KEGG   Larimichthys crocea (large yellow croaker): 104933657
Entry
104933657         CDS       T04659                                 
Symbol
sf3a1
Name
(RefSeq) splicing factor 3A subunit 1 isoform X1
  KO
K12825  splicing factor 3A subunit 1
Organism
lco  Larimichthys crocea (large yellow croaker)
Pathway
lco03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lco00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104933657 (sf3a1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lco03041]
    104933657 (sf3a1)
Spliceosome [BR:lco03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    104933657 (sf3a1)
 Complex B
    104933657 (sf3a1)
 Complex C
   U2 SnRNP specific factors
    104933657 (sf3a1)
SSDB
Motif
Pfam: Surp PRP21_like_P ubiquitin Rad60-SLD Ubiquitin_2
Other DBs
NCBI-GeneID: 104933657
NCBI-ProteinID: XP_010747463
UniProt: A0A0F8BDG8
LinkDB
Position
III:complement(2138365..2153481)
AA seq 784 aa
MPPGPVQIVQPESNNKNDAVDETPATKPIVGIIYPPPEVRNIVDKTASFVARNGPEFEAR
IRQNEINNPKFNFLNPNDPYHAYYRHKVNEFKEGKAQEPSAAVPKVMQQAMQQSQQLPQK
VQSQVIQETVVPKEPPPEFEFIADPPSISAFDLDVVKLTAQFVARNGRQFLTQLMQKEQR
NYQFDFLRPQHSLFNYFTKLVEQYTKILIPPKGLLTKLKREAENPREVMDQVRYRVEWAK
FQERERKKEEEEREKERVAYAQIDWHDFVVVETVDFQPNEQGHFPPPTTPEELGARILIQ
ERYEKYGESEEVEMEVESEDDDDDREDRNNGQPSQPDQDTQVQDMDEGSDDDDDGMKAPL
PPDNPMPPPLPPTPDQVIIRKDYDPKASKPQPSVAAPDEYLISPITGEKIPASKMQEHMR
IGLLDPRWLELRDRTIRERQTEDEVYAPGLDIESSLKQLAERRTDIFGVEETAIGKKIGE
EEIQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVGEDDTKEKIGPSKP
SEIHHQPPMPSSSSILPKPSPPITSVPRPPSTLAPQVRTTLLSAVPVIPRPPVSPVVHLA
PGQVIASMPRMISAPRINVVPMPPSAPHIMAPRPPPMVVPAAFVPAPPVPQPPSSAPAPP
SHPPPPHDDEPVSKKMKTEDNLIPEEEFLRRNKGPVAVKVQVPNMQDKTEWKLNGQVLNF
TVPLTDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMNNGSIIHLALKERG
GRKK
NT seq 2355 nt   +upstreamnt  +downstreamnt
atgccgcccgggcctgttcagatcgttcagccggagtccaacaacaagaacgatgccgtt
gatgaaaccccagctactaaacccatcgttggtatcatttatccacctcctgaggtccga
aacatagtcgacaagacagccagttttgtcgccaggaacgggcctgagtttgaagcaaga
atccgtcagaatgagatcaacaacccaaagtttaatttcctcaaccctaatgacccgtac
catgcctactaccgccacaaggtcaatgagttcaaggaggggaaagcacaggagccgtct
gcggccgtgcctaaggttatgcagcaggccatgcagcagtcccaacagcttcctcaaaaa
gttcagtcacaggtgattcaagagacagttgtccccaaagagccgcctcctgagtttgag
ttcattgcggatcctccgtcaatctccgcattcgatctggatgtcgtgaagctcacagcc
cagtttgtcgctcgtaacggccgccagtttctcactcagctcatgcagaaagaacagagg
aactaccagtttgactttttgcggccgcagcacagccttttcaactatttcaccaaactg
gttgagcagtacacaaagattctgatccctcccaaaggcctcctgaccaagctgaagaga
gaagctgagaatccaagagaggttatggaccaggtgaggtaccgtgttgagtgggcgaag
ttccaggagcgtgagagaaagaaggaggaggaggaaagagagaaagaacgtgtggcgtac
gcccaaatcgactggcatgacttcgtagtggttgagacggtggatttccagcccaacgaa
caaggccacttccccccgcctaccacaccagaggagctcggcgcccgcatcctgatccaa
gagcgctacgagaagtacggagagagcgaggaggtggagatggaggttgagagcgaggat
gacgacgatgaccgggaggataggaacaacgggcagccttcacagcctgatcaggacaca
caagtgcaggacatggacgagggatctgatgatgatgatgatggcatgaaggctccactg
ccaccagacaaccctatgccacccccactgcccccaactccagaccaggttattattcgc
aaagactacgaccccaaagcttccaagcctcagccctcagttgcagctccggatgagtac
ctcatctcaccaattaccggtgagaagatcccagccagtaagatgcaagagcacatgcgt
atcggtctcctggatccacgctggctggagctcagggaccgcactatcagagagaggcag
actgaggacgaagtctacgctcctggtttggatatcgagagcagcttgaagcagctggct
gagaggcgtaccgatatcttcggtgtggaagagacggccatcggtaagaagatcggagaa
gaagaaatccagaagccagaggagaaggtcacttgggatggacactctggaagcatggct
cgtacccagcaggcagcgcaggccaacatcaccctgcaggagcagatcgaagccattcac
aaggccaaaggactggtgggagaggatgacactaaggagaaaatcggcccgagcaagccg
agtgagatccatcaccagcctccgatgccctcgtcttcgtccattttgcctaaacccagt
cctccaatcacatcagtgcctcgcccaccttccactctggcacctcaagtgcgcaccact
ctgctgtctgctgtccctgtgataccgagaccgcccgtgtctcctgtggtgcaccttgca
ccaggacaggtcatagcatcaatgcctcgtatgatctctgctccccgcatcaacgtggtc
cccatgccaccgtcagcgcctcacattatggcgcccagaccacctcccatggttgtgcca
gctgcgtttgttcccgctccaccagtaccacaaccgccgagctctgctcctgcaccgcca
tcccacccacctccacctcatgatgatgagccagtcagcaagaagatgaagacagaggac
aaccttattccagaggaggagttccttcgtagaaataagggtcctgtggcggttaaagtt
caagtacccaacatgcaggacaagaccgaatggaagctgaatggccaagtgctgaatttc
actgtcccactcacagatcaggtgtctgtcattaaagtcaaaatccatgaagctaccggc
atgccagcagggaaacagaagttgcagtatgagggtattttcatcaaggattccaactct
ctggcttattacaacatgaacaacggttcgatcatccacttggcgctgaaggagagaggt
ggaagaaagaagtga

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