Larimichthys crocea (large yellow croaker): 104933642
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Entry
104933642 CDS
T04659
Name
(RefSeq) netrin-1
KO
K06843
netrin 1
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
104933642
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
lco00536
]
104933642
Glycosaminoglycan binding proteins [BR:
lco00536
]
Heparan sulfate / Heparin
Axon guidance molecules
104933642
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Ortholog
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Motif
Pfam:
Laminin_N
EGF_LMN_ATRN
EGF_laminin
BNR_6
Motif
Other DBs
NCBI-GeneID:
104933642
NCBI-ProteinID:
XP_027138516
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Position
X:7621876..7662039
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AA seq
606 aa
AA seq
DB search
MIRVVDFVLTALLAASLSCRSALGGYGMSLFAAQTSPPDPCYDEHGNPRRCIPDFVNSAF
GKEVKVSSTCGKAPGRYCVVTAAEKGDERTRNCHTCDASDPRKYHPPAYLTDLNNPHNLT
CWQSENFVQFPQNVTLSLSLGKKFEVTYVSLQFCSPRPESMVIYKSMDYGKTWVPFQFYS
TQCRKMYNKPNRAVITKQNEQEAVCTDSHTDMHPLTGGLIAFSTLDGRPSAHDFDNSPVL
QDWVTATDIKVIFSRLHTFGDENEDDSELARDSYFYAVSDLQVGGRCKCNGHASRCVKDR
DESLVCECKHNTAGPECDRCKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELYK
LSGRKSGGVCLNCRHNTAGRHCHYCKEGYYRDLSKPISHRKACKACDCHPVGAAGKTCNQ
TTGQCPCKDGVTGITCNRCAKGYQQSRSPIAPCIKIPVVPPTTPSSSTEEPSDCDSYCKA
SKAVKLNMKKYCRKIIAVQVHILKADKAGEWWKFTVNIISVYKQGESRIRRGDQFLWVRA
KDVACKCPKIKPGKKYLLLGNDEDSPGQGGGVVADKGSLVIQWRDTWARRLRKFQQREKK
GKCKKP
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgatccgggttgtggatttcgtgctgaccgcgctgctcgccgcgtccctgtcgtgccgg
agcgcgctcggcgggtacgggatgagcctgttcgcggcgcagacctctcccccggacccc
tgctacgacgagcacggcaacccgcgccgctgcatcccggacttcgtcaactccgccttc
gggaaggaggtgaaggtgtccagcacctgcgggaaggcgcccggccggtactgcgtggtg
acagcggcggagaaaggagacgagcggacccggaactgtcacacctgcgacgcctcggac
cccagaaagtaccacccccccgcgtacctgacggacctcaacaacccgcacaacctcacc
tgctggcagtccgagaacttcgtccagttcccgcagaacgtcacgctcagcctgtcgctc
gggaagaagttcgaggtgacctacgtgagcctgcagttctgctcgcctcgacccgaatcc
atggtgatctacaagtccatggactacggcaagacctgggtccccttccagttctactcg
acccagtgcaggaagatgtacaacaagccgaaccgggccgtcatcacgaagcagaacgag
caggaggccgtgtgcacggactcccacaccgacatgcacccgctgaccggcggcctcatc
gccttcagcacgctggacgggagaccgtccgcgcacgacttcgacaactccccggtgctg
caggactgggtcacggccaccgacatcaaagtcatcttcagccggctgcacacgttcggc
gacgagaacgaggacgactcggagctggcccgggactcgtacttctacgcggtgtcggac
ctgcaggtcggggggagatgcaaatgcaacgggcacgcgtcccggtgcgtcaaggaccgg
gacgagagtctggtctgtgagtgcaaacacaacacggccggaccggagtgcgacaggtgc
aaaccgttccactacgaccgaccgtggcagagagccacagcccgggaggccaacgagtgt
gtcgcctgtaactgcaaccttcacgcccggaggtgtcgcttcaacatggagctgtacaag
ctgtcagggaggaagagcggcggagtctgcctcaactgtcgccacaacacggccggacgc
cactgccactactgcaaggagggctactacagagacctgtccaagcccatctcgcacagg
aaggcctgcaaagcatgtgattgccatccggtgggtgctgctggcaaaacctgtaaccaa
accacaggacaatgtccctgtaaagacggcgtgactggtatcacatgcaaccgctgcgct
aaaggctaccagcagagccgctcgcccattgccccctgcataaagattccagtcgtgcct
ccgacgactccatcgagcagcacggaggagccgtcagactgtgactcgtactgtaaggcg
tccaaggcagtgaagctcaacatgaagaagtactgcagaaagattatcgccgtccaggtt
cacatcctgaaggcggacaaagctggcgagtggtggaagttcaccgtcaacatcatctcc
gtctacaagcagggcgagagccgaatccgccgcggggaccagttcctgtgggtccgcgcc
aaagacgtggcctgcaagtgccccaagattaaacccgggaagaagtacctgctgctgggg
aacgacgaggactcccccgggcagggcggcggagtggtggcggacaaaggcagcctggtt
atccagtggagggacacgtgggcgcgcaggctgaggaagttccagcagcgcgagaagaaa
ggcaagtgtaagaagccatag
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