Larimichthys crocea (large yellow croaker): 104933647
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Entry
104933647 CDS
T04659
Symbol
rnps1
Name
(RefSeq) RNA-binding protein with serine-rich domain 1
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03013
Nucleocytoplasmic transport
lco03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104933647 (rnps1)
03015 mRNA surveillance pathway
104933647 (rnps1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lco03019
]
104933647 (rnps1)
Messenger RNA biogenesis [BR:
lco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
104933647 (rnps1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
104933647
NCBI-ProteinID:
XP_010747451
UniProt:
A0A6G0HVJ4
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All DBs
Position
XII:24011008..24014223
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AA seq
280 aa
AA seq
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MAPSPTKRKEEEKTKDRGKEKTGAKEGDKERGREKVRKRRSASTGSSSSRSRSSSTSSSS
SGSSSGSSSGSSSSGSSRSGSSSSRSSSSSSSSGSPSPSRRRHDNRRRSRSASKTQKRGD
DKERRKRSPSPKPTKVHLGRLTRNVTKDHIQEIFSTYGKIKMVEMPMDRLHPHLSRGYAY
VEFETPDEAQKALKYMDGGQIDGQEITASAVLAQRVRPPPRRPSPPRRMPPPPPMWRRSP
PRMRRRSRSPRRRSPARRRSRSRSPGRRRHRSRSSSNSSR
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atggcaccatcacccacaaagcggaaggaggaggaaaaaacaaaagacagaggcaaagaa
aagactggtgccaaggaaggagacaaggagagaggacgggagaaagtgaggaaacgccgc
agtgcttctactggcagcagcagcagcaggtccagatctagctctacttcaagcagcagc
tcaggttccagctcaggttcctcaagtggatccagctcatctggttccagccgctctgga
tcttcaagctctcgttcctcctcctcctccagctcctcaggctcccccagccccagccgt
agacgccatgacaaccgccgccgctcccgctcagcgtccaaaacacagaaaaggggagat
gacaaggagcgaagaaaaagaagcccaagccccaaaccaactaaagtccatttagggcgg
ctgaccaggaatgtcactaaggaccacatccaggaaatcttttccacttatggaaaaatc
aaaatggttgaaatgccaatggacaggctccacccacacctgtccaggggttatgcctat
gtggagtttgagactcctgatgaggctcagaaggccctcaagtacatggatggaggtcag
attgatggacaggaaatcactgcatctgctgtgcttgctcaacgagtccggcctccacct
cgaagaccttctccaccacgcagaatgcccccaccaccacctatgtggcgccgcagtcca
ccgcgcatgagaagaaggtcccgctccccaaggagacgctccccagcacgccgccgatct
cgctccagatctcccggccgcaggcgtcaccgctctcgttccagctctaactcctccaga
tag
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