Larimichthys crocea (large yellow croaker): 104933493
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Entry
104933493 CDS
T04659
Symbol
scrib
Name
(RefSeq) protein scribble homolog isoform X1
KO
K16175
protein scribble
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
104933493 (scrib)
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
LRR_14
LRR_8
PDZ_2
LRR_4
LRR_1
LRR_LRWD1
LRR_13
LRR_9
Motif
Other DBs
NCBI-GeneID:
104933493
NCBI-ProteinID:
XP_027130097
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All DBs
Position
XXIII:complement(6736586..6794895)
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AA seq
1821 aa
AA seq
DB search
MLKCIPLWRCNRHVESVDKRHCNLQTVPDEVFRYSRSLEELLLDANQLKDLPKPFFRLLN
LRKLGLSDNEIQRLPPEVANFMQLVELDISKNDIPEIPESIKFCRALEIADFSGNPLSRL
PDGFTQLRALAHLALNDVSLQTLPNDIGNLANLVVLELRENLLKSLPTSLSFLVKLEQLD
LGANELEVLPDTLGALPNLRELWLDRNQLSSLPPELGNLRRLVCLDVSENRLEELPSELN
GLLALTDLLLTQNLLEVVPDSIGSLKQLSIFKVDQNRLTHLTDSIGECENLTELVLTENL
LQSLPRSLGKLKKLTNLNVDRNRLGSVPKELGGCASLNVLSLRDNRLGKLPAELADATEL
HVLDVAGNRLQNLPFALTNLNLKAMWLAENQSQPMLKFQTEDDERTGEKVLTCYLLPQQP
SPSLENLLQNSVDDSWTDSNLNRVSVIQFQEETKAEDEDDEAAAERRGLQRRATPHPSEL
KVMKKVIEERRNEAYTSRSDGEEESLDQQEKRLSDLSNQSHDSQVSNSTLSATSHEDRHN
VTSASQREDLVDGHYPQEEEELDEMEVEYIEPTVHFAEEPIIRGGDEDDDEDREDGERSE
EEDERPTFPTEKQRLIRKDTPHYKKHFKITKLPKPEAVAALLQGFNPDSLNSPTQAAEDE
QDEEEEENLCTPQHHRRLEELEDSRHQGNSSQVKGVSFDQVNNLLIEPARIEEEEHTLTI
QRQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAGVKVGDKLLEVNGVDLHEA
EHHTAVEALRSSGAAVSMTVLRERMVEPENAITTTPLRPEDDYFPRERRSSGLAFNLETT
PSGPQQRLSTCLIRNDKGLGFSIAGGKGSTPYRTGDTGIYISRIAEGGAAHRDSTLRVGD
RVISINGVDMTEARHDQAVALLTGTSPTIALLVERDPNAPGGSPGQNRARAHSPPPPEPS
DSPDQEEDLSLHGNHLSQMEDEYPIEEVTLVKSGGPLGLSIVGGSDHASHPFGVNEPGVF
ISKVIPHGLACQSGLRVGDRILEVNAIDLRHATHQEAVRALLANKQEIRMLVRRDPSPPG
MQDIMIQKQPGEKLGISIRGGAKGHAGNPFDATDEGIFISKVSSSGAAARDGRLQVGMRI
LEVNNHSLLGMTHTEAVRVLRAVGDSLGMLVCDGFDPRKVAAVEASPGIIANPFAGGIVR
KNSMESISSIDRDLSPEEIDIMQKESEMVRETSQWEREEMEKVERMRLEREEATRLLEEE
TENIGTGPLKLDYKTLAALPTTSLQKVNRAPSSDYTRTDSPIREAPYSPTIQPPSHHSSD
SSPYAGRETRFANIHYTSTPTAKDDPSSSTRPGAIQPVGRVRQSPSPATPDGHSPNPFQH
GPSPFNSQTSDLYGVRNNFHPKQPSPEPEWNNEVFDDDIDGQEGAGKGLTNKLSPRREYM
SLAAVPRLSRLSTELQTPSPGGKDSPEQRSFRDRQKYFEIDVKQQTPDKPKPRVSLVGED
DLKKMREEEERKFEQRAREYLLDEDEEDEEEDLVKQMAQMKASGKVLLDGVEYKVEPVST
PSQHCSTPPSYNVTPPSYCGSSGPSSVDGKVDSQRNSLEDSFRLEQRPNSMTGLIPVYPG
ESAAPIRTAKAERRHQERLRMQSPELAVAPDKDLSPAEKRALEAEKRAMWRAARMKSLEQ
DALKAQMVIAKSRDGKKRGTLDQLTESPSPAPTPSPTPMEELSPRGLTSPGRLSLSSKKF
DYRQFAAIPSSKPVYDIQSPDTVDDMQFIDDGSSNPGPTACPEAEVPTALPATSALEEMA
LYSNKRKLRQGRRSLETAVPT
NT seq
5466 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagtgtatccccctgtggcgctgcaaccgccacgtcgagtcggtggacaagcgg
cattgcaacttgcagacagtccccgatgaggtgttccgctacagccgcagcctggaggag
