Larimichthys crocea (large yellow croaker): 104933630
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Entry
104933630 CDS
T04659
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent T-type calcium channel subunit alpha-1I
KO
K04856
voltage-dependent calcium channel T type alpha-1I
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04010
MAPK signaling pathway
lco04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lco04040
]
104933630
Ion channels [BR:
lco04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
104933630
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GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
104933630
NCBI-ProteinID:
XP_027145647
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Position
XVII:complement(4971228..4984765)
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AA seq
1353 aa
AA seq
DB search
MVHNPNPVPRDDEYLPYPALAPVVFFGIKQTTRPRNWCLKVACSLWLEYVSKLMALLSCA
IVCMYKPYEEPSNLLKILEPLTFSFFMVEMLLKMLALGVFGYQGSYLSNNWNKFDVFINT
VNAVDYVLAFLGINWQISKSLEPMRLIGRISSMRALMKVLLDMMPMLINVFILYFFIINV
FAVVGVQLWAGKLRNRCFLGEDIIGKYNVSMSPFYEPEDSERYPFICSLGKHGMRRCSGV
PPSRDNGKLCSVAAPDNASAASHSFRMVGDVSTEECINWHMYYNVCRTGNHNPHRGAVNF
DNIGYAWMTIFQVVMLEGWTEIMFYVMDAHSFWSFVILIPVTIMGSFVMMNVCAVVIVNQ
FTESAQRDTGQRGAGAASIAWLCYMLTSSLRVISSIYNSRRHNTVQPQDSMEGSLMVHIW
APFKRKLKYIVDSKLFTQGIMFAIFFSVVSMAIEHHGQSKELTQMLQVTNIVFIIIFIVE
MAMKLLVLSGAYFWDPNNVFDFVIVISSVWEVIAKADSRLSILRVFRLLRFVRLVKFLPH
LKRQLLVLKRTIQEAAVLCGLLLVGILVFSVLGMQLFGNKFSFQTKNGVTVADRKNFDSI
LWSMVTVFQVLTMEDWNLVLYNAMSATSPWAALYFVGLIVLEKHILLNILMGIVVESFQE
KCTSSPLSSCTNLAHLSPSDNNEENDPMRPDCSPSGHSSTEMNTEEETGTNEIVRVQELI
LEIFEPDTESAPLVQRAXRLTLYILSPQNRLRVCCQRFISHVMFDRVILFFILLNCVTIA
MERPGISPESGERWIIDISCYVFSTIFPIEMLIKVLAHGLVFGKETYCRSPWNAVDGLLV
VLSVVDTIVSLTSSGKNNKLGILKVLRLLRTLRPLRVIKRAPKLKLAVEALIASIKPIGN
IVLICCAFFLFYGILGVQLFKGKFFYCAGQDTRNITSKSECLSADYQWVRKTYHFDNLPQ
ALLSLFVMFSKDSWVNIMYDGLDAVEVDKQPVQNHNEWMLLFFISFMIISFVLLDMFIGV
MVDTFRQCQQEQKIKDEWLREEEDQTQVECGEPVQPYYTHYSHMRQLIYDLCVSDFLEYF
MTAIVCISVLMMAFEHYNQPEYIEKLVEYFFYVFTAILLMEILLKLVAFGVLRFFKMRWN
LLDVGVALISIISIVVDKTKAHVIPINPSILRVCRVLRLAQVLKAKRLRLLLRTIIKTLS
HVENICLLFMFFFFIYAVLAVELFGRLSCSDHNPCHGLHRYANFRHFGMALLTLYQVCTG
DNWSGIMRDTLRLCRPGDDGCLSYLHWASPIWFTSFVVMGQFMLVNLVVATIMQALEESN
ENKAINLPPQEGEAEHDTVRSLQDSESDTEEGS
NT seq
4062 nt
NT seq
+upstream
nt +downstream
nt
atggttcataacccaaaccctgtccccagggatgacgagtatttgccctacccagccttg
gcccccgtggttttctttggcataaaacaaaccacaagaccccgtaactggtgtctgaaa
gttgcctgcagcttatggttggaatatgtatccaaactgatggcgctgctcagctgtgcc
attgtgtgcatgtacaagccctatgaggagccctcaaacctacttaagatcttggagcct
ctgacattcagcttcttcatggtggagatgctcttgaagatgctggccctgggagtcttt
ggctatcaaggaagttacctaagcaacaactggaacaagtttgacgtcttcatcaacact
gtgaatgcagtagattatgttctggctttcctcggcatcaactggcagatctctaaatcg
ctggagccaatgcgtctgattggcagaatatcgagtatgcgagccttgatgaaagtcctc
ctagacatgatgcctatgctcataaatgttttcatcctctacttcttcatcatcaacgtc
tttgccgtcgtgggagtccagctgtgggcagggaagctgcgcaatcgctgcttcctggga
gaggacattatcgggaagtacaatgtgtccatgagtccattctacgagcccgaggacagt
gaaagataccccttcatctgttcacttggcaagcacgggatgcggcgctgcagtggtgta
ccgccttccagagacaatggcaaactctgctcagtggctgctcctgacaatgcttcagct
gcaagtcactccttcaggatggtcggtgatgtcagtactgaagaatgtattaactggcac
atgtactacaatgtctgtcgcaccgggaatcacaaccctcacaggggagccgtcaacttc
