KEGG   Larimichthys crocea (large yellow croaker): 104933698
Entry
104933698         CDS       T04659                                 
Name
(RefSeq) LOW QUALITY PROTEIN: charged multivesicular body protein 4b
  KO
K12194  charged multivesicular body protein 4A/B
Organism
lco  Larimichthys crocea (large yellow croaker)
Pathway
lco03250  Viral life cycle - HIV-1
lco04144  Endocytosis
lco04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:lco00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    104933698
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    104933698
  09143 Cell growth and death
   04217 Necroptosis
    104933698
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lco04131]
    104933698
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lco04147]
    104933698
Membrane trafficking [BR:lco04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    104933698
Exosome [BR:lco04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   104933698
  Exosomal proteins of other body fluids (saliva and urine)
   104933698
  Exosomal proteins of colorectal cancer cells
   104933698
SSDB
Motif
Pfam: Snf7 SYF2 DUF6437
Other DBs
NCBI-GeneID: 104933698
NCBI-ProteinID: XP_027134832
LinkDB
Position
VI:21961084..21971971
AA seq 220 aa
MSPFGKLFGGXGKGGKSPTPQEAIQRLRETEGXVARTGVLEKKIDRELMTAKKNGTKTNE
RAALQALKRKKRYEKQLDQIDGTLSTIEFQREALENANTNTEVLKNMGFASEALKAAHQH
MDIDKVDDLMADITEQQEVAQEISDVISRPIGFGQEFDEDELLAELEELEQEELDKNLLE
IEGTEDLPSVPSTSLPSKPVKKKEEEDEDDMADLEAWAAN
NT seq 663 nt   +upstreamnt  +downstreamnt
atgtcaccgttcggtaagttgttcggcggcncagggaagggcgggaaatcaccgaccccg
caggaggcgatccagcggctgagggagaccgaggganntgtggcgagaacaggagttctt
gagaagaagatcgaccgagagctcatgacggcgaagaagaacggcacgaaaacaaacgag
agagctgctctacaggccttgaagaggaaaaagcgttacgagaagcagctggatcagatc
gatgggacgctgtcgaccatcgagttccagcgggaggcgttggagaacgccaacaccaac
acagaagtgctcaagaacatgggctttgcttccgaggcgctgaaggccgcacaccaacac
atggatatagacaaagtagacgacctgatggcagacatcacagaacaacaggaagtggct
caagaaatctcggatgtcatttccagaccgatcggtttcggacaagagttcgacgaggac
gagcttctggctgagctggaggagctggaacaggaagagctggacaagaatctcctggaa
atcgaaggaacggaggatctccccagcgtaccatcgacatcactaccatctaaaccagtc
aagaagaaggaggaagaagacgaagacgacatggcggacctcgaggcctgggcggctaac
taa

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