cttctcctcgacgccaaccaactcaaagacctaccaaagcctttcttcagactactgaac
ctccggaagcttggcctgagtgacaatgagatccagagactccctcctgaggtggccaac
ttcatgcagctggtggaactggacatctccaaaaacgacattcctgagatccccgagagc
attaagttttgcagggctttggagatcgcagacttcagcggaaaccccctgtccagattg
ccagatggcttcactcaactccgagcgctggctcacttggcactcaacgacgtgtcattg
cagacgttgcccaacgacatcggaaacctggccaacctcgtggtgctggagctgagggag
aacctgctgaagtctctacccacgtcgctctctttcctggtgaaactggaacagctggac
ctgggcgccaatgaactggaagtcttgccggacacccttggtgctctccccaacctgagg
gagctctggctggaccgtaaccagttgtcctcattgccacctgagctggggaacctccgg
agacttgtgtgtctggatgtgtcagagaaccgtctggaggaacttccctcagagctaaac
ggcctcctggctctcactgacctgctgctcacacagaacctgctggaggtcgtccctgac
agcataggctccctgaaacagctgtccatctttaaggtggaccagaataggctgacccac
ctgactgattcaataggagagtgtgaaaacctcacggagctcgtcttgacagagaacctt
ttacagtcacttcctcgctcgctgggcaagctgaagaagctgaccaacctgaatgtagac
cgcaaccgtttgggcagcgtgcccaaagagctgggcggctgtgccagcctcaacgttctc
tcactgagagacaaccgcctgggcaaactgcccgctgagcttgcagatgccaccgagctg
catgtgctggatgtggctggaaacagattacagaacttgcctttcgccctgacaaacctc
aatctgaaggccatgtggctcgcagagaaccaatcacagccaatgctcaagttccagaca
gaggatgacgagcgaacgggagagaaggtgttgacctgctatctgctgccccagcagcct
tctccaagcctagaaaacttgctgcagaacagtgtggatgacagttggacagacagcaac
ctgaaccgagtgtcagtcattcaattccaggaggagaccaaagcagaggatgaggatgat
gaggctgctgcagagcgcagaggccttcagcgcagagccacaccgcaccctagtgagctt
aaggtgatgaagaaggtgatcgaggagaggaggaatgaagcttacacatccagatctgat
ggtgaagaagagtcccttgatcaacaggagaagcggctcagtgacctgtccaatcaaagc
catgactcccaggtgtccaacagcacactgtcggccacctcccacgaggacagacacaat
gtgacctcggcctcgcagagggaggaccttgtagatggtcactacccgcaggaggaggaa
gagctggatgagatggaggtggagtacattgagcccactgtacacttcgcagaggagccc
atcatccgcggtggggatgaggacgacgacgaggacagggaagacggcgagagaagcgaa
gaggaagacgagaggccgacttttcccaccgagaagcagcgtctgatcagaaaggacacg
ccacactacaagaagcacttcaagatcaccaagctgcccaagcccgaggctgtggccgcg
ctgctgcagggcttcaatcccgacagtctcaactccccgacacaggccgccgaggacgag
caggacgaggaggaagaagaaaatctatgcacccctcagcaccatcgcagactagaggaa
ctcgaggacagccggcaccagggaaactccagtcaagtaaagggggtgtcatttgatcaa
gtcaataatctgctgattgaacctgctcgaattgaggaggaagagcacaccctgaccatc
cagcgacaaacaggtggcctgggtatcagcattgctggagggaaaggatctacaccttac
aagggagatgatgagggaatcttcatctccagagtatctgaggagggtcctgcagccaga
gcaggggtcaaagtgggagacaaacttctagaggtgaatggagtggacctccacgaagca
gaacatcacacggcagtcgaagctctccgtagctccggcgctgcagtttccatgacggtg
ctgcgggagcgtatggtggaacccgagaacgccatcaccaccacgccgctgaggccagag
gacgactacttcccgcgggagagacggagcagcggcctcgccttcaacttggagacgact
cccagcgggcctcagcagcggctctccacctgcctgatccggaacgacaaggggctgggg
ttcagcatcgcgggggggaaaggctccacgccttaccgcacaggagacacgggaatctac
atctctcgcatcgcagaaggtggagcagcacacagagacagcacactgcgtgtgggcgac
agggtgatctctatcaatggtgtagacatgacagaggccaggcatgaccaggcagtagcg
ctccttaccggcacctcccccaccatcgccctcctagtggagcgagacccgaatgcaccg
