Larimichthys crocea (large yellow croaker): 104933436
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Entry
104933436 CDS
T04659
Symbol
calcoco2
Name
(RefSeq) calcium-binding and coiled-coil domain-containing protein 2
KO
K21348
calcium-binding and coiled-coil domain-containing protein 2
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04137
Mitophagy - animal
lco04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
104933436 (calcoco2)
04137 Mitophagy - animal
104933436 (calcoco2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lco04131
]
104933436 (calcoco2)
03029 Mitochondrial biogenesis [BR:
lco03029
]
104933436 (calcoco2)
Membrane trafficking [BR:
lco04131
]
Autophagy
Xenophagy
Cargo receptors
104933436 (calcoco2)
Mitochondrial biogenesis [BR:
lco03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
104933436 (calcoco2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SKICH
Tropomyosin
GAS
ATG16
Tup_N
Trm112p
Motif
Other DBs
NCBI-GeneID:
104933436
NCBI-ProteinID:
XP_010747186
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All DBs
Position
XVI:23215558..23222398
Genome browser
AA seq
623 aa
AA seq
DB search
MESSTEAAPTGSSASTFSQVVFMGIPHSYPPSTHVTCCYTLNAAFQPNPRDWVGIFKVGW
STTKDYHTFVWVEPCLDVVGEQTARQAVFKDYYLPKDEIEFYQFCYIDSTGQVRGASTPF
CFRNPTEQSMESSPDDDLLVITTQEQVEQSVREKAELQKELNQFMEENETLKKALENQQQ
EAASLKGQNEQKEKENCQLLRELDQFKQQNEKLQHNLQQQLIETDRIKVCCQATCENLNP
VLQYEEMLVQMTKQMEIQQQSAAEQIKTSQSLSSEATFRQNEAHLQEKYDRAVTKINQLK
GERDELRGVVEAQSDEIASLSSKIREAEREVFKMKDSVQLLEVDLQSSEKEKEGLAAELQ
RLQSLTHNMDSMKRENQELCRRLSQQETLQNSDPSDDMRVQCQSLDCQLQEARLKLAAEK
EESKNAKRRVEFLEMELTRVREQVDSAVISSAEIQRKCNKQELQLREAHEMILDSKVAID
DKEQMMTLLNQEKDELMRENQALKHEMEELRRAYTDLHAAPPADTSYMQPETASPPAGTS
PSTHEWPQPETPDQAEQLYETIGQEEMQEQTLVCRHCQESFPFITRQELEQHEQSHRVCP
FCTMICDNMEQSVFEDHVYSHEL
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggagagctccacagaggcagcacccaccggctcctcagcatccaccttctcccaggtg
gtgttcatgggcatcccccactcatacccaccttcaacccacgtcacctgctgctacacc
ctcaacgctgccttccagcctaatcccagggactgggtgggcatctttaaggtcggctgg
agcacaacaaaggattaccacacctttgtatgggtggagccgtgcctggatgtggtagga
gagcagacagcgaggcaggctgttttcaaggattactacctgcctaaggacgagatcgag
ttctaccagttctgctacattgacagtaccggccaagtgagaggagccagcactcctttc
tgtttcagaaacccgacggagcagagcatggagagcagcccggacgatgacctcctggtt
attacgacacaggagcaagtggagcagagcgtgcgggagaaggctgagctgcagaaagag
ctgaatcagttcatggaggaaaacgaaaccttaaaaaaagctctggagaaccagcagcaa
gaagccgccagcttgaaggggcagaatgaacagaaagagaaagaaaactgtcagctgctc
agagaattggatcaattcaagcagcaaaatgagaagttacaacacaacttacagcaacag
ctgatagaaacagaccgaataaaggtttgttgtcaggccacatgtgaaaatctaaaccca
gtgctgcagtatgaggagatgttggtccaaatgacaaagcagatggagatccagcaacag
agcgctgctgagcagataaaaacgagccagagcttgagttcagaggcgacattcagacaa
aatgaggcacaccttcaggagaaatacgaccgagccgtgacgaagatcaaccagctcaaa
ggggagcgcgacgagctgaggggggtggtcgaagctcagagcgacgagatcgcctccctc
agttccaaaatcagagaagcagaacgggaagtgttcaaaatgaaagacagcgtccagctt
ctggaggtcgaccttcagagcagtgagaaagagaaggaggggctcgctgcagagctgcag
aggttgcaaagcctcacgcacaacatggacagcatgaagagagaaaaccaggagctatgc
aggaggctgtcgcagcaggagacgctgcagaactcagatcccagcgacgatatgagggtg
cagtgtcagtctctggactgccagcttcaggaggctcggctgaagttggcggctgagaag
gaagagtccaaaaacgccaagagacgagtcgagtttctggagatggagctgactcgtgtc
agggagcaggtggactctgctgtcatttcaagtgcggagatccaacggaaatgtaacaaa
caagagctccagctcagagaggcacatgaaatgatcctggatagtaaggtcgcgatcgac
gacaaggaacaaatgatgacgcttttgaatcaagagaaagacgagctgatgagagagaac
caggctctcaaacacgagatggaagagctgcgcagagcttataccgacctccacgcagct
ccaccagctgacacgtcatacatgcagcctgaaaccgcctcaccgccggctggcacctct
ccgtccacccatgaatggccacagccggagacacctgatcaggccgaacagctgtatgag
actatagggcaagaggaaatgcaagagcaaacgctggtgtgccgtcactgccaggagagc
ttccctttcataactcgacaggagctggagcagcacgagcagagccacagagtgtgtcct
ttctgcacgatgatctgcgacaacatggagcagtctgtgttcgaagatcacgtctacagc
cacgagctgtga
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