttcagggagcagcagcagcagttcatgggacaggtgtat
gcctcatacaccggagtggaagacgtgctcacacccacctgcagctcggagccagagaac
gtccaggctgacgcccagaacgacacgaccatcgtggtgacgtgggagcgtccccgcgcg
gtttacgacacaaccatcgactggtacaccgtcacctaccagaggctgcagggccgagac
ccgagcaagcaggagtacaggacagacggggaccaggatgtgggcgccatcatccccagc
ctgctgtccaacagcagctacgtggttcaggtggtggctgtttgcaccaacggactcaga
ggacgatggagcgaccagattattgtggacatgccgttagaggaccccgtaagtgatcca
gatcctgacgctgtcacaaaagacttggaaggctacagggaggtctcatctaaagccaga
tgggagaaaccagagactcaaaatcaggtggatttgtctccagaggaccacagccccgta
gaggagatcccagtggagcagaccagagtttaccaaaaccatccaacacaccagcagaac
cagcccaacccagaaaatcagaaccggtcaaccccaaaaactccctccgagtctgccgtt
ttacagaaaactcgactcagccagaacgtgaagaagaaacagagccgaggaaagtccaaa
cccgatgatatggatcagaactggatcgatgaggaccggatgagcctgacaaacaggccg
ttcaccaacgcaggttttgacggcaatggtgcaatatgggtgactgagctaactgagcag
ccgggcttcctgttcccagtggctcgtacaaccacccagccgacaatccgccgacaaatc
acagaggaggcctcgttgtcagtgttgccacatcagtcgagagatcacggtccaccagac
aaaggcattgagagcggcctctcgtctccccagttggacttctacacccctcctgtggag
gacatccaagtcacagatgttttctatgaagacacagtcaacaactctccactcgaaacc
accagctctgcggcaacagtgcctgctgctgctgccactgctgctgctgtgttgccaggt
caagaagtggacgaagtctcaccggcggcccctggagacagcgatacccccacaaataaa
cctccaccagaaaccacatcagatccctccagcccctcctccctctggatcacagagagg
acggtgaccgccagcaacacactcgctgagtcagtctacaaatcatacaccacctcctct
ctgctcagggtgctgattcacacaacccagcccatgtttaatgagggcagcaacagcagc
cacgagtctcgggtgggtctggtcggaggcgttgagagagagaagaggacagtcattcct
ctggctgtcgtctccactctcaccatcctctgtctgctggtactggtgggcatactcatc
tactggagaaactgtttccaggcggctaatttctacccagatgacagcgcctcacctaaa
gtcatatctgttccatctacacccatgctgctggctacagacggtcacgagccgctgaca
gtgaagcagtttgtgaagcacatcatggagctgcacgccaacaacaccttctccaaggag
tttgagattgtcaaagaatcctatgaggaggtgcaggcgtgcacagtggacatgggcatc
actgccgacagctccaatcaccccgacaacaaaagcaagaaccgatacatcaacatcctg
gcctacgaccacagcagagtgaaactctccaacagtttggaccgagatgggaaatgtggg
gactacatcaacgctaactttgtggacggttatgagcgaacaagggcgtacatcgcagct
caagggcctctgagagcgggcagggaagacttctggaggatgatctggcagcagaacgtt
ggagttattgtcatgatcaccaacctcaaggagaaaggacggacaaaatgtgaccagtac
tggccagaggagaaccaggaggaatatggcccgtaccaggtgaccctgaaaagcagcaag
accctcgcttactacacactgcggacattcactgtcagagataccacaaataaggcttct
cagaggagagttgaacacacagtccttcattaccactacacccagtggccagacatgggc
gtcccagaatacactctccctgtcctctccttcatcagagcgtcatctcgtgcacggaca
catgagatgggacccgtgctggtacactgcagtgccggtgtaggaaggacggggacctac
atagtgatagacagcatgctgcagcagatccaggatcagggcacagtgaatgttcttggt
ttcctaaaacatgtacgcacgcagaggaacttcctggtacagacggaggagcagtacgtg
ttcatccatgatactctggtggaggccatcttgagccgtgacacctctgtgacctctgac
ctcctccacacttatgtgtccgacctcttgacccccggggcgtcaggcaggacgcgcatg
gacaaacagttcaagttgatcagtcagcgtcaggcgaagcacgcggactacagcactgcc
ctgagagatggcaacgctgagaggaacagagcaagagctctgatgcctgtggaaagatca
agagtgtgtctaaccgcttcggaaacaaactccacaggatacatcaacgcctcatacgtc
atgggacgtcaccacagtaaagagttcatcgtgagccagactcctctgagcagcacggtg
gcagatttctggagaatgatctgggagcacaacacacacactgttgtccgtctgccagac
acacactgtcagagtgaagaggggcagtcatgtgtttactggcccagtaaagaccagcca
atgagctttgagggtttcactgtgtcgtactcgggggaggagcatatatgtctgtccaat
gacgagagacttttggtgcaggactttacagtggagtctccacagaacacttatctgttg
gaggttcgtcagtacagcgccacctgctggcccaacccagacagtccaatcaggaacagc
tttgatctggtcaacacagtcagagagcacagcagacattcagacgggcccacagtcata
catgacccgttgggaggtgctacatcaggcctgttctgtgccctcaccaccctgtccagt
cagctggaggaggagggagcagtcgatgtctaccaggtggcacggatgaccaacctcatg
aggcctggggtttttaatgatgtagagcagtaccaatatctgtaccgggctgtgctgagt
ctggtgagcagccaggaagaccagagagccctgcagagtccagaaaccaacggatctgta
ccactgggacagactaacatcgcagagagcctggaatccctcatgtag
DBGET
integrated database retrieval system
