Larimichthys crocea (large yellow croaker): 104933454
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Entry
104933454 CDS
T04659
Symbol
ccdc174
Name
(RefSeq) coiled-coil domain-containing protein 174
KO
K25178
coiled-coil domain-containing protein 174
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lco03019
]
104933454 (ccdc174)
03041 Spliceosome [BR:
lco03041
]
104933454 (ccdc174)
Messenger RNA biogenesis [BR:
lco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
104933454 (ccdc174)
Spliceosome [BR:
lco03041
]
Complex C
Other components
EJC/TREX
104933454 (ccdc174)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4078
Motif
Other DBs
NCBI-GeneID:
104933454
NCBI-ProteinID:
XP_027135681
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All DBs
Position
VI:8797551..8804760
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AA seq
580 aa
AA seq
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MDKKKKPFAVTASSLVDLKAELYRKQEQFKHDKLRQVHAGASRSRDTKKPTVWSKQNAGV
SARAEKDAEQLSEEQNSLDASKRRLEEKAKLYEQMTKGDFPDEETEGLFLVDFTQKIIDK
KRETLAQKERDEEEERDDPSPIPPPQNRDEEWVDYVDALGRSRRCMKKDLPGFQKMDQDL
KGKGSVPADLLSEDMRRELQRQEWEREEEEAMKRPVGPIHYEDIRGQEARELGVGYFAFA
QDGESRRKQRETLDMLRDQTTEQRTKREKLKEKRQAILHARLAKVRQRKLKKAKLDGTED
EENEGEEGEDELIGPTPPPEEFPEISTVKKVEVEIQERKDTKPGVPHVREWDRGKEFMFS
EWKSRRREERDTEFAPPTAYFSEEKRQTFGKNKTQENKSKMSFKWTKGPEKEENKEEPQP
QPETSPSHPPPPPPPPQQDPPPAPQPQSSSQSTPPDHPTDSAPVSVPPFNPPQYAPPQFY
PPFYPPPHFAGPPHLFPPQYPPQYPPQYLPQQPPQYPPQQPPQYPPQQPPQYPPQQPPQY
PPQQPPQYPPQQPLQPAEPGQAQQPAQSLDDMLSFYRNFS
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaagaaaaaacctttcgccgtgacggcttcatcgctggtggacctgaaagct
gaactctacaggaagcaggagcagttcaaacatgacaaactgaggcaggttcacgctgga
gcatcaagatccagagacaccaagaaacctacggtgtggagcaaacaaaatgctggtgtg
tcagcgagagctgagaaagacgcagagcagctgtccgaggagcagaacagcctcgacgct
tcaaaacgcaggctggaggaaaaggccaaactttacgagcagatgacaaaaggagacttt
ccagatgaagagaccgagggactgttcctggtcgacttcacccagaagattatcgacaaa
aagagagaaacacttgcacagaaggaaagagatgaggaggaggagagagacgacccgtct
cctatccctcctccgcaaaaccgggatgaggaatgggtggattacgtggatgctttaggc
cgatctcgtcgatgcatgaagaaagacctgccaggttttcagaaaatggaccaagacctg
aaaggaaaagggagcgtcccggctgacctcctgtcagaggacatgcgtcgagagctgcag
aggcaggagtgggagagggaagaagaggaggctatgaagaggcctgtcggaccgatccac
tacgaggacatcagaggacaagaggctcgggagctcggtgtgggttactttgcgttcgct
caggatggagagtcccgcaggaagcagagagaaactctggacatgcttagagaccagaca
acagagcagcgcacgaagagggaaaaactgaaggagaagagacaagccatcctgcatgcc
agactggccaaggtgaggcagaggaagctgaagaaggccaagctggacggcactgaagat
gaggagaatgaaggagaggagggggaagatgagttaataggaccaacgcctccaccggag
gaattcccagagatcagcacggtgaagaaggtggaggttgagatccaggaaaggaaggac
accaaaccgggagttcctcatgtcagagaatgggacagagggaaagaatttatgttcagc
gaatggaaaagtcgtcggcgtgaagagcgagatacagagtttgcgcctcccactgcgtac
ttcagcgaggagaagagacaaacgtttgggaagaataaaactcaggagaataaatccaag
atgtcctttaagtggacgaaaggcccggagaaggaggagaacaaggaggaaccacaacct
caacctgaaacctctccctcacatcctcctcctcctccccctcctcctcagcaagatcct
ccacctgctccacaaccgcagtcttcatcgcagtcaacacctccagatcacccgacagac
tcagctcctgtttctgttcccccctttaatcctccccagtatgcccctcctcaattctat
cctccattttatcctcctcctcacttcgctggaccacctcacctgtttcctccacagtat
ccgccccagtacccgccacagtatctgcctcagcagcccccacagtacccgcctcagcag
cccccacagtacccgcctcagcagcccccacagtacccgcctcagcagcccccacagtat
ccgcctcagcagcctccacagtacccgcctcagcagcccctgcagcctgcggagcctggc
caggcccagcagcccgcacagagtttagacgacatgctgtccttctacaggaacttttcc
tga
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