Larimichthys crocea (large yellow croaker): 104933514
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Entry
104933514 CDS
T04659
Symbol
med13
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lco03021
]
104933514 (med13)
Transcription machinery [BR:
lco03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
104933514 (med13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
104933514
NCBI-ProteinID:
XP_010747296
LinkDB
All DBs
Position
XXII:complement(13216307..13282536)
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AA seq
2169 aa
AA seq
DB search
MSSCYVPNGASLEDCHSNLFCLADLTGIKWKRFVWQGPTSAPILFPVTEEDPILCSFSRC
LKADVLSVWRRSQRQGRRELWLFWWGDDPNFADLIHHELAAEDDGLWENGLSYECRTLLF
KAIHNLLERCLMNRSFVRIGKWFVKPYEKDEKPINKSEHLSCAFTFFLHGESNVCTSVEI
NQHQPVYHLTEEHLTLAQQASSPFQVILSPFGLNGTLTGQSFKMSDPPTQKLIEEWNQFY
PISPSAKEGVSEDKVEDMDWEDDSLASVEVLVGGVRMVYPACLVLVPQSDIPVVAPVGSS
HCTAVYPGGHQVPASQREPAMSLVTLTPPTSPEEAQTVDSHSAQKWVKMPSSSDAFSVDR
TSHHGGKIPRRLASQVVERVWQECNINRAQNKRKFSAATNGTCDEELSEKVGAWDFVEHS
QRSYCSCSRYKSVKQRTGSTPGQAQSAGQPSQPPTKHKAGGEKPEKGDKQQKRPQTPFHH
RSLTSDDASIETETTAGQRLSMRGQDGGRFTSIRSADVSAIQKAPQLHSGVVSAGPSEQA
NSPQPPPLSPHPCERSEESGEGMKNPSTPNSQHFYQPPPEPCLVGVKGGGEEPEALNQHF
HSHHPHSHPGGSTYSEPPEPTVYVGAAVNLEEDSSHAPWRLFNLPRRKEAELPTPLLPGD
KLRDEASASQDNLVSVTEVMSTSKWPLKVSEERVQMYRARRNQYLSAAITDGDHEPEVDP
YAFEEGDVKFTFSNKKDKAGGEREPGKKHKGEDGGAGPSDDAQRAAAHNRMASTSLIHET
DLAVSINDLDNLFNSDEDDLAAPGSRRPVNGTDEKFGGKEPKQSTLDPVSCISSADLHQM
FPTPPSLEQHIMGYSPMNMCSKEYGSMEANPGMTTLDGTSSLGGHFKIEVEESFCSPKPS
EIKDYSFVYKPELCQAFVGCSMFAPLKTLPSQCLPPIKIPEDCIYRPSWTMGREMLNPVP
VMTFLNKDSNIPSVGSTMDQDYSQTYTPQTHTPFMSNSAPPSNGGAGILPSPATPRFSAP
TPRTPRTPRTPRGPSSVQGSLKYENSDLYSPASTPSTCRPLNSVEPATVPSIPEAHSLYV
TLILSESVMNLFKDCNFDSCCICVCNMNIKGADVGVYLSDPVSEAQEACSCGFSAVVNRR
YGNGSGLFLEDELDIIGRGSDVSREAEKRFEELRLSSLERTGVGRGDRVPDELILLLQDQ
CTNPFSPISTLEHDIVTRGPSGAPVPPCVRVEERDYHSDCYMALEHGRQFMDNMSGGKVD
EALVKSTCLHHWSKQNAVDVSALCSQDVLRVLMSLQPVLQDAIQKKRTVRSWGVQGPLTW
QQFHKMAGRGSYGTDESPEPLPIPTFLVGYEYDFVVLSPFGLPYWEKLLLDPFGSQRDIG
YLVVCPDNEALLSGAKSFFRDLTAVYESCRLGQHRPISKGYPDGIVLVGGSGAKNLMDQP
VSDWFLKAASGNSDAFTKLKLYAQVCRHNLAPYLASQPLDSSLLTQPSPPPSSSQSSSTQ
LPNSTSSSVSQQGSVNAAGSSIPNNSSSSNSGSANGSASSNSLVTSSGQPGSGMPPAKPN
SFPHFGNMGSQSQGGPQSGQLGQQAGTQNTGTSGDNSNSQAQGPTEPPESTLEREKVGVP
TDGESHAITYPPAIVVYIVDPFSYKEADSGPGPVPAHSSVWTLGLLRCYLEMLQFLPPHI
RNSISVQIVPCQYLLQPVRGEDRHIYAQHLKSLAFSVFAQCRRPLPTSTNVKSLTGFGPG
LAIDTALKSPERPECLRLYTPPFILAPVKDKQTELGETFGEASQKYNVLFVGYCLSHDQR