gacaacatcggctacgcctggatgaccatattccaggttgtcatgctggagggatggaca
gagattatgttttatgtcatggacgcacattccttttggagttttgtcattctcatacct
gtcaccattatgggctccttcgtcatgatgaacgtgtgtgcagtcgtcatcgtcaaccag
ttcacggagagcgcacagagggatacgggacagcggggtgctggtgctgcgtccatcgca
tggctctgttacatgttgacctcctctctgcgggtcatctcctctatatacaacagtagg
cgacataacacggtgcagcctcaggacagcatggagggttccttaatggttcacatctgg
gcgccgttcaagagaaaactgaagtacatcgtggacagtaagctgttcacccaagggatc
atgtttgccattttcttcagcgtggtctccatggccatagagcaccacgggcagtctaag
gagctgacacagatgctacaggtcactaacatcgtcttcatcatcatatttatcgtggag
atggccatgaagctgctggttctctcaggagcgtacttctgggacccaaacaatgtcttt
gactttgttatcgtcatcagcagtgtgtgggaggtgatcgctaaagccgacagcaggttg
tccattctgcgtgtgtttcgtctgctgcggttcgtgaggctggttaaattcctccctcac
ctgaagagacagctgctcgtgctgaagaggaccatacaggaggccgccgtgctctgtggg
ctgctgctcgttggcatactggtttttagtgtgctgggtatgcagctgttcgggaataaa
ttcagcttccagacaaagaatggagtcaccgtcgctgatcgaaaaaactttgacagcata
ctctggtccatggtcactgtgttccaggttttgactatggaggactggaatctggtgcta
tacaacgccatgtccgccacctcaccctgggctgctctctactttgtcgggctcattgtg
ttggaaaaacatattcttctcaatatactcatgggcatagtggttgagagcttccaggaa
aagtgcaccagctcccctctctcttcctgcaccaatctggctcacttgagcccttcagac
aacaatgaggagaatgaccccatgagaccggactgctccccctccggtcatagctccact
gagatgaacacagaggaagagacaggcaccaatgagatcgtcagagtgcaagagttaata
ttggagatttttgaaccggatacagagagtgctccgctggtgcaaagagcatgaagacta
acactgtacatactgtctccacagaacaggctgcgtgtctgttgccaacgttttatctct
cacgtgatgtttgaccgcgtcattctgttcttcattctcctcaattgtgtcaccattgct
atggagagacctggaatatcccctgaaagtggggagcgatggatcattgatatatcctgt
tacgtgttctccaccatcttccctatagagatgcttatcaaggtcctggctcacggtttg
gtgtttggcaaggagacctactgccgctctccctggaatgctgtggatggtctgctggtg
gttctgtctgtagtcgacaccattgtctctctgaccagcagcggcaagaataataagctg
ggaatcctcaaagttttgcgcctgctgcgcacacttcgcccactgagggttatcaagcga
gcaccgaaactgaagttggccgtggaagctctgatcgcctcaattaaacccatcgggaac
atcgttctcatctgctgtgccttcttcttgttctatggcatcctcggtgtgcagctgttc
aaagggaagttcttctactgtgcgggtcaggacacaagaaacatcaccagcaagtctgag
tgcctgtcagccgactatcaatgggtccgaaagacgtaccacttcgacaacctgcctcag
gctctgttgtccttgtttgtaatgttctctaaggacagctgggtgaacatcatgtacgat
ggactggatgctgttgaagtagacaaacagcccgtgcagaaccacaatgagtggatgctc
ctttttttcatctccttcatgatcataagctttgttctgctcgacatgttcatcggcgtg
atggtggacaccttccgtcagtgtcagcaggagcagaaaatcaaagacgagtggttacga
gaagaagaagaccaaacgcaggtggagtgcggcgagcctgtgcagccgtattacacacac
tactctcacatgcgtcagttaatctatgatctgtgtgtcagcgacttcctggagtacttc
atgacagccatagtttgcatcagtgtgttgatgatggctttcgaacactataatcaacct
gagtatatagagaaacttgtagagtatttcttctatgtgttcaccgccatcctgttaatg
gagatcctgctgaagctcgtggcatttggcgtcctgaggttctttaaaatgaggtggaat
cttctggacgttggtgtcgccttgatttccatcatcagcattgtcgtggacaagacaaaa
gcacatgtaattcccattaatcccagcatcctgagagtctgcagagtactccgactagca
caagtgctgaaggccaaaaggctcagacttctgctgagaaccatcatcaagacgttatca
catgttgaaaacatttgtctgctcttcatgttcttcttcttcatctacgctgtgctggca
gtggagctctttggcaggctttcatgcagcgaccataacccgtgtcacggtttacatcgg
tatgccaacttcaggcattttgggatggccctgctgacgctctaccaagtgtgcaccgga
gacaactggagcgggattatgagagacacgttgaggttgtgtcgtcctggtgacgatggc
tgccttagttacctgcactgggcctctcccatctggttcaccagctttgtggtcatgggg
cagtttatgctggtcaacctggtggtggcaacgatcatgcaagctctggaggaaagcaac
gagaacaaggccattaacctcccaccccaggaaggggaagcagaacacgacactgtccgc
agcctccaggacagtgagtcagacactgaagaaggaagctga
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