gggggctctccaggtcaaaaccgggcacgagcccactcccctccacccccagaaccctca
gattcaccagaccaggaggaggacctttcccttcatgggaaccacctgagccaaatggag
gacgagtatcccatcgaggaagtgaccctggtgaagtcaggtggccctcttggcctgagc
atcgtgggtggcagcgatcatgccagccacccattcggcgtcaacgaacccggagtgttc
atctcgaaggtgattcctcacggcctcgcgtgccaaagcggactacgcgtcggggaccga
atattagaggtgaacgccatcgacctgcgtcacgccacacaccaggaagccgtgcgagcc
ctgctggccaacaagcaggagatccgtatgctggtacggagggacccttcaccgcctggg
atgcaggacattatgatccagaagcagccaggggagaagcttggcatcagtattcgcgga
ggggccaagggtcatgcaggaaacccctttgacgccacagatgaaggcatcttcatctct
aaggtgagttcgagtggtgccgcagcaagagacggccggctgcaggttggcatgcgaatc
ctggaggtgaacaaccacagcctgctgggcatgacgcacacggaggcagtgcgagtgctg
cgcgctgtaggagactctctcggcatgctggtgtgtgacggcttcgacccacggaaagtg
gctgccgtggaggcgtctcctggcatcattgccaacccgtttgcaggaggcatcgtgcgt
aaaaacagtatggaaagcatctcttcgatagaccgagacctgagcccagaggagatagac
atcatgcagaaggagtctgagatggtgagagagacatcacagtgggagcgcgaagagatg
gagaaagtggagcgtatgcgtttggagcgagaggaggcaactcgcctgctagaagaggag
accgagaacattggcactggacctctaaaacttgactacaaaaccctggcagcactgccc
accaccagtctgcagaaggttaacagggcgccttcctctgattacaccaggacggacagc
ccgatcagggaagcaccgtactctcccacgatccaaccgcccagccaccactcttctgac
agctccccgtatgcaggcagggagactcgcttcgcaaacattcattacacctccactcct
actgccaaggacgacccttcatcatcaacgcgacccggtgccatccagccagtcggccgc
gtgcggcagagtccctcccccgccaccccggacggccacagtccaaaccccttccagcat
ggcccctcccccttcaactcccagacctctgacctgtatggtgtgaggaacaatttccac
ccaaagcaaccgtctccagagcctgagtggaacaacgaggtgtttgatgatgacatagat
ggtcaggagggagctggtaagggtctgaccaacaagctctccccccgccgggagtatatg
agcctggcagcagtgcctcgactctccaggctttccacggagctgcagactccttctcct
ggtggtaaggacagcccggagcagcgctcctttagggaccgacagaagtattttgagatt
gacgtgaagcagcagacaccggacaaacccaaacctcgggtgtctctagttggagaagat
gacctcaagaaaatgagagaggaagaagagaggaagtttgagcagagggcgcgggagtac
ctgctggatgaagacgaggaggacgaggaggaggatctggttaagcagatggcacagatg
aaggcttctggcaaagtgttgctggacggagtggagtacaaggtggagccagtatccacc
ccatcccagcactgttccacaccaccaagctataacgtcacaccacccagttactgtggc
agctcggggccgtcctctgttgatggtaaagtcgactctcagaggaactcgctggaggac
agcttcaggttggagcagcggccaaactccatgactggtctgatcccggtgtaccccgga
gagtctgcggctcccatccgcacagccaaagcagagcgcagacatcaagagcgactccgt
atgcagagccccgagctggctgtggcccccgacaaggatctgtcccctgctgagaaacga
gctctggaggctgagaagagagccatgtggagggcagcacgaatgaagtctctggagcag
gatgcactgaaagctcagatggtcatcgccaaatctcgggacgggaagaagcgcggcaca
ctagaccagctgacggagtcgccttcacccgcccccacgccctctcccacacccatggaa
gagctcagtcctcgaggtctaacctctccgggcagactgtccctgtcgtcaaagaagttt
gactaccgacagtttgctgccattccttcttccaaacccgtatacgacatccagtcccct
gacacggtcgatgacatgcagttcatcgacgacggctccagcaacccagggcccactgcg
tgccccgaggccgaggtgcccaccgcgctgcctgccacctcagccctggaggagatggct
ctgtacagcaacaagcgcaaactgaggcagggtcgccgcagcctggaaaccgccgtgccc
acgtaa
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