WLLATCTDLYGELLETCIINIDVPNRARRKKGSVRRLGLQKLWDWCLGLVQMTSVPWRVV
IGRLGRIGHGELKDWSILLSRRNLQSLSRRLKEMCRMCGISASDTPSILSVCLVAMEPQG
SFIIMPDSVSTGSVFGRSTTLNMQTSQLSTPQDTSCTHILVFPTSAFVQVASSNYTNIDP
NIDILNATTDGSDAIGIFDLLDQENELVDPDIINISPTTSPVHSPGSHYHHGGDGSKGQS
TDRMESHEEVPNLLQQPLALGYFVSTAKAGPLPDWFWSACPQAQNQCPLFLKASLHLHVS
SVQSDELLHSKHSHPLDSNQTSDVLRFVLEQYNALSWLTCDPATQDRRSCLPIHFVVLNQ
MYNFIMNML
NT seq
6510 nt
NT seq
+upstream
nt +downstream
nt
atgagttcttgttatgtaccaaacggggccagcttggaggattgccattccaatctattc
tgtctggctgacttgacagggatcaaatggaagaggtttgtgtggcagggtcccacctct
gctcccatcctcttcccggtgacagaagaggaccccatcctatgcagcttcagccgctgc
ctgaaggcggacgtgctgagtgtatggcggcgcagtcagcggcaaggccggagggagctt
tggctcttttggtggggggacgaccccaacttcgcagatctcatccaccatgagcttgca
gccgaggatgacgggctctgggagaacggcctttcctacgaatgtcgcacgctgctgttc
aaagccatccacaacttgctggagcgctgcctcatgaatcgcagcttcgttcgcatcggc
aagtggtttgtcaagccctacgagaaggatgagaagcccatcaacaagagcgagcaccta
tcctgcgccttcactttcttcttgcatggcgagagcaacgtatgcaccagtgtggagatc
aaccagcaccagcctgtctaccatctgacggaggaacacctcactcttgctcagcaggcg
tccagccccttccaagtgatcctgagtcctttcggcctcaacgggacactcactggccag
tcgttcaagatgtcagacccacccacccagaagctgatcgaggagtggaaccagttctat
cccatcagccccagcgccaaggagggtgtgtcggaggacaaggtggaggacatggactgg
gaggatgactctctggcctctgtggaggtcctcgtaggtggtgtgcggatggtgtaccca
gcctgccttgtgctggtacctcagtcagacatccctgttgtggcccctgtggggtcctcc
cactgcactgccgtctacccgggtggccaccaagtgcctgcttcccagcgagagcccgcc
atgtctttggtgaccctcacccctcccacatcgcctgaggaggcacagacagtggactct
cactcggcccagaagtgggttaagatgccttcatcctccgatgcgttcagcgtggacaga
acaagtcaccatggaggcaagattccacgccggcttgccagtcaggtggtggagcgcgtc
tggcaagagtgcaatatcaaccgagcccagaacaagcggaagttctcagctgcaaccaac
ggtacctgtgacgaggagctgagtgagaaagtgggagcctgggatttcgtagagcattca
cagaggtcatactgcagttgttccagatataagtcggtgaagcagcgaacaggcagcacc
ccgggccaagctcagtcagcaggacagccctcccagcctcctaccaagcacaaagccggg
ggagagaagccagagaaaggtgacaagcagcagaaaagaccccagacgcccttccatcat
cgcagtctgaccagcgacgatgcttcaatagagacagagacaacagctggccaaaggttg
tccatgaggggtcaggatggaggaagattcactagtatacgctctgcagacgtgtctgcc
atccaaaaagccccccagcttcacagcggggtggtaagcgctgggccatcggaacaagcc
aactccccccaacctccaccacttagcccccacccctgcgagcgaagcgaagagtcaggg
gagggcatgaagaacccttcaaccccaaacagccaacacttttaccagccacccccagag
ccctgcctggtcggggtgaagggtggcggcgaggagccagaggctcttaatcagcacttc
cactcccatcacccccactcccaccctggaggttcgacatactccgagcctcctgagccc
accgtgtacgtgggcgcagcggtcaacttggaggaggacagctcccacgcaccatggagg
ttattcaacctaccccgaaggaaagaagccgagctgcccacgccactgctgccgggggac
aagttgagggacgaggcctcggcgtcacaggacaacctggtgtcggtcacagaggtgatg
tctacatctaaatggccgctgaaggtgtctgaagaacgcgttcagatgtatcgagccagg
aggaaccagtacctatctgctgccataacggacggcgatcacgagccggaggtggacccc
tacgcctttgaggaaggagacgtcaaattcacattctccaacaagaaggataaggcaggc
ggggagcgtgagccaggcaagaaacataagggtgaagatggaggagcaggcccatcagat
gatgctcagcgggcagctgcacacaaccgcatggcctccacgagcctgatccacgagacc
gacctggcggtgtccatcaacgacctggacaacctcttcaactcggacgaggatgatctg
gcggcgcctggttccaggcgacctgtgaatggaactgatgagaaattcggcggcaaggaa
ccgaagcaatccactttggaccccgtatcctgcattagttcagcagacctgcaccagatg
tttcccacgcctccctccctagagcagcacatcatgggctactcacccatgaacatgtgc
agcaaggagtacggcagcatggaggccaacccaggcatgaccacgctggacggcacctcg
tctctcggaggccacttcaagatcgaggtggaggagagcttctgcagccccaagccttct
gagatcaaggactattcatttgtgtacaagccagagctgtgccaggcgttcgtaggctgc
tccatgttcgcccccctgaagacgttgcccagccagtgtctcccgcctattaaaatacca
gaggactgcatctacagaccaagctggaccatgggcagagagatgctcaaccccgtgcct
gtcatgaccttcctcaacaaagacagtaacatccccagtgtgggcagcaccatggaccag
gactacagccagacctacacccctcagacccacacgcccttcatgtcaaacagcgctcca
ccaagtaacggtggcgctggcatcctaccttcacccgccaccccacgtttctctgcaccc
accccacgtacgccacgcacaccgcgcacacctcgaggcccctccagcgtccagggctcg
ctcaagtatgagaattcggacctgtactcgccagcgtctactccctccacctgccgaccg
ctcaactcagtagagccggctaccgtaccctccatccccgaggcccacagcctctacgtc
accctcatcctctccgagtcggtcatgaacctcttcaaggactgcaactttgacagctgc
tgtatctgcgtatgtaacatgaatataaaaggagctgatgtgggcgtgtacctaagcgac
cccgtcagcgaggcccaggaagcctgcagctgcggcttcagcgccgtggtcaaccgacgt
tacggcaacggctcgggtctcttcctggaggatgagttggatatcatcggccgcggctcg
gatgtcagcagagaggcagaaaaacgatttgaggagctgcggctttcctccctggagagg
actggggttgggaggggcgaccgagttccagatgagcttattctcctcttgcaggaccag
tgtaccaaccctttttctcccatttcaaccctggagcatgacatcgtgacacggggaccg
agcggggctcctgtaccgccctgtgtgagggtggaggagagggactaccacagcgactgc
tacatggccctggagcacggcaggcagttcatggacaacatgtcaggcggcaaggtggac
gaggcacttgttaaaagcacctgcctgcaccactggtccaaacaaaacgcagtggacgtg
agtgcgctgtgctctcaggacgtgctgcgggtgctgatgtccctccagcccgtactccag
gacgcaatccagaagaagaggacagtaaggtcgtggggcgttcagggtcccctcacctgg
cagcagttccacaagatggctggacggggctcttatggcacagacgagtccccagagccc
ctgcccattcccaccttcctggtgggttatgagtacgactttgtggtgctgtctccgttc
ggtctgccgtactgggagaaactcttgctggatcccttcggctcccagcgggacatcggg
tacctggtggtttgtcctgacaacgaagccctgctcagcggtgccaagagcttcttccga
gacctcaccgctgtctacgagtcatgtcgacttggccagcaccggcccatttccaaaggc
taccccgatggcatagtactcgttggcggcagtggagccaagaacctcatggatcagcca
gtcagcgactggttcctcaaggctgccagcggcaacagcgacgccttcactaagctcaaa
ctctatgcacaagtgtgccgccacaacctcgctccatacctcgcatcacagccattggac
agttccctcctcacacaacccagtcccccgccttcgtccagccagtcatcatccacacaa
ctgcctaactccacctccagctcagtcagccagcagggatcagtgaacgctgcgggctcc
tccatccccaacaacagcagcagcagcaacagtgggtctgcaaatggctctgcgtcatcc
aacagcctggtgacatcctcaggccagcctggcagcggcatgcctcctgccaagccaaac
tcttttccccactttgggaacatggggagccagagccagggagggccccagagtggacag
ctgggacagcaggctggtacccagaatactggcacctcaggggacaactccaacagccag
gcccaggggcccacagagcctcctgaaagcactttggaacgagagaaggtaggcgtgccc
acggacggggagtcccacgccatcacgtacccgcctgccatcgttgtttacatcgtggac
ccctttagctacaaggaggccgacagtggccccgggccagtgcctgcccactccagtgtg
tggacgctgggtttgctacgctgctatcttgagatgcttcagttcctgcccccacacatc
cgcaattctatatctgtacagatcgtcccctgccagtacctgcttcagccagtacgagga
gaagaccgtcacatctacgcccagcacctcaagtctctagccttctccgtctttgctcag
tgcagacggccgctgcccacctccaccaacgtcaagtcgttgacaggcttcggcccgggc
ttggccattgacactgcactgaagagtccggagcggccggagtgtctacgtctgtataca
cctccgttcatcctagcgccggtgaaggacaagcagacggagctcggggagacattcggg
gaggcatcgcagaaatacaacgtgctgtttgtcggatactgtctgtcccacgaccaacgc
tggctcctggctacgtgcactgacctgtatggggaactcctggagacctgcatcatcaac
atagatgtacccaacagggcacggaggaaaaagggctccgttcggcggctcggcctgcag
aagctgtgggattggtgcttgggactggtgcagatgacatcagtcccctggagggtggtg
attggcagactgggaaggataggacacggagagttaaaagactggagtattctgctgagc
aggagaaacctccagtcactgagtcgtcgtcttaaggaaatgtgtcgaatgtgtggcatc
tccgcctcggatactcccagcatcctcagcgtgtgcttggttgccatggagccccaggga
tcctttatcatcatgccagactccgtgtcaaccggctcagtatttggccgcagcaccacc
ttgaacatgcagacgtcccagctgagcacaccacaggacacctcctgcacccacatcctg
gtcttccccacctccgccttcgtccaggtggccagctccaattacaccaacatcgacccc
aacatcgacattctcaacgccaccactgatgggtctgacgctatcgggatctttgacctg
ctggaccaggagaacgagttggtggacccagacatcatcaacatctcgcccaccacgtca
ccggtacactcccctggctctcattaccaccacggaggtgatggcagtaagggacagagt
acggaccgcatggagtctcatgaagaggttcctaacctcctgcagcagcccttggccctc
ggctacttcgtctcaacggctaaagctggtccactacccgactggttctggtcggcctgt
cctcaggctcagaaccagtgtccactcttcctcaaggcctctttgcacctccatgtgtct
tcagtgcaatcagatgaactactgcacagcaaacactcccaccccctagactccaatcag
acctcagatgtactcagatttgtgctggagcagtacaacgccctctcctggctgacgtgt
gatccggctacacaggacagacgatcatgtctacccattcattttgtggtgctcaaccag
atgtacaacttcatcatgaacatgttgtaa
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